Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold32G13347 Striga asiatica HOM05D005431 ORTHO05D006762 1.6e-239 832.4 450 100.0
SalBow1G3497 Salvia bowleyana HOM05D005431 ORTHO05D006762 5.6e-163 578.2 432 72.0
MSTRG.16956 Avicennia marina HOM05D005431 ORTHO05D006762 7.3e-163 577.8 453 69.8
Dinv18088 Davidia involucrata HOM05D005431 ORTHO05D006762 1.6e-149 533.5 451 64.1
Oeu051845.1 Olea europaea HOM05D005431 ORTHO05D006762 3.5e-149 532.3 463 64.4
Lj1A1139T47 Lonicera japonica HOM05D005431 ORTHO05D006762 5.3e-145 518.5 482 61.4
CSS0010563 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 3.4e-144 515.8 447 64.2
Sc24g0002060 Simmondsia chinensis HOM05D005431 ORTHO05D006762 4.5e-144 515.4 450 64.4
Gohir.A11G240400 Gossypium hirsutum HOM05D005431 ORTHO05D006762 6.4e-143 511.5 444 64.6
Thecc.05G259000 Theobroma cacao HOM05D005431 ORTHO05D006762 2.4e-142 509.6 453 63.8
COL.COLO4_08630 Corchorus olitorius HOM05D005431 ORTHO05D006762 6.0e-141 505.0 452 63.5
Gohir.D11G249800 Gossypium hirsutum HOM05D005431 ORTHO05D006762 1.8e-140 503.4 443 63.2
GSVIVG01020933001 Vitis vinifera HOM05D005431 ORTHO05D006762 1.8e-140 503.4 449 63.0
Gorai.007G267600 Gossypium raimondii HOM05D005431 ORTHO05D006762 3.0e-140 502.7 443 63.2
CSS0005177 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 1.5e-139 500.4 446 63.7
TAR633G0900 Trochodendron aralioides HOM05D005431 ORTHO05D006762 3.7e-138 495.7 453 61.8
Peaxi162Scf00362g01188 Petunia axillaris HOM05D005431 ORTHO05D006762 6.2e-138 495.0 434 63.1
ECA233G5562 Erigeron canadensis HOM05D005431 ORTHO05D006762 1.1e-137 494.2 440 61.6
QL07p020652 Quercus lobata HOM05D005431 ORTHO05D006762 2.0e-136 490.0 452 62.4
arahy.Tifrunner.gnm1.ann1.UBW8VJ Arachis hypogaea HOM05D005431 ORTHO05D006762 5.8e-136 488.4 441 60.8
TWI32G0483 Tripterygium wilfordii HOM05D005431 ORTHO05D006762 2.2e-135 486.5 445 62.0
Glyma.19G109200 Glycine max HOM05D005431 ORTHO05D006762 3.8e-135 485.7 437 63.4
HanXRQChr02g0054501 Helianthus annuus HOM05D005431 ORTHO05D006762 4.9e-135 485.3 447 60.4
Rhsim06G0113900 Rhododendron simsii HOM05D005431 ORTHO05D006762 4.9e-135 485.3 481 57.0
Lalb_Chr14g0364381 Lupinus albus HOM05D005431 ORTHO05D006762 6.4e-135 485.0 442 62.0
Manes.08G148100 Manihot esculenta HOM05D005431 ORTHO05D006762 8.4e-135 484.6 454 61.9
Glyma.16G042800 Glycine max HOM05D005431 ORTHO05D006762 1.9e-134 483.4 438 61.6
Solyc01g110820.4 Solanum lycopersicum HOM05D005431 ORTHO05D006762 1.9e-134 483.4 439 61.7
PSO384G4368 Papaver somniferum HOM05D005431 ORTHO05D006762 4.2e-134 482.3 454 61.2
AUR62035802 Chenopodium quinoa HOM05D005431 ORTHO05D006762 5.5e-134 481.9 449 60.1
Lsat_1_v5_gn_6_37921 Lactuca sativa HOM05D005431 ORTHO05D006762 7.1e-134 481.5 436 58.5
Eucgr.A02076 Eucalyptus grandis HOM05D005431 ORTHO05D006762 2.1e-133 479.9 454 60.4
Atru.chr2.1265 Acer truncatum HOM05D005431 ORTHO05D006762 2.7e-133 479.6 468 60.3
