Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold51G18714 Striga asiatica HOM05D006329 ORTHO05D008357 1.5e-212 742.7 384 100.0
SalBow6G7241 Salvia bowleyana HOM05D006329 ORTHO05D008357 6.9e-154 547.7 386 76.4
Migut.F01702 Erythranthe guttata HOM05D006329 ORTHO05D008357 6.5e-152 541.2 392 73.5
MSTRG.389 Avicennia marina HOM05D006329 ORTHO05D008357 2.1e-150 536.2 387 73.4
Nitab4.5_0001450g0040 Nicotiana tabacum HOM05D006329 ORTHO05D008357 2.3e-141 506.1 386 69.7
Nitab4.5_0001659g0150 Nicotiana tabacum HOM05D006329 ORTHO05D008357 5.1e-141 505.0 386 69.2
PGSC0003DMG400007434 Solanum tuberosum HOM05D006329 ORTHO05D008357 3.1e-138 495.7 391 68.8
Solyc11g008360.3 Solanum lycopersicum HOM05D006329 ORTHO05D008357 1.2e-137 493.8 398 67.8
Oeu013841.1 Olea europaea HOM05D006329 ORTHO05D008357 1.5e-137 493.4 393 70.2
Cc02_g10940 Coffea canephora HOM05D006329 ORTHO05D008357 2.9e-136 489.2 392 68.1
Actinidia34805 Actinidia chinensis HOM05D006329 ORTHO05D008357 1.6e-134 483.4 387 67.2
Peaxi162Scf00145g01311 Petunia axillaris HOM05D006329 ORTHO05D008357 1.5e-132 476.9 366 69.1
Hma1.2p1_2894F.1_g329960 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 5.0e-128 461.8 386 65.5
Sabra08G0023700 Salix brachista HOM05D006329 ORTHO05D008357 2.7e-126 456.1 359 66.6
Potri.008G035500 Populus trichocarpa HOM05D006329 ORTHO05D008357 8.0e-126 454.5 350 66.9
Gohir.A10G203300 Gossypium hirsutum HOM05D006329 ORTHO05D008357 2.3e-125 453.0 393 62.1
Gohir.D10G211400 Gossypium hirsutum HOM05D006329 ORTHO05D008357 1.1e-124 450.7 393 61.6
Gorai.011G237100 Gossypium raimondii HOM05D006329 ORTHO05D008357 1.1e-124 450.7 393 61.6
RcHm_v2.0_Chr1g0362601 Rosa chinensis HOM05D006329 ORTHO05D008357 1.1e-124 450.7 383 63.4
FAN10G3782 Fragaria x ananassa HOM05D006329 ORTHO05D008357 5.7e-124 448.4 383 63.7
Nn6g35280 Nelumbo nucifera HOM05D006329 ORTHO05D008357 9.7e-124 447.6 383 63.7
MD07G1170000 Malus domestica HOM05D006329 ORTHO05D008357 2.2e-123 446.4 384 64.1
Ciclev10031516m.g Citrus clementina HOM05D006329 ORTHO05D008357 3.7e-123 445.7 369 65.3
Thecc.10G083200 Theobroma cacao HOM05D006329 ORTHO05D008357 4.8e-123 445.3 358 65.9
MBI18_g02633_MAGBIO Magnolia biondii HOM05D006329 ORTHO05D008357 2.7e-121 439.5 389 60.7
Sopen11g004170 Solanum pennellii HOM05D006329 ORTHO05D008357 3.5e-121 439.1 281 77.6
Rhsim09G0148200 Rhododendron simsii HOM05D000461 ORTHO05D001829 4.5e-121 438.7 406 62.3
COL.COLO4_17136 Corchorus olitorius HOM05D006329 ORTHO05D008357 7.7e-121 438.0 394 61.9
FAN10G0068 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.0e-120 437.6 383 62.4
FvH4_7g18810 Fragaria vesca HOM05D006329 ORTHO05D008357 1.7e-120 436.8 383 62.9
Prupe.2G208900 Prunus persica HOM05D006329 ORTHO05D008357 2.9e-120 436.0 387 63.0
