Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold36G14363 Striga asiatica HOM05D003686 ORTHO05D004322 4.4e-92 341.3 171 100.0
SGA_v2.0_scaffold172G39059 Striga asiatica HOM05D003686 ORTHO05D004322 3.2e-58 228.8 210 62.4
CAN.G1006.23 Capsicum annuum HOM05D003686 ORTHO05D004322 8.1e-46 187.6 159 67.9
Solyc06g008860.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 2.4e-45 186.0 177 62.1
unitig_61.g26148 Utricularia gibba HOM05D003686 ORTHO05D004322 2.4e-45 186.0 142 69.7
Sopen06g003610 Solanum pennellii HOM05D003686 ORTHO05D004322 3.1e-45 185.7 197 56.3
PGSC0003DMG400021997 Solanum tuberosum HOM05D003686 ORTHO05D004322 1.2e-44 183.7 197 55.8
Nitab4.5_0000295g0050 Nicotiana tabacum HOM05D003686 ORTHO05D004322 1.3e-43 180.3 176 61.4
Nitab4.5_0004238g0080 Nicotiana tabacum HOM05D003686 ORTHO05D004322 1.2e-41 173.7 167 61.1
Manes.01G213100 Manihot esculenta HOM05D003686 ORTHO05D004322 1.6e-41 173.3 179 56.4
TAR636G2878 Trochodendron aralioides HOM05D003686 ORTHO05D004322 2.1e-41 172.9 177 57.1
SalBow6G6913 Salvia bowleyana HOM05D003686 ORTHO05D004322 1.7e-40 169.9 196 57.1
Cc01_g20160 Coffea canephora HOM05D003686 ORTHO05D004322 3.0e-40 169.1 180 57.8
SalBow8G5349 Salvia bowleyana HOM05D003686 ORTHO05D004322 6.6e-40 167.9 162 63.6
Gorai.004G053600 Gossypium raimondii HOM05D003686 ORTHO05D004322 1.9e-39 166.4 155 60.0
MSTRG.12592 Avicennia marina HOM05D003686 ORTHO05D004322 2.5e-39 166.0 123 71.5
Gohir.D08G053600 Gossypium hirsutum HOM05D003686 ORTHO05D004322 5.6e-39 164.9 155 60.0
Haze_04804 Corylus avellana HOM05D003686 ORTHO05D004322 2.1e-38 162.9 168 57.7
Rhsim13G0017700 Rhododendron simsii HOM05D003686 ORTHO05D004322 2.1e-38 162.9 215 46.5
Gohir.A08G043900 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.1e-37 160.6 155 58.7
TAR362G1277 Trochodendron aralioides HOM05D003686 ORTHO05D004322 5.3e-37 158.3 158 58.9
Nn1g08910 Nelumbo nucifera HOM05D003686 ORTHO05D004322 6.9e-37 157.9 162 56.2
Glyma.10G021900 Glycine max HOM05D003686 ORTHO05D004322 9.0e-37 157.5 171 57.3
Migut.N02118 Erythranthe guttata HOM05D003686 ORTHO05D004322 2.6e-36 156.0 115 72.2
Migut.O00643 Erythranthe guttata HOM05D003686 ORTHO05D004322 2.6e-36 156.0 115 72.2
Eucgr.A00286 Eucalyptus grandis HOM05D003686 ORTHO05D004322 3.4e-36 155.6 170 54.7
Peaxi162Scf00936g00218 Petunia axillaris HOM05D003686 ORTHO05D004322 4.4e-36 155.2 161 61.5
TAR365G0683 Trochodendron aralioides HOM05D003686 ORTHO05D004322 4.4e-36 155.2 164 56.7
Lalb_Chr02g0143061 Lupinus albus HOM05D003686 ORTHO05D004322 7.6e-36 154.5 202 50.5
CiPaw.07G099200 Carya illinoinensis HOM05D003686 ORTHO05D004322 9.9e-36 154.1 165 56.4
Cpa.g.sc9.157 Carica papaya HOM05D003686 ORTHO05D004322 1.3e-35 153.7 150 60.0
Oeu022800.1 Olea europaea HOM05D003686 ORTHO05D004322 1.3e-35 153.7 87 81.6
Oeu022802.1 Olea europaea HOM05D003686 ORTHO05D004322 1.3e-35 153.7 87 81.6
COL.COLO4_08036 Corchorus olitorius HOM05D003686 ORTHO05D004322 1.7e-35 153.3 158 57.6
Manes.05G068800 Manihot esculenta HOM05D003686 ORTHO05D004322 1.7e-35 153.3 132 63.6