MBI13_g30325_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 2.7e-133 479.6 448 62.3
PGSC0003DMG400001606 Solanum tuberosum HOM05D005431 ORTHO05D006762 3.5e-133 479.2 443 61.2
Ciclev10020067m.g Citrus clementina HOM05D005431 ORTHO05D006762 7.9e-133 478.0 452 60.8
Duzib177G0804 Durio zibethinus HOM05D005431 ORTHO05D006762 7.9e-133 478.0 457 60.6
CiPaw.10G000400 Carya illinoinensis HOM05D005431 ORTHO05D006762 1.3e-132 477.2 450 62.9
Prupe.6G097200 Prunus persica HOM05D005431 ORTHO05D006762 1.8e-132 476.9 443 61.6
Potri.013G054300 Populus trichocarpa HOM05D005431 ORTHO05D006762 3.0e-132 476.1 447 61.1
PSO339G6142 Papaver somniferum HOM05D005431 ORTHO05D006762 1.1e-131 474.2 463 59.0
Cc10_g14020 Coffea canephora HOM05D005431 ORTHO05D006762 4.3e-131 472.2 451 59.9
Medtr7g085290 Medicago truncatula HOM05D005431 ORTHO05D006762 4.3e-131 472.2 440 60.2
PGR042G1130 Punica granatum HOM05D005431 ORTHO05D006762 3.7e-130 469.2 446 60.1
Aqoxy6G02574 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 6.2e-130 468.4 450 59.1
MD03G1112900 Malus domestica HOM05D005431 ORTHO05D006762 6.2e-130 468.4 441 61.2
CANSAT78G0764 Cannabis sativa HOM05D005431 ORTHO05D006762 1.4e-129 467.2 455 59.3
Aqoxy2G02389 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 2.4e-129 466.5 450 59.1
Sabra13G0049000 Salix brachista HOM05D005431 ORTHO05D006762 5.3e-129 465.3 445 60.9
Phvul.001G100700 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 9.0e-129 464.5 438 60.7
Lj1g0019204 Lotus japonicus HOM05D005431 ORTHO05D006762 4.5e-128 462.2 434 59.7
Ca_08254_v3 Cicer arietinum L. HOM05D005431 ORTHO05D006762 5.8e-128 461.8 440 59.5
Sopen01g052890 Solanum pennellii HOM05D005431 ORTHO05D006762 1.3e-127 460.7 440 60.0
FvH4_3g32950 Fragaria vesca HOM05D005431 ORTHO05D006762 2.9e-127 459.5 444 59.7
HPP92_006679 Vanilla planifolia HOM05D005431 ORTHO05D006762 4.6e-125 452.2 434 57.1
FAN16G2474 Fragaria x ananassa HOM05D005431 ORTHO05D006762 7.9e-125 451.4 444 57.4
Nitab4.5_0001364g0090 Nicotiana tabacum HOM05D005431 ORTHO05D006762 6.7e-124 448.4 414 61.4
FAN11G0735 Fragaria x ananassa HOM05D005431 ORTHO05D006762 2.5e-123 446.4 435 59.1
Zm00001eb015560 Zea mays HOM05D005431 ORTHO05D006762 3.3e-123 446.0 442 55.9
BraA06t23807Z Brassica rapa HOM05D005431 ORTHO05D006762 9.7e-123 444.5 451 53.9
Migut.C00530 Erythranthe guttata HOM05D005431 ORTHO05D006762 2.8e-122 443.0 321 73.2
CDE02G0906 Ceratophyllum demersum HOM05D005431 ORTHO05D006762 1.4e-121 440.7 441 58.3
BolC5t29482H Brassica oleracea HOM05D005431 ORTHO05D006762 3.1e-121 439.5 463 52.7
Os03g0326600 Oryza sativa ssp. japonica HOM05D005431 ORTHO05D006762 4.1e-121 439.1 440 58.4
AT1G09230 Arabidopsis thaliana HOM05D005431 ORTHO05D006762 1.5e-120 437.2 456 53.5
Cfa016425 Carpinus fangiana HOM05D005431 ORTHO05D006762 3.4e-120 436.0 436 60.6
Sp1g07840 Schrenkiella parvula HOM05D005431 ORTHO05D006762 3.4e-120 436.0 455 53.6
