Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO196G0248 Selaginella moellendorffii HOM05D004747 ORTHO05D006051 3.6e-85 318.2 156 100.0
Mapoly0005s0256 Marchantia polymorpha HOM05D004747 ORTHO05D006051 1.2e-69 266.5 155 83.9
Pp3c11_26490 Physcomitrium patens HOM05D004747 ORTHO05D006051 2.6e-67 258.8 155 80.0
Pp3c7_6390 Physcomitrium patens HOM05D004747 ORTHO05D006051 3.4e-67 258.5 155 80.6
Gorai.011G101900 Gossypium raimondii HOM05D004747 ORTHO05D006051 1.4e-65 253.1 155 76.8
HPP92_014469 Vanilla planifolia HOM05D004747 ORTHO05D006051 1.9e-65 252.7 155 78.7
ATR0733G064 Amborella trichopoda HOM05D004747 ORTHO05D006051 3.2e-65 251.9 155 78.7
CiPaw.01G036600 Carya illinoinensis HOM05D004747 ORTHO05D006051 5.4e-65 251.1 155 79.4
Gohir.D10G092700 Gossypium hirsutum HOM05D004747 ORTHO05D006051 5.4e-65 251.1 155 76.1
GSVIVG01018981001 Vitis vinifera HOM05D004747 ORTHO05D006051 9.3e-65 250.4 155 78.7
Gohir.A10G095200 Gossypium hirsutum HOM05D004747 ORTHO05D006051 1.2e-64 250.0 155 75.5
MBI16_g37699_MAGBIO Magnolia biondii HOM05D004747 ORTHO05D006051 1.2e-64 250.0 156 78.2
Dinv39972 Davidia involucrata HOM05D004747 ORTHO05D006051 1.6e-64 249.6 146 80.1
Eucgr.H01267 Eucalyptus grandis HOM05D004747 ORTHO05D006051 1.6e-64 249.6 155 78.7
Sabra07G0023600 Salix brachista HOM05D004747 ORTHO05D006051 2.7e-64 248.8 146 79.5
TAR376G1008 Trochodendron aralioides HOM05D004747 ORTHO05D006051 2.7e-64 248.8 155 78.1
Manes.02G092600 Manihot esculenta HOM05D004747 ORTHO05D006051 3.5e-64 248.4 145 81.4
TAR628G1004 Trochodendron aralioides HOM05D004747 ORTHO05D006051 4.6e-64 248.1 155 78.7
CBR_g28042 Chara braunii HOM05D004747 ORTHO05D006051 6.0e-64 247.7 154 77.9
Potri.007G026900 Populus trichocarpa HOM05D004747 ORTHO05D006051 6.0e-64 247.7 145 80.0
Thecc.01G037400 Theobroma cacao HOM05D004747 ORTHO05D006051 1.3e-63 246.5 155 74.8
Atru.chr3.560 Acer truncatum HOM05D004747 ORTHO05D006051 2.3e-63 245.7 155 78.7
Lsat_1_v5_gn_2_76601 Lactuca sativa HOM05D004747 ORTHO05D006051 3.0e-63 245.4 156 76.3
Ciclev10025502m.g Citrus clementina HOM05D004747 ORTHO05D006051 3.9e-63 245.0 155 78.1
Phvul.002G029300 Phaseolus vulgaris HOM05D004747 ORTHO05D006051 5.1e-63 244.6 155 77.4
Duzib264G0087 Durio zibethinus HOM05D004747 ORTHO05D006051 6.6e-63 244.2 155 74.8
unitig_21.g20956 Utricularia gibba HOM05D004747 ORTHO05D006051 6.6e-63 244.2 155 76.1
CDE03G0295 Ceratophyllum demersum HOM05D004747 ORTHO05D006051 8.7e-63 243.8 155 75.5
Migut.H01001 Erythranthe guttata HOM05D004747 ORTHO05D006051 8.7e-63 243.8 156 75.0
