Gene: DCAR_017367

General Information

Structural Information

  • Species Daucus carota
  • Gene Identifier DCAR_017367
  • Transcript Identifier DCAR_017367
  • Gene Type Coding gene
  • Location DCARv2_Chr5 : 16069405-16078951 : positive

Gene Family Information

  • ID HOM05D005687
  • #Genes/#Species 136/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 36075093
  • id DCAR_017367.v1.0
  • uniprot A0A162A063

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006400
IEA
GOA DatabasetRNA modification
GO:0006400
IEA
InterProtRNA modification
GO:0035600
IEA
GOA DatabasetRNA methylthiolation
GO:0035600
IEA
InterProtRNA methylthiolation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051536
IEA
GOA Databaseiron-sulfur cluster binding
GO:0051536
IEA
InterProiron-sulfur cluster binding
GO:0035596
IEA
GOA Databasemethylthiotransferase activity
GO:0035596
IEA
InterPromethylthiotransferase activity
GO:0035598
IEA
GOA DatabaseN6-threonylcarbomyladenosine methylthiotransferase activity
GO:0035598
IEA
InterProN6-threonylcarbomyladenosine methylthiotransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016740
IEA
InterProtransferase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0051539
IEA
GOA Database4 iron, 4 sulfur cluster binding
GO:0051539
IEA
InterPro4 iron, 4 sulfur cluster binding
GO:0061712
IEA
GOA DatabasetRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT1G72090
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013848 Methylthiotransferase, N-terminal
IPR007197 Radical SAM
IPR006466 MiaB-like tRNA modifying enzyme, archaeal-type
IPR038135 Methylthiotransferase, N-terminal domain superfamily
IPR005839 Methylthiotransferase
IPR006638 Elp3/MiaB/NifB
IPR023404 Radical SAM, alpha/beta horseshoe
Mapman id Description
16.5.6.1 RNA processing.RNA modification.methylthiolation.tRNA methylthiotransferase