RcHm_v2.0_Chr5g0060221 Rosa chinensis HOM05D005431 ORTHO05D006762 1.3e-119 434.1 442 57.5
VMungo1383G2520 Vigna mungo HOM05D005431 ORTHO05D006762 1.7e-119 433.7 408 60.5
C05p07240 Brassica napus HOM05D005431 ORTHO05D006762 3.8e-119 432.6 461 52.3
Thhalv10007645m.g Eutrema salsugineum HOM05D005431 ORTHO05D006762 5.5e-118 428.7 447 53.2
THA.LOC104805792 Tarenaya hassleriana HOM05D005431 ORTHO05D006762 4.6e-117 425.6 443 54.6
A06p05970 Brassica napus HOM05D005431 ORTHO05D006762 5.1e-116 422.2 461 51.2
Psat3g089720 Pisum sativum HOM05D005431 ORTHO05D006762 6.7e-116 421.8 439 56.5
ATR0782G102 Amborella trichopoda HOM05D005431 ORTHO05D006762 2.0e-115 420.2 455 55.4
TPR.G5901 Trifolium pratense HOM05D005431 ORTHO05D006762 9.7e-115 417.9 478 52.3
Nn7g35775 Nelumbo nucifera HOM05D005431 ORTHO05D006762 1.3e-114 417.5 456 53.5
Haze_19398 Corylus avellana HOM05D005431 ORTHO05D006762 2.8e-114 416.4 454 56.8
AL1G19720 Arabidopsis lyrata HOM05D005431 ORTHO05D006762 3.4e-112 409.5 457 50.5
BcaC05g24779 Brassica carinata HOM05D005431 ORTHO05D006762 4.5e-112 409.1 469 49.9
Aa31LG1G5950 Aethionema arabicum HOM05D005431 ORTHO05D006762 1.0e-111 407.9 459 50.8
Carub.0001s0857 Capsella rubella HOM05D005431 ORTHO05D006762 2.5e-110 403.3 435 52.0
Duzib128G1128 Durio zibethinus HOM05D005431 ORTHO05D006762 2.1e-109 400.2 450 55.1
Actinidia02566 Actinidia chinensis HOM05D005431 ORTHO05D006762 2.0e-107 393.7 347 64.0
vmacro12472 Vaccinium macrocarpon HOM05D005431 ORTHO05D006762 2.0e-107 393.7 611 44.5
EL10Ac8g19795 Beta vulgaris HOM05D005431 ORTHO05D006762 8.2e-106 388.3 339 63.7
arahy.Tifrunner.gnm1.ann1.H79Q9S Arachis hypogaea HOM05D005431 ORTHO05D006762 1.2e-104 384.4 438 51.6
Cfa011866 Carpinus fangiana HOM05D005431 ORTHO05D006762 1.4e-102 377.5 387 58.4
SEGI_41626 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 5.5e-102 375.6 443 49.4
Sed0005030 Sechium edule HOM05D005431 ORTHO05D006762 3.9e-100 369.4 357 58.0
Haze_21236 Corylus avellana HOM05D005431 ORTHO05D006762 1.5e-99 367.5 380 58.9
AUR62027554 Chenopodium quinoa HOM05D005431 ORTHO05D006762 5.3e-97 359.0 399 50.4
Cpa.g.sc594.2 Carica papaya HOM05D005431 ORTHO05D006762 4.0e-92 342.8 349 59.0
arahy.Tifrunner.gnm1.ann1.M3GFZ7 Arachis hypogaea HOM05D005431 ORTHO05D006762 2.0e-91 340.5 391 54.0
CsaV3_6G010080 Cucumis sativus L. HOM05D005431 ORTHO05D006762 3.5e-88 329.7 316 60.8
SMO339G0047 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 6.3e-82 308.9 392 44.9
Pp3c5_17010 Physcomitrium patens HOM05D005431 ORTHO05D006762 1.2e-77 294.7 397 46.1
Potri.019G031700 Populus trichocarpa HOM05D005431 ORTHO05D006762 1.2e-77 294.7 313 57.8
AagrBONN_evm.TU.Sc2ySwM_228.5426 Anthoceros agrestis HOM05D005431 ORTHO05D006762 1.7e-74 284.3 333 47.4
GSVIVG01010770001 Vitis vinifera HOM05D005431 ORTHO05D006762 5.4e-73 279.3 263 62.7
ClCG02G009850 Citrullus lanatus HOM05D005431 ORTHO05D006762 5.0e-71 272.7 275 58.2
CARHR009190 Cardamine hirsuta HOM05D005431 ORTHO05D006762 1.7e-66 257.7 270 51.9