Sc16g0000910 Simmondsia chinensis HOM05D004747 ORTHO05D006051 1.1e-62 243.4 155 76.8
Dinv26824 Davidia involucrata HOM05D004747 ORTHO05D006051 2.5e-62 242.3 155 76.1
PGSC0003DMG400014893 Solanum tuberosum HOM05D004747 ORTHO05D006051 2.5e-62 242.3 151 76.8
Cc07_g09390 Coffea canephora HOM05D004747 ORTHO05D006051 3.3e-62 241.9 155 76.1
Lj4g0010267 Lotus japonicus HOM05D004747 ORTHO05D006051 3.3e-62 241.9 155 77.4
arahy.Tifrunner.gnm1.ann1.0AQ0IW Arachis hypogaea HOM05D004747 ORTHO05D006051 4.3e-62 241.5 156 76.9
CDE04G0203 Ceratophyllum demersum HOM05D004747 ORTHO05D006051 4.3e-62 241.5 155 75.5
Oeu007440.1 Olea europaea HOM05D004747 ORTHO05D006051 4.3e-62 241.5 156 74.4
VMungo1215G2053 Vigna mungo HOM05D004747 ORTHO05D006051 4.3e-62 241.5 155 75.5
HanXRQChr07g0192831 Helianthus annuus HOM05D004747 ORTHO05D006051 5.6e-62 241.1 155 74.8
CAN.G358.106 Capsicum annuum HOM05D004747 ORTHO05D006051 7.3e-62 240.7 151 75.5
Glyma.01G175100 Glycine max HOM05D004747 ORTHO05D006051 7.3e-62 240.7 155 74.8
Lj4A199T81 Lonicera japonica HOM05D004747 ORTHO05D006051 7.3e-62 240.7 156 74.4
QL06p045737 Quercus lobata HOM05D004747 ORTHO05D006051 7.3e-62 240.7 156 75.0
Sopen02g030100 Solanum pennellii HOM05D004747 ORTHO05D006051 7.3e-62 240.7 151 76.8
Glyma.11G067300 Glycine max HOM05D004747 ORTHO05D006051 9.6e-62 240.4 155 74.8
Manes.01G134400 Manihot esculenta HOM05D004747 ORTHO05D006051 9.6e-62 240.4 145 77.9
Nitab4.5_0000434g0070 Nicotiana tabacum HOM05D004747 ORTHO05D006051 9.6e-62 240.4 151 75.5
Peaxi162Scf00515g00430 Petunia axillaris HOM05D004747 ORTHO05D006051 9.6e-62 240.4 146 76.0
Psat4g092040 Pisum sativum HOM05D004747 ORTHO05D006051 9.6e-62 240.4 155 76.8
PGR102G2748 Punica granatum HOM05D004747 ORTHO05D006051 1.3e-61 240.0 155 74.2
Cfa004298 Carpinus fangiana HOM05D000682 ORTHO05D000510 1.6e-61 239.6 155 74.8
Nitab4.5_0004711g0020 Nicotiana tabacum HOM05D004747 ORTHO05D006051 1.6e-61 239.6 151 75.5
TPR.G34973 Trifolium pratense HOM05D004747 ORTHO05D006051 1.6e-61 239.6 155 76.1
CiPaw.02G016400 Carya illinoinensis HOM05D004747 ORTHO05D006051 2.1e-61 239.2 155 76.1
Ca_22260_v3 Cicer arietinum L. HOM05D004747 ORTHO05D006051 2.1e-61 239.2 155 76.1
Medtr8g077840 Medicago truncatula HOM05D004747 ORTHO05D006051 2.1e-61 239.2 155 76.1
CSS0024014 Camellia sinensis var. sinensis HOM05D004747 ORTHO05D006051 6.2e-61 237.7 155 75.5
Nn1g05031 Nelumbo nucifera HOM05D004747 ORTHO05D006051 6.2e-61 237.7 155 74.8
vmacro17845 Vaccinium macrocarpon HOM05D004747 ORTHO05D006051 6.2e-61 237.7 156 72.4