Duzib114G0755 Durio zibethinus HOM05D006329 ORTHO05D008357 5.0e-120 435.3 393 60.6
TAR623G1379 Trochodendron aralioides HOM05D006329 ORTHO05D008357 5.0e-120 435.3 392 60.2
Atru.chr12.838 Acer truncatum HOM05D003507 ORTHO05D008357 8.5e-120 434.5 356 62.9
Manes.05G201000 Manihot esculenta HOM05D006329 ORTHO05D008357 8.5e-120 434.5 397 58.9
Ca_10544_v3 Cicer arietinum L. HOM05D006329 ORTHO05D008357 1.1e-119 434.1 392 60.2
CAN.G321.64 Capsicum annuum HOM05D006329 ORTHO05D008357 1.5e-119 433.7 252 82.9
FAN06G3910 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.5e-119 433.7 383 62.7
Sed0004104 Sechium edule HOM05D006329 ORTHO05D008357 1.5e-119 433.7 355 64.8
Aqoxy1G01144 Aquilegia oxysepala HOM05D006329 ORTHO05D008357 1.6e-118 430.3 395 60.8
ClCG08G007690 Citrullus lanatus HOM05D006329 ORTHO05D008357 2.1e-118 429.9 389 60.7
QL08p054507 Quercus lobata HOM05D006329 ORTHO05D008357 2.7e-118 429.5 389 62.2
BcaB02g09141 Brassica carinata HOM05D006329 ORTHO05D008357 1.8e-117 426.8 392 60.7
Glyma.10G207800 Glycine max HOM05D006329 ORTHO05D008357 2.3e-117 426.4 389 60.7
Psat6g180040 Pisum sativum HOM05D006329 ORTHO05D008357 3.0e-117 426.0 388 59.0
GSVIVG01016221001 Vitis vinifera HOM05D006329 ORTHO05D008357 3.0e-117 426.0 255 78.4
Cpa.g.sc53.128 Carica papaya HOM05D006329 ORTHO05D008357 6.8e-117 424.9 333 66.7
QL08p054383 Quercus lobata HOM05D006329 ORTHO05D008357 2.0e-116 423.3 389 61.4
ATR0219G015 Amborella trichopoda HOM05D006329 ORTHO05D008357 4.4e-116 422.2 354 64.4
Thhalv10016747m.g Eutrema salsugineum HOM05D006329 ORTHO05D008357 4.4e-116 422.2 397 57.7
PGR142G3823 Punica granatum HOM05D006329 ORTHO05D008357 4.4e-116 422.2 388 60.6
THA.LOC104824234 Tarenaya hassleriana HOM05D006329 ORTHO05D008357 4.4e-116 422.2 396 59.6
arahy.Tifrunner.gnm1.ann1.KFTR8M Arachis hypogaea HOM05D006329 ORTHO05D008357 7.5e-116 421.4 398 59.8
CsaV3_6G036680 Cucumis sativus L. HOM05D006329 ORTHO05D008357 9.8e-116 421.0 312 68.3
Lsat_1_v5_gn_2_113040 Lactuca sativa HOM05D006329 ORTHO05D008357 1.3e-115 420.6 382 62.0
Medtr1g094190 Medicago truncatula HOM05D006329 ORTHO05D008357 2.2e-115 419.9 387 60.2
Eucgr.G02867 Eucalyptus grandis HOM05D006329 ORTHO05D008357 3.7e-115 419.1 310 67.1
MELO3C019822.2 Cucumis melo HOM05D006329 ORTHO05D008357 4.8e-115 418.7 388 59.5
FAN03G2323 Fragaria x ananassa HOM05D003507 ORTHO05D004324 6.3e-115 418.3 287 73.2
EL10Ac6g14260 Beta vulgaris HOM05D006329 ORTHO05D008357 1.1e-114 417.5 358 62.6
TPR.G10288 Trifolium pratense HOM05D006329 ORTHO05D008357 1.1e-114 417.5 388 59.5
Sp4g21490 Schrenkiella parvula HOM05D006329 ORTHO05D008357 1.8e-114 416.8 400 57.0
Phvul.007G098900 Phaseolus vulgaris HOM05D006329 ORTHO05D008357 5.4e-114 415.2 371 60.6
