Gene: Aa31LG1G15300

General Information

Structural Information

Species Aethionema arabicum
Gene Identifier Aa31LG1G15300
Transcript Identifier Aa31LG1G15300.mRNA1
Gene Type Coding gene
Location LG-1 : 9744875-9748200 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D004747
#Genes/#Species 155/92
Phylogenetic origin

ID ORTHO05D006051
#Genes/#Species 148/92
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

tid Aa31LG1G15300.mRNA1
Alias Aa31LG1G15300
Alias Aa31LG1G15300-mRNA-1

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000398	ISO	PLAZA Integrative Orthology	mRNA splicing, via spliceosome	AT3G50670

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0030619	IEA	InterPro	U1 snRNA binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT3G50670

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT3G50670

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR035979	RNA-binding domain superfamily
IPR034143	snRNP70, RNA recognition motif
IPR000504	RNA recognition motif domain
IPR022023	U1 small nuclear ribonucleoprotein of 70kDa N-terminal
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily

Mapman id	Description
16.2.1.1.1	RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).protein factor (U1-70K)