Aqoxy113s003 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 3.1e-60 236.9 415 39.8
Mapoly0054s0019 Marchantia polymorpha HOM05D005431 ORTHO05D006762 6.8e-52 209.1 286 42.7
BcaB03g13279 Brassica carinata HOM05D005431 ORTHO05D006762 7.1e-49 199.1 198 53.5
Hund08532 Selenicereus undatus HOM05D005431 ORTHO05D006762 2.1e-48 197.6 335 42.1
CBR_g41665 Chara braunii HOM05D005431 ORTHO05D006762 3.5e-48 196.8 591 28.8
Rhsim03G0115400 Rhododendron simsii HOM05D005431 ORTHO05D006762 2.8e-45 187.2 331 39.3
AagrBONN_evm.TU.Sc2ySwM_117.3064__3065 Anthoceros agrestis HOM05D005431 ORTHO05D006762 7.3e-38 162.5 252 42.9
Cpa.g.sc3384.1 Carica papaya HOM05D005431 ORTHO05D006762 9.6e-38 162.2 99 77.8
Phvul.004G137800 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 3.1e-36 157.1 97 76.3
TPR.G5899 Trifolium pratense HOM05D000002 ORTHO05D000001 9.0e-36 155.6 162 61.1
Hund08530 Selenicereus undatus HOM05D005431 ORTHO05D006762 1.2e-35 155.2 96 75.0
GSVIVG01010771001 Vitis vinifera HOM05D005431 ORTHO05D006762 4.4e-35 153.3 147 54.4
MBI05_g45098_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 2.4e-25 120.9 174 55.2
MELO3C013491.2 Cucumis melo HOM05D005431 ORTHO05D006762 1.0e-23 115.5 181 48.1
MBI05_g33993_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 2.8e-21 107.5 100 54.0
Pp3c25_8310 Physcomitrium patens HOM05D005431 ORTHO05D006762 5.8e-19 99.8 112 47.3
AagrBONN_evm.TU.Sc2ySwM_228.2880 Anthoceros agrestis HOM05D005431 ORTHO05D006762 3.2e-17 94.0 146 38.4
TPR.G5921 Trifolium pratense HOM05D005431 ORTHO05D006762 1.2e-16 92.0 54 77.8
SGA_v2.0_scaffold612G53193 Striga asiatica HOM05D005431 ORTHO05D006762 3.9e-15 87.0 50 82.0
Lsat_1_v5_gn_3_133701 Lactuca sativa HOM05D005431 ORTHO05D006762 2.8e-13 80.9 133 42.9
SHI14712 Sapria himalayana HOM05D000001 ORTHO05D009229 1.1e-12 79.0 49 71.4
SMO116G0263 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 1.2e-11 75.5 85 44.7
C08p12570 Brassica napus HOM05D005431 ORTHO05D006762 1.5e-11 75.1 50 72.0
BolC8t48895H Brassica oleracea HOM05D005431 ORTHO05D006762 1.5e-11 75.1 50 72.0
TPR.G552 Trifolium pratense HOM05D005431 ORTHO05D006762 3.4e-11 73.9 110 41.8
Aqoxy6G02072 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.3e-10 72.0 338 25.7
CAN.G134.235 Capsicum annuum HOM05D005431 ORTHO05D006762 2.9e-10 70.9 56 62.5
SHI14714 Sapria himalayana HOM05D005431 ORTHO05D006762 2.9e-10 70.9 49 63.3
SHI14717 Sapria himalayana HOM05D005431 ORTHO05D006762 3.2e-09 67.4 123 36.6
ClCG02G009830 Citrullus lanatus HOM05D005431 ORTHO05D006762 9.3e-09 65.9 41 78.0
SEGI_17961 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 2.7e-08 64.3 83 43.4
SHI14719 Sapria himalayana HOM05D005431 ORTHO05D006762 2.3e-07 61.2 33 84.8
Lsat_1_v5_gn_6_94960 Lactuca sativa HOM05D005431 ORTHO05D003355 3.3e-06 57.4 38 65.8


User provided reference genes

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