Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold19G08599 Striga asiatica HOM05D002849 ORTHO05D007186 5.7e-272 940.3 461 100.0
Migut.N03194 Erythranthe guttata HOM05D002849 ORTHO05D007186 2.6e-171 605.9 444 71.2
Cc10_g00890 Coffea canephora HOM05D002849 ORTHO05D007186 7.5e-163 577.8 443 68.6
CSS0035799 Camellia sinensis var. sinensis HOM05D002849 ORTHO05D007186 1.3e-162 577.0 445 68.3
Potri.005G083500 Populus trichocarpa HOM05D002849 ORTHO05D007186 2.8e-162 575.9 436 68.6
Duzib093G2127 Durio zibethinus HOM05D002849 ORTHO05D007186 1.2e-160 570.5 445 67.6
Prupe.1G356900 Prunus persica HOM05D002849 ORTHO05D007186 3.5e-160 568.9 443 66.8
vmacro21838 Vaccinium macrocarpon HOM05D002849 ORTHO05D007186 3.5e-160 568.9 457 65.9
Dinv39573 Davidia involucrata HOM05D002849 ORTHO05D007186 1.0e-159 567.4 445 67.4
Eucgr.F03540 Eucalyptus grandis HOM05D002849 ORTHO05D007186 1.3e-159 567.0 444 66.7
Atru.chr13.175_Atru.chr13.176 Acer truncatum HOM05D002849 ORTHO05D007186 2.3e-159 566.2 446 66.4
Thecc.08G055100 Theobroma cacao HOM05D002849 ORTHO05D007186 2.3e-159 566.2 445 67.2
FvH4_2g37771 Fragaria vesca HOM05D002849 ORTHO05D007186 3.8e-159 565.5 453 66.0
Nn6g31840 Nelumbo nucifera HOM05D002849 ORTHO05D007186 5.0e-159 565.1 439 68.8
CiPaw.08G071100 Carya illinoinensis HOM05D002849 ORTHO05D007186 6.6e-159 564.7 445 67.0
Nitab4.5_0001131g0060 Nicotiana tabacum HOM05D002849 ORTHO05D007186 1.9e-158 563.1 450 67.3
Ciclev10001644m.g Citrus clementina HOM05D002849 ORTHO05D007186 2.5e-158 562.8 443 66.1
FAN27G2060 Fragaria x ananassa HOM05D002849 ORTHO05D007186 2.5e-158 562.8 453 66.0
Manes.08G142100 Manihot esculenta HOM05D002849 ORTHO05D007186 4.3e-158 562.0 443 65.9
Aqoxy6G01855 Aquilegia oxysepala HOM05D002849 ORTHO05D007186 2.8e-157 559.3 436 67.2
CANSAT11G2551 Cannabis sativa HOM05D002849 ORTHO05D007186 2.8e-157 559.3 450 65.1
GSVIVG01008705001 Vitis vinifera HOM05D002849 ORTHO05D007186 4.7e-157 558.5 459 65.4
FAN20G1564 Fragaria x ananassa HOM05D002849 ORTHO05D007186 1.0e-156 557.4 453 65.1
MD08G1004800 Malus domestica HOM05D002849 ORTHO05D007186 1.0e-156 557.4 436 67.0
Rhsim06G0009600 Rhododendron simsii HOM05D002849 ORTHO05D007186 1.4e-156 557.0 485 62.3
Hund05132 Selenicereus undatus HOM05D002849 ORTHO05D007186 1.8e-156 556.6 438 66.7
TWI56G0831 Tripterygium wilfordii HOM05D002849 ORTHO05D007186 1.8e-156 556.6 444 66.0
QL02p013578 Quercus lobata HOM05D002849 ORTHO05D007186 2.3e-156 556.2 466 63.3
