Gene: SGA_v2.0_scaffold33G13369
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold33G13369
- Transcript Identifier SGA_v2.0_scaffold33T13369
- Gene Type Coding gene
- Location scaffold33 : 118365-126060 : positive
Gene Family Information
- ID HOM05D004747
- #Genes/#Species 155/92
- Phylogenetic origin
- ID ORTHO05D006051
- #Genes/#Species 148/92
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
Descriptions
- product U1 small nuclear ribonucleoprotein 70 kDa, putative
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000398 | ISO | PLAZA Integrative Orthology | mRNA splicing, via spliceosome | AT3G50670 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | ISO | PLAZA Homology (enrichment) | nucleic acid binding | HOM05D004747 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G50670 |
| GO:0030619 | ISO | PLAZA Homology (enrichment) | U1 snRNA binding | HOM05D004747 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G50670 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR022023 | U1 small nuclear ribonucleoprotein of 70kDa N-terminal |
| Mapman id | Description |
|---|---|
| 16.2.1.1.1 | RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).protein factor (U1-70K) |