Potri.003G058400 Populus trichocarpa HOM05D003686 ORTHO05D004322 1.7e-35 153.3 189 55.0
PGR031G1643 Punica granatum HOM05D003686 ORTHO05D004322 2.2e-35 152.9 151 61.6
TWI14G0352 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 3.8e-35 152.1 154 57.1
VMungo0720G0802 Vigna mungo HOM05D003686 ORTHO05D004322 4.9e-35 151.8 181 51.9
Actinidia00703 Actinidia chinensis HOM05D003686 ORTHO05D004322 1.1e-34 150.6 206 47.1
Lalb_Chr06g0163281 Lupinus albus HOM05D003686 ORTHO05D004322 1.4e-34 150.2 205 48.3
Gohir.D11G123300 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.9e-34 149.8 159 57.9
TWI23G0547 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 1.9e-34 149.8 118 65.3
Lsat_1_v5_gn_5_188760 Lactuca sativa HOM05D003686 ORTHO05D004322 2.4e-34 149.4 140 61.4
Gorai.007G132200 Gossypium raimondii HOM05D003686 ORTHO05D004322 3.2e-34 149.1 123 65.9
QL04p005272 Quercus lobata HOM05D003686 ORTHO05D004322 3.2e-34 149.1 161 55.9
Aqoxy2G03146 Aquilegia oxysepala HOM05D003686 ORTHO05D004322 4.2e-34 148.7 170 52.9
QL07p015848 Quercus lobata HOM05D003686 ORTHO05D004322 4.2e-34 148.7 205 48.8
Gohir.A11G118400 Gossypium hirsutum HOM05D003686 ORTHO05D004322 5.4e-34 148.3 123 65.9
DCAR_007018 Daucus carota HOM05D003686 ORTHO05D004322 1.6e-33 146.7 173 53.2
GSVIVG01011011001 Vitis vinifera HOM05D003686 ORTHO05D004322 1.6e-33 146.7 128 63.3
vmacro17192 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 2.1e-33 146.4 155 52.9
ECA248G2178 Erigeron canadensis HOM05D003686 ORTHO05D004322 2.7e-33 146.0 140 60.7
ATR0706G002 Amborella trichopoda HOM05D003686 ORTHO05D004322 3.5e-33 145.6 169 51.5
ECA247G2101 Erigeron canadensis HOM05D003686 ORTHO05D004322 3.5e-33 145.6 129 65.1
Glyma.02G152300 Glycine max HOM05D003686 ORTHO05D004322 6.0e-33 144.8 204 49.0
Ciclev10022350m.g Citrus clementina HOM05D003686 ORTHO05D004322 7.8e-33 144.4 128 63.3
THA.LOC104826011 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 7.8e-33 144.4 133 61.7
Sed0010038 Sechium edule HOM05D003686 ORTHO05D004322 1.3e-32 143.7 160 57.5
DCAR_012430 Daucus carota HOM05D003686 ORTHO05D004322 3.0e-32 142.5 168 50.6
HanXRQChr11g0330151 Helianthus annuus HOM05D003686 ORTHO05D004322 5.1e-32 141.7 151 58.3
MD03G1275200 Malus domestica HOM05D003686 ORTHO05D004322 5.1e-32 141.7 154 53.9
Eucgr.B02749 Eucalyptus grandis HOM05D003686 ORTHO05D004322 8.7e-32 141.0 122 63.9
QL93p0358_0011 Quercus lobata HOM05D003686 ORTHO05D004322 1.1e-31 140.6 161 54.7
MSTRG.21821 Avicennia marina HOM05D003686 ORTHO05D004322 1.5e-31 140.2 158 51.9
Ca_09109_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 1.5e-31 140.2 163 54.6
Ca_10377_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 1.5e-31 140.2 171 53.2
Ca_29655_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 1.5e-31 140.2 171 53.2
Cfa010467 Carpinus fangiana HOM05D003686 ORTHO05D004322 2.5e-31 139.4 119 61.3
Phvul.007G166600 Phaseolus vulgaris HOM05D003686 ORTHO05D004322 5.6e-31 138.3 129 61.2