PSO675G6932 Papaver somniferum HOM05D002849 ORTHO05D007186 4.0e-156 555.4 449 65.0
Sed0011348 Sechium edule HOM05D002849 ORTHO05D007186 4.0e-156 555.4 445 66.3
PGR083G0750 Punica granatum HOM05D002849 ORTHO05D007186 6.8e-156 554.7 445 65.6
MELO3C011328.2 Cucumis melo HOM05D002849 ORTHO05D007186 8.9e-156 554.3 445 66.3
TAR376G0763 Trochodendron aralioides HOM05D002849 ORTHO05D007186 8.9e-156 554.3 445 65.8
Gohir.D05G184300 Gossypium hirsutum HOM05D002849 ORTHO05D007186 1.2e-155 553.9 445 65.2
Gorai.009G189800 Gossypium raimondii HOM05D002849 ORTHO05D007186 1.2e-155 553.9 445 65.2
Gohir.A05G181300 Gossypium hirsutum HOM05D002849 ORTHO05D007186 2.6e-155 552.7 445 64.9
Carub.0002s2306 Capsella rubella HOM05D002849 ORTHO05D007186 3.4e-155 552.4 436 66.3
AL2G36230 Arabidopsis lyrata HOM05D002849 ORTHO05D007186 4.4e-155 552.0 436 66.5
AT2G44270 Arabidopsis thaliana HOM05D002849 ORTHO05D007186 4.4e-155 552.0 437 65.9
Oeu046334.1 Olea europaea HOM05D002849 ORTHO05D007186 9.8e-155 550.8 421 68.9
Carub.0004s2686 Capsella rubella HOM05D002849 ORTHO05D007186 2.2e-154 549.7 437 65.4
PSO541G1452 Papaver somniferum HOM05D002849 ORTHO05D007186 2.9e-154 549.3 431 66.8
Hma1.2p1_1100F.1_g257100 Hydrangea macrophylla HOM05D002849 ORTHO05D007186 3.7e-154 548.9 443 65.7
CARHR069720 Cardamine hirsuta HOM05D002849 ORTHO05D007186 6.4e-154 548.1 436 66.1
Sc02g0008960 Simmondsia chinensis HOM05D002849 ORTHO05D007186 8.3e-154 547.7 435 66.4
AL4G43230 Arabidopsis lyrata HOM05D002849 ORTHO05D007186 1.1e-153 547.4 437 65.4
Sp4g26340 Schrenkiella parvula HOM05D002849 ORTHO05D007186 1.4e-153 547.0 436 65.1
A05p04470 Brassica napus HOM05D002849 ORTHO05D007186 9.2e-153 544.3 449 63.7
C04p05180 Brassica napus HOM05D002849 ORTHO05D007186 9.2e-153 544.3 442 65.4
THA.LOC104811452 Tarenaya hassleriana HOM05D002849 ORTHO05D007186 1.2e-152 543.9 431 65.2
unitig_744.g24607 Utricularia gibba HOM05D002849 ORTHO05D007186 1.2e-152 543.9 444 66.4
BraA05t19423Z Brassica rapa HOM05D002849 ORTHO05D007186 5.9e-152 541.6 459 62.3
Thhalv10018770m.g Eutrema salsugineum HOM05D002849 ORTHO05D007186 5.9e-152 541.6 444 64.9
ClCG08G013910 Citrullus lanatus HOM05D002849 ORTHO05D007186 1.3e-151 540.4 448 65.2
Lj4A14T52 Lonicera japonica HOM05D002849 ORTHO05D007186 3.0e-151 539.3 482 61.8
Aa31LG1G25890 Aethionema arabicum HOM05D002849 ORTHO05D007186 3.9e-151 538.9 436 64.9
Medtr3g118250 Medicago truncatula HOM05D002849 ORTHO05D007186 5.0e-151 538.5 434 65.0
