Gene: Duzib187G1223

General Information

Structural Information

Species Durio zibethinus
Gene Identifier Duzib187G1223
Transcript Identifier Duzib187G1223.01
Gene Type Coding gene
Location NW_019167860.1 : 21682600-21687161 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D004747
#Genes/#Species 155/92
Phylogenetic origin

ID ORTHO05D006051
#Genes/#Species 148/92
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

name LOC111300042
name XM_022895644.1
pid XP_022751379.1
id gene-LOC111300042
uniprot A0A6P5ZF20

Descriptions

Short descriptions
Ortholog descriptions

product U1 small nuclear ribonucleoprotein 70 kDa-like

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000398	ISO	PLAZA Integrative Orthology	mRNA splicing, via spliceosome	AT3G50670

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	GOA Database	nucleic acid binding
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0030619	IEA	GOA Database	U1 snRNA binding
GO:0030619	IEA	InterPro	U1 snRNA binding
GO:0003723	IEA	GOA Database	RNA binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT3G50670

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	IEA	GOA Database	nucleus

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
IPR022023	U1 small nuclear ribonucleoprotein of 70kDa N-terminal
IPR000504	RNA recognition motif domain
IPR034143	snRNP70, RNA recognition motif
IPR035979	RNA-binding domain superfamily

Mapman id	Description
16.2.1.1.1	RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).protein factor (U1-70K)