Atru.chr5.1287 Acer truncatum HOM05D003686 ORTHO05D004322 9.6e-31 137.5 211 46.0
Dinv11297 Davidia involucrata HOM05D003686 ORTHO05D004322 9.6e-31 137.5 198 47.5
Dinv11293 Davidia involucrata HOM05D003686 ORTHO05D004322 1.3e-30 137.1 198 47.5
CAN.G185.6 Capsicum annuum HOM05D003686 ORTHO05D004322 3.6e-30 135.6 195 43.6
Prupe.8G251800 Prunus persica HOM05D003686 ORTHO05D004322 4.8e-30 135.2 116 63.8
Mapoly0103s0046 Marchantia polymorpha HOM05D003686 ORTHO05D004322 8.1e-30 134.4 153 51.6
PSO801G0146 Papaver somniferum HOM05D003686 ORTHO05D004322 8.1e-30 134.4 135 59.3
Thhalv10028986m.g Eutrema salsugineum HOM05D003686 ORTHO05D004322 1.1e-29 134.0 119 64.7
CDE11G0890 Ceratophyllum demersum HOM05D003686 ORTHO05D004322 1.4e-29 133.7 144 59.0
AUR62025901 Chenopodium quinoa HOM05D003686 ORTHO05D004322 1.4e-29 133.7 133 61.7
AUR62025902 Chenopodium quinoa HOM05D003686 ORTHO05D004322 1.4e-29 133.7 133 61.7
CANSAT78G2257 Cannabis sativa HOM05D003686 ORTHO05D004322 1.8e-29 133.3 165 51.5
HanXRQChr01g0002781 Helianthus annuus HOM05D003686 ORTHO05D004322 1.8e-29 133.3 140 58.6
Os02g0266100 Oryza sativa ssp. japonica HOM05D003686 ORTHO05D004322 1.8e-29 133.3 144 59.0
RcHm_v2.0_Chr6g0292481 Rosa chinensis HOM05D003686 ORTHO05D004322 1.8e-29 133.3 177 51.4
BraA02t07500Z Brassica rapa HOM05D003686 ORTHO05D004322 2.4e-29 132.9 144 57.6
Medtr7g107640 Medicago truncatula HOM05D003686 ORTHO05D004322 2.4e-29 132.9 121 61.2
Sp6g03160 Schrenkiella parvula HOM05D003686 ORTHO05D004322 2.4e-29 132.9 119 63.9
Migut.N00130 Erythranthe guttata HOM05D003686 ORTHO05D004322 3.1e-29 132.5 161 51.6
CARHR251560 Cardamine hirsuta HOM05D003686 ORTHO05D004322 4.0e-29 132.1 125 62.4
ClCG09G006530 Citrullus lanatus HOM05D003686 ORTHO05D004322 5.3e-29 131.7 142 54.9
Lj1g0025208 Lotus japonicus HOM05D003686 ORTHO05D004322 6.9e-29 131.3 166 52.4
TPR.G15798 Trifolium pratense HOM05D003686 ORTHO05D004322 6.9e-29 131.3 190 46.8
MD11G1297300 Malus domestica HOM05D003686 ORTHO05D004322 9.0e-29 131.0 160 50.6
Solyc01g067830.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 9.0e-29 131.0 172 49.4
Ah.12g061550 Amaranthus hybridus HOM05D003686 ORTHO05D004322 2.0e-28 129.8 138 57.2
AT4G03120 Arabidopsis thaliana HOM05D003686 ORTHO05D004322 2.6e-28 129.4 120 62.5
BcaB05g23688 Brassica carinata HOM05D003686 ORTHO05D004322 3.4e-28 129.0 119 63.0
BcaB05g23689 Brassica carinata HOM05D003686 ORTHO05D004322 3.4e-28 129.0 119 63.0
Hma1.2p1_0643F.1_g194700 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 3.4e-28 129.0 118 60.2
Hma1.2p1_0643F.1_g194711 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 3.4e-28 129.0 118 60.2
Thecc.10G102800 Theobroma cacao HOM05D003686 ORTHO05D004322 7.6e-28 127.9 110 63.6
FAN20G0133 Fragaria x ananassa HOM05D003686 ORTHO05D004322 1.3e-27 127.1 173 50.3
FAN27G0391 Fragaria x ananassa HOM05D003686 ORTHO05D004322 1.3e-27 127.1 173 50.3
Sopen01g029780 Solanum pennellii HOM05D003686 ORTHO05D004322 1.7e-27 126.7 183 45.4
THA.LOC104817532 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 1.7e-27 126.7 151 55.0