BraA07t31703Z Brassica rapa HOM05D002849 ORTHO05D007186 6.6e-151 538.1 467 61.5
Lsat_1_v5_gn_3_7661 Lactuca sativa HOM05D002849 ORTHO05D007186 4.3e-150 535.4 431 66.1
BolC4t22158H Brassica oleracea HOM05D002849 ORTHO05D007186 1.0e-148 530.8 471 61.1
Lj1g0000302 Lotus japonicus HOM05D002849 ORTHO05D007186 2.3e-148 529.6 432 65.0
Cfa017767 Carpinus fangiana HOM05D002849 ORTHO05D007186 8.9e-148 527.7 418 67.5
Glyma.04G002200 Glycine max HOM05D002849 ORTHO05D007186 7.5e-147 524.6 436 63.3
CsaV3_2G024550 Cucumis sativus L. HOM05D000201 ORTHO05D000490 2.9e-146 522.7 445 63.4
MBI08_g35553_MAGBIO Magnolia biondii HOM05D002849 ORTHO05D007186 6.4e-146 521.5 441 63.3
ECA246G5259 Erigeron canadensis HOM05D002849 ORTHO05D007186 8.3e-146 521.2 406 66.5
Ca_15284_v3 Cicer arietinum L. HOM05D002849 ORTHO05D007186 3.2e-145 519.2 433 63.0
Ca_15420_v3 Cicer arietinum L. HOM05D002849 ORTHO05D007186 3.2e-145 519.2 433 63.0
arahy.Tifrunner.gnm1.ann1.ID8SUW Arachis hypogaea HOM05D002849 ORTHO05D007186 2.0e-144 516.5 436 62.8
Phvul.009G117600 Phaseolus vulgaris HOM05D002849 ORTHO05D007186 3.5e-144 515.8 436 61.7
Zm00001eb255730 Zea mays HOM05D002849 ORTHO05D007186 1.3e-143 513.8 444 62.4
C06p50120 Brassica napus HOM05D002849 ORTHO05D007186 1.7e-143 513.5 436 63.1
Os02g0762300 Oryza sativa ssp. japonica HOM05D002849 ORTHO05D007186 2.3e-143 513.1 452 61.7
BcaNung06602 Brassica carinata HOM05D002849 ORTHO05D007186 3.0e-143 512.7 438 61.6
DCAR_016752 Daucus carota HOM05D002022 ORTHO05D002056 3.0e-143 512.7 407 67.3
BcaB02g08806 Brassica carinata HOM05D002849 ORTHO05D007186 3.9e-143 512.3 438 61.4
HPP92_024207 Vanilla planifolia HOM05D002849 ORTHO05D007186 1.5e-142 510.4 436 63.3
Haze_22739 Corylus avellana HOM05D002849 ORTHO05D007186 1.9e-142 510.0 458 61.8
Lalb_Chr23g0264921 Lupinus albus HOM05D002849 ORTHO05D007186 1.4e-140 503.8 436 61.5
A07p41740 Brassica napus HOM05D002849 ORTHO05D007186 1.9e-137 493.4 402 64.2
Cfa014032 Carpinus fangiana HOM05D002849 ORTHO05D007186 5.4e-137 491.9 418 63.6
Os01g0598900 Oryza sativa ssp. japonica HOM05D002849 ORTHO05D007186 3.1e-132 476.1 413 61.5
Mapoly0148s0040 Marchantia polymorpha HOM05D002849 ORTHO05D007186 4.0e-132 475.7 432 57.6
EL10Ac2g04301 Beta vulgaris HOM05D002849 ORTHO05D007186 9.9e-131 471.1 437 59.3
COL.COLO4_21615 Corchorus olitorius HOM05D002849 ORTHO05D007186 2.2e-130 469.9 443 59.1
BcaC08g47111 Brassica carinata HOM05D002849 ORTHO05D007186 3.8e-130 469.2 459 56.9
Sp5g31310 Schrenkiella parvula HOM05D002849 ORTHO05D007186 8.4e-130 468.0 445 59.1