HanXRQChr14g0456591 Helianthus annuus HOM05D006329 ORTHO05D008357 9.1e-114 414.5 386 61.1
Carub.0004s2119 Capsella rubella HOM05D006329 ORTHO05D008357 2.7e-113 412.9 396 56.6
AT2G39140 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 5.9e-113 411.8 404 55.7
AL4G36440 Arabidopsis lyrata HOM05D006329 ORTHO05D008357 7.7e-113 411.4 407 55.8
CANSAT56G2601 Cannabis sativa HOM05D006329 ORTHO05D008357 7.7e-113 411.4 319 67.1
Haze_16856 Corylus avellana HOM05D006329 ORTHO05D008357 1.7e-112 410.2 324 64.5
FAN06G0494 Fragaria x ananassa HOM05D006329 ORTHO05D008357 2.2e-112 409.8 388 60.1
CiPaw.01G268700 Carya illinoinensis HOM05D006329 ORTHO05D008357 3.8e-112 409.1 309 67.3
Cfa001679 Carpinus fangiana HOM05D006329 ORTHO05D008357 6.5e-112 408.3 273 72.5
Lj5g0015116 Lotus japonicus HOM05D006329 ORTHO05D008357 1.1e-111 407.5 319 65.5
PSO339G5012 Papaver somniferum HOM05D006329 ORTHO05D008357 1.9e-111 406.8 389 58.6
CARHR133910 Cardamine hirsuta HOM05D006329 ORTHO05D008357 2.5e-111 406.4 399 56.6
PSO063G6532 Papaver somniferum HOM05D006329 ORTHO05D008357 2.5e-111 406.4 364 60.2
Ah.02g128110 Amaranthus hybridus HOM05D006329 ORTHO05D008357 1.2e-110 404.1 288 70.5
CDE03G0204 Ceratophyllum demersum HOM05D006329 ORTHO05D008357 1.2e-110 404.1 354 61.0
Zm00001eb004240 Zea mays HOM05D006329 ORTHO05D008357 1.4e-109 400.6 408 57.1
DCAR_005490 Daucus carota HOM05D006329 ORTHO05D008357 1.2e-108 397.5 376 60.1
arahy.Tifrunner.gnm1.ann1.21BGD2 Arachis hypogaea HOM05D006329 ORTHO05D008357 3.4e-108 396.0 388 58.2
BraA05t19681Z Brassica rapa HOM05D006329 ORTHO05D008357 5.7e-108 395.2 392 56.6
CSS0005771 Camellia sinensis var. sinensis HOM05D006329 ORTHO05D008357 1.7e-107 393.7 386 58.5
RhsimUnG0185600 Rhododendron simsii HOM05D000461 ORTHO05D001829 2.2e-107 393.3 389 59.9
vmacro04842 Vaccinium macrocarpon HOM05D006329 ORTHO05D008357 2.8e-107 392.9 412 56.8
A05p07160 Brassica napus HOM05D006329 ORTHO05D008357 4.9e-107 392.1 392 56.6
EL10Ac4g09587 Beta vulgaris HOM05D006329 ORTHO05D008357 2.4e-106 389.8 272 70.6
Lalb_Chr21g0313671 Lupinus albus HOM05D006329 ORTHO05D008357 1.6e-105 387.1 324 61.1
BolC4t22452H Brassica oleracea HOM05D006329 ORTHO05D008357 2.7e-105 386.3 311 63.7
BcaC02g12042 Brassica carinata HOM05D006329 ORTHO05D008357 3.5e-105 386.0 312 63.5
C04p08570 Brassica napus HOM05D006329 ORTHO05D008357 3.5e-105 386.0 312 63.5
ECA238G1295 Erigeron canadensis HOM05D006329 ORTHO05D001676 7.7e-105 384.8 230 80.0
AUR62002759 Chenopodium quinoa HOM05D006329 ORTHO05D008357 1.1e-103 380.9 234 78.6
HPP92_026018 Vanilla planifolia HOM05D006329 ORTHO05D008357 1.8e-101 373.6 348 61.5
HPP92_027741 Vanilla planifolia HOM05D006329 ORTHO05D008357 1.8e-101 373.6 291 68.7