CsaV3_7G028310 Cucumis sativus L. HOM05D003686 ORTHO05D004322 2.2e-27 126.3 142 54.2
Medtr1g088990 Medicago truncatula HOM05D003686 ORTHO05D004322 2.2e-27 126.3 127 58.3
A03p30600 Brassica napus HOM05D003686 ORTHO05D004322 2.9e-27 125.9 117 63.2
MELO3C015891.2 Cucumis melo HOM05D003686 ORTHO05D004322 3.8e-27 125.6 120 60.0
FvH4_2g24650 Fragaria vesca HOM05D003686 ORTHO05D004322 4.9e-27 125.2 173 50.3
arahy.Tifrunner.gnm1.ann1.MV1AMG Arachis hypogaea HOM05D003686 ORTHO05D004322 6.4e-27 124.8 203 44.8
AUR62029649 Chenopodium quinoa HOM05D003686 ORTHO05D004322 8.4e-27 124.4 174 48.9
Hma1.2p1_0643F.1_g194695 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 1.1e-26 124.0 154 52.6
Hma1.2p1_0643F.1_g194710 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 1.1e-26 124.0 154 52.6
Lj2P1184T34 Lonicera japonica HOM05D003686 ORTHO05D004322 1.1e-26 124.0 132 56.1
Mapoly0087s0074 Marchantia polymorpha HOM05D003686 ORTHO05D004322 1.1e-26 124.0 157 52.2
Duzib138G0197 Durio zibethinus HOM05D003686 ORTHO05D004322 1.4e-26 123.6 98 66.3
Sabra03G0032800 Salix brachista HOM05D003686 ORTHO05D004322 3.2e-26 122.5 148 54.1
BcaB01g02510 Brassica carinata HOM05D003686 ORTHO05D004322 4.2e-26 122.1 108 63.9
Duzib133G0241 Durio zibethinus HOM05D003686 ORTHO05D004322 4.2e-26 122.1 181 45.3
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 4.2e-26 122.1 120 59.2
FAN15G3346 Fragaria x ananassa HOM05D003686 ORTHO05D004322 5.4e-26 121.7 176 49.4
BraA03t12240Z Brassica rapa HOM05D003686 ORTHO05D004322 7.1e-26 121.3 115 62.6
BcaC01g06704 Brassica carinata HOM05D003686 ORTHO05D004322 9.3e-26 120.9 108 63.0
C03p37160 Brassica napus HOM05D003686 ORTHO05D004322 9.3e-26 120.9 122 59.8
CSS0048633 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 9.3e-26 120.9 170 47.1
BolC3t16013H Brassica oleracea HOM05D003686 ORTHO05D004322 1.6e-25 120.2 115 61.7
PSO339G4974 Papaver somniferum HOM05D003686 ORTHO05D004322 4.6e-25 118.6 129 56.6
Lj5g0005016 Lotus japonicus HOM05D003686 ORTHO05D004322 1.0e-24 117.5 176 47.2
Zm00001eb203990 Zea mays HOM05D003686 ORTHO05D004322 1.3e-24 117.1 135 56.3
Sc25g0004660 Simmondsia chinensis HOM05D003686 ORTHO05D004322 1.8e-24 116.7 187 45.5
BcaB01g01979 Brassica carinata HOM05D003686 ORTHO05D004322 3.0e-24 115.9 164 50.0
Carub.0006s3393 Capsella rubella HOM05D003686 ORTHO05D004322 5.1e-24 115.2 121 59.5
CiPaw.08G100800 Carya illinoinensis HOM05D003686 ORTHO05D004322 8.7e-24 114.4 208 42.3
Psat3g024960 Pisum sativum HOM05D003686 ORTHO05D004322 8.7e-24 114.4 172 45.3
AagrBONN_evm.TU.Sc2ySwM_228.930 Anthoceros agrestis HOM05D003686 ORTHO05D004322 1.5e-23 113.6 59 88.1
Pp3c12_26180 Physcomitrium patens HOM05D003686 ORTHO05D004322 1.5e-23 113.6 126 54.0
EL10Ac2g03326 Beta vulgaris HOM05D003686 ORTHO05D004322 1.9e-23 113.2 153 49.7
BcaC03g16209 Brassica carinata HOM05D003686 ORTHO05D004322 2.5e-23 112.8 117 58.1
BolC2t10013H Brassica oleracea HOM05D003686 ORTHO05D004322 3.3e-23 112.5 166 49.4