SMO118G0346 Selaginella moellendorffii HOM05D002849 ORTHO05D007186 3.2e-129 466.1 421 57.2
VMungo1309G1771 Vigna mungo HOM05D002849 ORTHO05D007186 1.2e-128 464.2 436 57.1
BolC6t40052H Brassica oleracea HOM05D002849 ORTHO05D007186 2.1e-128 463.4 450 58.0
arahy.Tifrunner.gnm1.ann1.D80FKX Arachis hypogaea HOM05D002849 ORTHO05D007186 3.5e-128 462.6 436 58.0
MD15G1004300 Malus domestica HOM05D002849 ORTHO05D007186 1.3e-127 460.7 461 56.2
Pp3c27_3320 Physcomitrium patens HOM05D002849 ORTHO05D007186 3.0e-127 459.5 399 59.1
BcaC08g47284 Brassica carinata HOM05D002849 ORTHO05D007186 6.6e-127 458.4 448 57.6
CBR_g55299 Chara braunii HOM05D002849 ORTHO05D007186 1.6e-117 427.2 393 55.5
Solyc08g074590.2 Solanum lycopersicum HOM05D002849 ORTHO05D007186 2.8e-117 426.4 223 92.4
Sopen08g023190 Solanum pennellii HOM05D002849 ORTHO05D007186 2.8e-117 426.4 223 92.4
AUR62013834 Chenopodium quinoa HOM05D002849 ORTHO05D007186 9.0e-116 421.4 448 53.1
HanXRQChr17g0533361 Helianthus annuus HOM05D002849 ORTHO05D007186 1.7e-114 417.2 223 90.1
RcHm_v2.0_Chr6g0303961 Rosa chinensis HOM05D002849 ORTHO05D007186 1.7e-114 417.2 232 86.6
SHI05854 Sapria himalayana HOM05D002849 ORTHO05D007186 1.1e-113 414.5 403 55.6
ATR0661G072 Amborella trichopoda HOM05D002849 ORTHO05D007186 7.1e-113 411.8 235 85.1
CARHR139450 Cardamine hirsuta HOM05D002849 ORTHO05D007186 2.7e-112 409.8 214 90.7
Cre16.g666100 Chlamydomonas reinhardtii HOM05D002849 ORTHO05D007186 6.0e-112 408.7 391 54.7
Peaxi162Scf00166g00641 Petunia axillaris HOM05D002849 ORTHO05D007186 4.3e-110 402.5 221 89.1
TPR.G36468 Trifolium pratense HOM05D002849 ORTHO05D007186 1.2e-107 394.4 379 57.5
Nitab4.5_0000907g0040 Nicotiana tabacum HOM05D002849 ORTHO05D007186 4.9e-106 389.0 436 53.9
AUR62036771 Chenopodium quinoa HOM05D002849 ORTHO05D007186 4.6e-104 382.5 408 53.2
AagrBONN_evm.TU.Sc2ySwM_344.4630 Anthoceros agrestis HOM05D002849 ORTHO05D007186 1.3e-103 380.9 342 59.1
TAR628G0269 Trochodendron aralioides HOM05D002849 ORTHO05D007186 5.1e-103 379.0 232 81.0
Haze_27194 Corylus avellana HOM05D002849 ORTHO05D007186 2.1e-101 373.6 411 48.4
AT1G76170 Arabidopsis thaliana HOM05D002849 ORTHO05D007186 5.5e-97 359.0 325 59.7
Cfa027047 Carpinus fangiana HOM05D002849 ORTHO05D007186 5.1e-95 352.4 450 47.1
PRCOL_00001104 Prasinoderma coloniale HOM05D002849 ORTHO05D007186 5.7e-94 349.0 416 46.9
Cpa.g.sc26.233 Carica papaya HOM05D002849 ORTHO05D007186 7.6e-91 338.6 435 48.3
