Gene: AUR62003163

General Information

Structural Information

Species Chenopodium quinoa
Gene Identifier AUR62003163
Transcript Identifier AUR62003163-RA
Gene Type Coding gene
Location C_Quinoa_Scaffold_1000 : 20681223-20689241 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D004747
#Genes/#Species 155/92
Phylogenetic origin

ID ORTHO05D006051
#Genes/#Species 148/92
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id AUR62003163.v1.0
pacid 36301705
uniprot A0A803KVV5

Descriptions

Short descriptions
Ortholog descriptions

Description RNU1: U1 small nuclear ribonucleoprotein 70 kDa

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000398	ISO	PLAZA Integrative Orthology	mRNA splicing, via spliceosome	AT3G50670

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	GOA Database	nucleic acid binding
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0030619	IEA	GOA Database	U1 snRNA binding
GO:0030619	IEA	InterPro	U1 snRNA binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT3G50670

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT3G50670

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR035979	RNA-binding domain superfamily
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
IPR034143	snRNP70, RNA recognition motif
IPR000504	RNA recognition motif domain
IPR022023	U1 small nuclear ribonucleoprotein of 70kDa N-terminal

Mapman id	Description
16.2.1.1.1	RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).protein factor (U1-70K)