A09p02440 Brassica napus HOM05D003686 ORTHO05D004322 4.3e-23 112.1 156 49.4
BraA09t35891Z Brassica rapa HOM05D003686 ORTHO05D004322 4.3e-23 112.1 156 49.4
PGSC0003DMG400022854 Solanum tuberosum HOM05D003686 ORTHO05D004322 4.3e-23 112.1 111 56.8
A02p25120 Brassica napus HOM05D003686 ORTHO05D004322 5.6e-23 111.7 131 54.2
Pp3c4_170 Physcomitrium patens HOM05D003686 ORTHO05D004322 5.6e-23 111.7 126 53.2
arahy.Tifrunner.gnm1.ann1.TAZ1K7 Arachis hypogaea HOM05D003686 ORTHO05D004322 9.6e-23 110.9 161 48.4
BolC9t53184H Brassica oleracea HOM05D003686 ORTHO05D004322 9.6e-23 110.9 162 49.4
Nn2g12370 Nelumbo nucifera HOM05D003686 ORTHO05D004322 9.6e-23 110.9 155 47.7
Peaxi162Scf01364g00015 Petunia axillaris HOM05D003686 ORTHO05D004322 4.8e-22 108.6 120 51.7
Psat3g182400 Pisum sativum HOM05D003686 ORTHO05D004322 8.1e-22 107.8 79 64.6
CSS0007511 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 1.1e-21 107.5 102 58.8
CSS0037271 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 1.1e-21 107.5 102 58.8
Psat0s3642g0040 Pisum sativum HOM05D000068 ORTHO05D025728 5.3e-21 105.1 79 65.8
Sed0008045 Sechium edule HOM05D003686 ORTHO05D004322 5.3e-21 105.1 168 45.8
COL.COLO4_34092 Corchorus olitorius HOM05D003686 ORTHO05D004322 6.9e-21 104.8 123 52.8
Nitab4.5_0001149g0030 Nicotiana tabacum HOM05D003686 ORTHO05D004322 2.0e-20 103.2 197 39.1
HPP92_021468 Vanilla planifolia HOM05D003686 ORTHO05D004322 4.5e-20 102.1 56 83.9
Nitab4.5_0001624g0040 Nicotiana tabacum HOM05D003686 ORTHO05D004322 2.2e-19 99.8 182 41.2
SGA_v2.0_scaffold89G27564 Striga asiatica HOM05D003686 ORTHO05D004322 8.4e-19 97.8 168 40.5
HPP92_021461 Vanilla planifolia HOM05D003686 ORTHO05D004322 8.4e-19 97.8 149 48.3
Hund24902 Selenicereus undatus HOM05D003686 ORTHO05D004322 9.3e-18 94.4 141 46.8
vmacro14959 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 2.3e-16 89.7 171 42.7
FAN24G2968 Fragaria x ananassa HOM05D003686 ORTHO05D004322 3.0e-16 89.4 157 47.1
Psat6g168000 Pisum sativum HOM05D003686 ORTHO05D004322 3.9e-16 89.0 150 44.7
vmacro02511 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 1.5e-15 87.0 81 59.3
FAN20G1534 Fragaria x ananassa HOM05D003686 ORTHO05D004322 1.9e-15 86.7 156 44.9
unitig_22.g6331 Utricularia gibba HOM05D003686 ORTHO05D004322 1.4e-13 80.5 142 38.0
Cre09.g401300 Chlamydomonas reinhardtii HOM05D003686 ORTHO05D004322 3.1e-13 79.3 41 80.5
Lj3A810T51 Lonicera japonica HOM05D003686 ORTHO05D004322 3.4e-12 75.9 152 40.1
C09p02540 Brassica napus HOM05D003686 ORTHO05D004322 4.5e-12 75.5 147 44.2
Peaxi162Scf01067g00002 Petunia axillaris HOM05D003686 ORTHO05D004322 8.4e-11 71.2 97 46.4
vmacro14957 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 1.0e-08 64.3 144 41.7
Lj5g0025755 Lotus japonicus HOM05D003686 ORTHO05D009933 1.5e-07 60.5 61 54.1
PRCOL_00005459 Prasinoderma coloniale HOM05D003686 ORTHO05D004322 1.5e-07 60.5 41 65.9
Duzib211G0369 Durio zibethinus HOM05D003686 ORTHO05D004322 1.9e-07 60.1 79 49.4


User provided reference genes

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