FvH4_1g13450 Fragaria vesca HOM05D004747 ORTHO05D006051 8.1e-61 237.3 155 73.5
FAN19G0426 Fragaria x ananassa HOM05D004747 ORTHO05D006051 8.1e-61 237.3 155 73.5
FAN23G0552 Fragaria x ananassa HOM05D004747 ORTHO05D006051 8.1e-61 237.3 156 73.7
FAN23G0698 Fragaria x ananassa HOM05D004747 ORTHO05D006051 8.1e-61 237.3 156 73.7
FAN28G1132 Fragaria x ananassa HOM05D004747 ORTHO05D006051 1.1e-60 236.9 155 73.5
Hund14148 Selenicereus undatus HOM05D004747 ORTHO05D006051 1.1e-60 236.9 156 73.7
Actinidia19177 Actinidia chinensis HOM05D004747 ORTHO05D006051 1.4e-60 236.5 151 76.8
arahy.Tifrunner.gnm1.ann1.Q9RGLK Arachis hypogaea HOM05D004747 ORTHO05D006051 1.4e-60 236.5 156 75.0
Cpa.g.sc337.7 Carica papaya HOM05D004747 ORTHO05D006051 1.4e-60 236.5 155 73.5
RcHm_v2.0_Chr2g0101831 Rosa chinensis HOM05D004747 ORTHO05D006051 1.4e-60 236.5 155 73.5
Solyc02g085420.4 Solanum lycopersicum HOM05D004747 ORTHO05D006051 1.4e-60 236.5 151 76.8
TWI09G1640 Tripterygium wilfordii HOM05D004747 ORTHO05D006051 1.4e-60 236.5 151 76.2
FAN26G3322 Fragaria x ananassa HOM05D004747 ORTHO05D006051 1.8e-60 236.1 156 73.7
Sp2g29940 Schrenkiella parvula HOM05D004747 ORTHO05D006051 2.4e-60 235.7 155 74.2
CANSAT01G3054 Cannabis sativa HOM05D004747 ORTHO05D006051 3.1e-60 235.3 155 74.8
Carub.0005s1700 Capsella rubella HOM05D004747 ORTHO05D006051 3.1e-60 235.3 155 73.5
HanXRQChr14g0441201 Helianthus annuus HOM05D004747 ORTHO05D006051 4.0e-60 235.0 155 72.9
MD02G1149800 Malus domestica HOM05D004747 ORTHO05D006051 4.0e-60 235.0 156 71.8
Duzib187G1223 Durio zibethinus HOM05D004747 ORTHO05D006051 6.9e-60 234.2 155 72.3
Thhalv10004249m.g Eutrema salsugineum HOM05D004747 ORTHO05D006051 9.0e-60 233.8 155 72.9
Lalb_Chr09g0333571 Lupinus albus HOM05D004747 ORTHO05D006051 1.2e-59 233.4 155 73.5
Prupe.7G153200 Prunus persica HOM05D004747 ORTHO05D006051 1.2e-59 233.4 155 72.9
BcaC04g23156 Brassica carinata HOM05D004747 ORTHO05D006051 1.5e-59 233.0 151 74.2
C09p11600 Brassica napus HOM05D000104 ORTHO05D006241 1.5e-59 233.0 151 74.2
BolC9t54053H Brassica oleracea HOM05D004747 ORTHO05D006051 1.5e-59 233.0 151 74.2
ECA238G3955 Erigeron canadensis HOM05D004747 ORTHO05D006051 2.0e-59 232.6 145 75.9
Lalb_Chr05g0212861 Lupinus albus HOM05D004747 ORTHO05D006051 2.0e-59 232.6 155 72.3
MD15G1264400 Malus domestica HOM05D004747 ORTHO05D006051 2.6e-59 232.3 156 71.8
AL5G30830 Arabidopsis lyrata HOM05D004747 ORTHO05D006051 3.4e-59 231.9 155 72.9
AT3G50670 Arabidopsis thaliana HOM05D004747 ORTHO05D006051 3.4e-59 231.9 155 72.9
MELO3C007821.2 Cucumis melo HOM05D004747 ORTHO05D006051 3.4e-59 231.9 155 73.5