Dinv31231 Davidia involucrata HOM05D006329 ORTHO05D008357 2.3e-101 373.2 326 63.2
Lj3A938T44 Lonicera japonica HOM05D006329 ORTHO05D008357 3.0e-101 372.9 389 58.6
Hund20700 Selenicereus undatus HOM05D006329 ORTHO05D008357 3.5e-97 359.4 461 48.6
VMungo0251G3605 Vigna mungo HOM05D006329 ORTHO05D008357 3.5e-97 359.4 301 62.5
Os03g0152700 Oryza sativa ssp. japonica HOM05D006329 ORTHO05D008357 1.3e-96 357.5 348 58.3
Mapoly0002s0007 Marchantia polymorpha HOM05D006329 ORTHO05D008357 4.4e-92 342.4 255 65.5
Lalb_Chr21g0313541 Lupinus albus HOM05D006329 ORTHO05D008357 4.6e-89 332.4 209 73.7
Pp3c7_13640 Physcomitrium patens HOM05D006329 ORTHO05D008357 2.2e-83 313.5 274 59.1
SMO329G0071 Selaginella moellendorffii HOM05D006329 ORTHO05D008357 3.7e-83 312.8 252 61.1
Sc09g0006060 Simmondsia chinensis HOM05D006329 ORTHO05D008357 6.2e-78 295.4 199 75.9
Cfa001678 Carpinus fangiana HOM05D006329 ORTHO05D008357 2.4e-74 283.5 224 65.2
Aa31LG5G20460 Aethionema arabicum HOM05D006329 ORTHO05D008357 4.1e-74 282.7 372 47.0
FAN01G2166 Fragaria x ananassa HOM05D006329 ORTHO05D008357 4.7e-70 269.2 190 72.1
HPP92_026744 Vanilla planifolia HOM05D006329 ORTHO05D008357 6.2e-62 242.3 259 56.0
CBR_g29624 Chara braunii HOM05D006329 ORTHO05D008357 4.5e-52 209.5 198 57.6
AUR62014125 Chenopodium quinoa HOM05D006329 ORTHO05D008357 3.2e-50 203.4 116 85.3
MCO14G528 Micromonas commoda HOM05D006329 ORTHO05D008357 5.1e-48 196.1 245 45.3
Cre02.g095121 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 3.2e-42 176.8 304 37.8
PRCOL_00004574 Prasinoderma coloniale HOM05D006329 ORTHO05D008357 4.2e-42 176.4 233 43.8
CAN.G176.13 Capsicum annuum HOM05D006329 ORTHO05D033978 6.3e-30 136.0 83 77.1
Hma1.2p1_2894F.1_g329970 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 1.4e-24 118.2 62 87.1
AT3G43340 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 2.3e-24 117.5 75 73.3
Pp3s196_90 Physcomitrium patens HOM05D006329 ORTHO05D008357 6.9e-21 105.9 227 29.1
Cre07.g323550 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 2.3e-16 90.9 229 27.9
Glyma.20G182966 Glycine max HOM05D006329 ORTHO05D028485 2.4e-13 80.9 69 56.5
MCO04G216 Micromonas commoda HOM05D006329 ORTHO05D008357 3.5e-12 77.0 237 27.0
CAN.G184.4 Capsicum annuum HOM05D006329 ORTHO05D028485 1.0e-11 75.5 53 64.2
Hma1.2p1_2894F.1_g329973 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 5.0e-11 73.2 41 80.5
Potri.010G226901 Populus trichocarpa HOM05D006329 ORTHO05D028485 1.9e-10 71.2 51 68.6
MCO01G641 Micromonas commoda HOM05D006329 ORTHO05D008357 1.6e-09 68.2 229 27.9
PRCOL_00006422 Prasinoderma coloniale HOM05D006329 ORTHO05D008357 2.2e-06 57.8 202 28.2


User provided reference genes

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