HPP92_024246 Vanilla planifolia HOM05D002849 ORTHO05D007186 3.8e-90 336.3 327 57.8
Ah.01g004180 Amaranthus hybridus HOM05D002849 ORTHO05D007186 2.4e-84 317.0 219 72.6
Peaxi162Scf00445g00105 Petunia axillaris HOM05D002849 ORTHO05D007186 4.4e-54 216.5 145 74.5
VMungo1309G1925 Vigna mungo HOM05D002849 ORTHO05D007186 1.4e-52 211.5 198 57.6
Lj9A176T24 Lonicera japonica HOM05D002849 ORTHO05D007186 5.4e-52 209.5 298 44.0
Psat5g001160 Pisum sativum HOM05D002849 ORTHO05D007186 3.0e-47 193.7 282 44.7
Peaxi162Scf00166g00633 Petunia axillaris HOM05D002849 ORTHO05D007186 8.0e-40 169.1 201 49.8
SalBow6G3808 Salvia bowleyana HOM05D002849 ORTHO05D007186 8.9e-39 165.6 95 85.3
RcHm_v2.0_Chr6g0303951 Rosa chinensis HOM05D002849 ORTHO05D007186 6.4e-37 159.5 92 79.3
Prupe.3G237200 Prunus persica HOM05D002849 ORTHO05D007186 1.6e-35 154.8 83 85.5
HanXRQChr17g0533371 Helianthus annuus HOM05D002849 ORTHO05D007186 1.7e-34 151.4 95 78.9
CARHR139440 Cardamine hirsuta HOM05D002849 ORTHO05D007186 1.9e-33 147.9 96 75.0
SpUn0523_0010 Schrenkiella parvula HOM05D002849 ORTHO05D007186 1.4e-31 141.7 120 64.2
ATR0661G077 Amborella trichopoda HOM05D002849 ORTHO05D007186 1.7e-29 134.8 101 66.3
FAN08G3136 Fragaria x ananassa HOM05D002849 ORTHO05D007186 2.7e-27 127.5 70 87.1
MELO3C004787.2 Cucumis melo HOM05D002849 ORTHO05D007186 7.8e-27 125.9 93 67.7
MELO3C012882.2 Cucumis melo HOM05D002849 ORTHO05D007186 2.3e-23 114.4 74 74.3
MELO3C034170.2 Cucumis melo HOM05D002849 ORTHO05D007186 8.6e-18 95.9 54 79.6
Gorai.007G371200 Gossypium raimondii HOM05D002849 ORTHO05D047384 8.6e-18 95.9 73 63.0
Gohir.D11G341150 Gossypium hirsutum HOM05D002849 ORTHO05D047384 4.7e-16 90.1 78 59.0
MELO3C003855.2 Cucumis melo HOM05D002849 ORTHO05D007186 8.1e-16 89.4 60 71.7
BolC5t33314H Brassica oleracea HOM05D002849 ORTHO05D024297 3.8e-13 80.5 101 46.5
TAR276G0001 Trochodendron aralioides HOM05D002849 ORTHO05D051491 5.4e-12 76.6 106 46.2
C05p45940 Brassica napus HOM05D002849 ORTHO05D024297 5.1e-10 70.1 93 43.0
Actinidia17029 Actinidia chinensis HOM05D000148 ORTHO05D000081 9.6e-09 65.9 31 90.3
BcaB01g01492 Brassica carinata HOM05D002849 ORTHO05D027174 1.2e-08 65.5 44 72.7
AL7G13010 Arabidopsis lyrata HOM05D002849 ORTHO05D007186 1.6e-08 65.1 34 73.5
A05p30360 Brassica napus HOM05D002849 ORTHO05D024297 6.9e-07 59.7 36 77.8
BraA05t21874Z Brassica rapa HOM05D002849 ORTHO05D024297 6.9e-07 59.7 36 77.8


User provided reference genes

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