CsaV3_6G046180 Cucumis sativus L. HOM05D004747 ORTHO05D006051 3.4e-59 231.9 155 73.5
EL10Ac6g14938 Beta vulgaris HOM05D004747 ORTHO05D006051 5.8e-59 231.1 155 72.9
Sc07g0000250 Simmondsia chinensis HOM05D004747 ORTHO05D006051 5.8e-59 231.1 134 79.1
A09p09800 Brassica napus HOM05D000104 ORTHO05D006241 7.6e-59 230.7 151 74.2
BraA09t36627Z Brassica rapa HOM05D000104 ORTHO05D006241 7.6e-59 230.7 151 74.2
PSO541G4083 Papaver somniferum HOM05D004747 ORTHO05D006051 7.6e-59 230.7 145 75.9
PSO675G8944 Papaver somniferum HOM05D004747 ORTHO05D006051 7.6e-59 230.7 145 75.9
Sed0017755 Sechium edule HOM05D004747 ORTHO05D006051 9.9e-59 230.3 155 72.9
Aa31LG1G15300 Aethionema arabicum HOM05D004747 ORTHO05D006051 1.3e-58 229.9 155 72.3
Aqoxy5G01657 Aquilegia oxysepala HOM05D004747 ORTHO05D006051 1.7e-58 229.6 155 73.5
BcaB04g20104 Brassica carinata HOM05D000104 ORTHO05D006241 2.9e-58 228.8 151 72.8
ClCG01G019460 Citrullus lanatus HOM05D004747 ORTHO05D006051 2.9e-58 228.8 154 72.7
Potri.005G124300 Populus trichocarpa HOM05D004747 ORTHO05D006051 2.9e-58 228.8 145 75.9
Thhalv10010375m.g Eutrema salsugineum HOM05D004747 ORTHO05D006051 3.8e-58 228.4 155 72.3
Haze_15104 Corylus avellana HOM05D004747 ORTHO05D006051 4.9e-58 228.0 182 64.3
Sp5g11550 Schrenkiella parvula HOM05D004747 ORTHO05D006051 4.9e-58 228.0 156 70.5
TWI53G0963 Tripterygium wilfordii HOM05D004747 ORTHO05D006051 4.9e-58 228.0 146 74.0
DCAR_025922 Daucus carota HOM05D004747 ORTHO05D006051 6.4e-58 227.6 158 69.6
BcaB02g09994 Brassica carinata HOM05D000104 ORTHO05D006241 1.1e-57 226.9 155 71.6
Oeu054757.1 Olea europaea HOM05D004747 ORTHO05D006051 1.9e-57 226.1 146 75.3
PSO731G0026 Papaver somniferum HOM05D004747 ORTHO05D006051 1.9e-57 226.1 155 71.6
SGA_v2.0_scaffold276G46638 Striga asiatica HOM05D004747 ORTHO05D006051 1.9e-57 226.1 138 74.6
PSO764G0172 Papaver somniferum HOM05D004747 ORTHO05D006051 2.4e-57 225.7 155 71.0
Sed0005805 Sechium edule HOM05D004747 ORTHO05D006051 4.2e-57 224.9 155 70.3
AUR62003163 Chenopodium quinoa HOM05D004747 ORTHO05D006051 1.6e-56 223.0 176 64.8
Lalb_Chr05g0227631 Lupinus albus HOM05D004747 ORTHO05D006051 1.6e-56 223.0 155 71.0
CARHR280960 Cardamine hirsuta HOM05D004747 ORTHO05D006051 3.5e-56 221.9 155 69.7
A07p17190 Brassica napus HOM05D004747 ORTHO05D006051 1.0e-55 220.3 155 69.0
Zm00001eb224440 Zea mays HOM05D004747 ORTHO05D006051 3.9e-55 218.4 151 68.2
TWI73G1158 Tripterygium wilfordii HOM05D004747 ORTHO05D006051 5.1e-55 218.0 151 70.2
Os10g0115600 Oryza sativa ssp. japonica HOM05D004747 ORTHO05D006051 5.6e-54 214.5 154 65.6
Sabra05G0102100 Salix brachista HOM05D004747 ORTHO05D006051 2.1e-53 212.6 145 71.0
COL.COLO4_22095 Corchorus olitorius HOM05D004747 ORTHO05D006051 2.8e-53 212.2 133 75.9
DCAR_017262 Daucus carota HOM05D004747 ORTHO05D006051 1.4e-52 209.9 145 66.2
Rhsim08G0114500 Rhododendron simsii HOM05D004747 ORTHO05D006051 1.4e-52 209.9 233 51.1
vmacro12724 Vaccinium macrocarpon HOM05D004747 ORTHO05D006051 1.4e-52 209.9 135 72.6
Ah.02g126430 Amaranthus hybridus HOM05D004747 ORTHO05D006051 6.9e-52 207.6 155 67.1
AUR62007983 Chenopodium quinoa HOM05D004747 ORTHO05D006051 8.4e-50 200.7 133 73.7
BolC7t43037H Brassica oleracea HOM05D002587 ORTHO05D002778 4.9e-42 174.9 113 69.9
BcaC06g34739 Brassica carinata HOM05D004747 ORTHO05D006051 1.9e-41 172.9 113 69.0
SGA_v2.0_scaffold33G13369 Striga asiatica HOM05D004747 ORTHO05D006051 1.3e-39 166.8 144 61.1
SMO141G0295 Selaginella moellendorffii HOM05D004747 ORTHO05D006051 8.7e-39 164.1 134 57.5
CSS0048961 Camellia sinensis var. sinensis HOM05D004747 ORTHO05D006051 2.4e-36 156.0 95 74.7
C07p25050 Brassica napus HOM05D004747 ORTHO05D006051 2.5e-33 146.0 196 44.9
arahy.Tifrunner.gnm1.ann1.SH2RA2 Arachis hypogaea HOM05D004747 ORTHO05D006051 9.1e-28 127.5 86 75.6
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 9.1e-28 127.5 133 49.6
Lsat_1_v5_gn_6_52801 Lactuca sativa HOM05D004747 ORTHO05D006051 9.4e-25 117.5 77 67.5
arahy.Tifrunner.gnm1.ann1.SYJW5F Arachis hypogaea HOM05D004747 ORTHO05D006051 7.9e-24 114.4 86 68.6
Lsat_1_v5_gn_2_39760 Lactuca sativa HOM05D004747 ORTHO05D006051 3.0e-23 112.5 77 64.9
Cre16.g656250 Chlamydomonas reinhardtii HOM05D004747 ORTHO05D006051 1.5e-22 110.2 166 38.6
MCO05G091 Micromonas commoda HOM05D004747 ORTHO05D006051 2.4e-20 102.8 135 40.7
PRCOL_00001882 Prasinoderma coloniale HOM05D004747 ORTHO05D006051 5.5e-17 91.7 169 33.7
FAN19G0613 Fragaria x ananassa HOM05D004747 ORTHO05D035492 2.6e-14 82.8 45 80.0
FvH4_7g02770 Fragaria vesca HOM05D004747 ORTHO05D035492 1.3e-13 80.5 45 77.8
FAN11G3309 Fragaria x ananassa HOM05D004747 ORTHO05D035492 1.3e-13 80.5 45 77.8
FAN18G0465 Fragaria x ananassa HOM05D004747 ORTHO05D006051 1.3e-13 80.5 45 77.8
FAN11G0640 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.1e-12 77.4 45 73.3
Cfa025930 Carpinus fangiana HOM05D004747 ORTHO05D006051 1.4e-12 77.0 130 36.2
AL3G39430 Arabidopsis lyrata HOM05D004747 ORTHO05D006051 2.0e-11 73.2 51 72.5
TWI39G0421 Tripterygium wilfordii HOM05D004747 ORTHO05D006051 3.6e-08 62.4 49 63.3


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