Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_18521 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 5.9e-239 830.9 552 100.0
Nn1g03331 Nelumbo nucifera HOM05D003850 ORTHO05D004515 6.8e-171 604.7 553 68.9
TAR624G0821 Trochodendron aralioides HOM05D003850 ORTHO05D004515 1.0e-166 590.9 553 67.1
Aqoxy1G04110 Aquilegia oxysepala HOM05D003850 ORTHO05D004515 3.0e-166 589.3 554 62.5
QL05p069776 Quercus lobata HOM05D003850 ORTHO05D004515 4.3e-165 585.5 553 65.1
Atru.chr1.2461 Acer truncatum HOM05D003850 ORTHO05D004515 9.0e-163 577.8 556 66.2
CANSAT56G0590 Cannabis sativa HOM05D003850 ORTHO05D004515 1.5e-162 577.0 553 62.0
CSS0032808 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 9.9e-162 574.3 553 63.8
CiPaw.09G102000 Carya illinoinensis HOM05D003850 ORTHO05D004515 2.9e-161 572.8 553 67.6
Ciclev10014841m.g Citrus clementina HOM05D003850 ORTHO05D004515 6.4e-161 571.6 556 65.8
CSS0007684 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 1.7e-158 563.5 554 64.6
Eucgr.E03951 Eucalyptus grandis HOM05D003850 ORTHO05D004515 3.0e-158 562.8 552 66.5
TAR629G2665 Trochodendron aralioides HOM05D003850 ORTHO05D004515 6.6e-158 561.6 550 66.0
ATR0751G086 Amborella trichopoda HOM05D003850 ORTHO05D004515 5.6e-157 558.5 554 64.8
MSTRG.7170 Avicennia marina HOM05D003850 ORTHO05D004515 1.3e-156 557.4 553 64.6
Potri.006G009100 Populus trichocarpa HOM05D003850 ORTHO05D004515 5.3e-155 552.0 552 64.1
Glyma.09G009900 Glycine max HOM05D003850 ORTHO05D004515 2.6e-154 549.7 554 63.7
Nn1g07354 Nelumbo nucifera HOM05D003850 ORTHO05D004515 4.5e-154 548.9 552 64.1
arahy.Tifrunner.gnm1.ann1.C17RPB Arachis hypogaea HOM05D003850 ORTHO05D004515 3.8e-153 545.8 551 59.9
GSVIVG01003352001 Vitis vinifera HOM05D003850 ORTHO05D004515 3.2e-152 542.7 552 65.8
arahy.Tifrunner.gnm1.ann1.IIR6TV Arachis hypogaea HOM05D003850 ORTHO05D004515 4.6e-151 538.9 553 59.9
Lalb_Chr20g0119201 Lupinus albus HOM05D003850 ORTHO05D004515 1.8e-150 537.0 554 63.7
Duzib160G0220 Durio zibethinus HOM05D003850 ORTHO05D004515 6.7e-150 535.0 562 61.6
RhsimUnG0025700 Rhododendron simsii HOM05D003850 ORTHO05D004515 2.5e-149 533.1 594 60.1
RhsimUnG0028500 Rhododendron simsii HOM05D003850 ORTHO05D004515 2.5e-149 533.1 594 60.1
Phvul.006G143600 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 1.6e-148 530.4 576 58.3
Potri.016G015100 Populus trichocarpa HOM05D003850 ORTHO05D004515 1.6e-148 530.4 553 67.6
SalBow8G5272 Salvia bowleyana HOM05D003850 ORTHO05D004515 1.6e-148 530.4 559 61.5
THA.LOC104812992 Tarenaya hassleriana HOM05D003850 ORTHO05D004515 2.8e-148 529.6 556 60.6
MBI16_g42266_MAGBIO Magnolia biondii HOM05D003850 ORTHO05D004515 3.7e-148 529.3 554 62.5
PSO210G4264 Papaver somniferum HOM05D003850 ORTHO05D004515 5.3e-147 525.4 553 61.1
Ca_00718_v3 Cicer arietinum L. HOM05D003850 ORTHO05D004515 1.2e-146 524.2 555 58.6
VMungo0540G1287 Vigna mungo HOM05D003850 ORTHO05D004515 2.0e-146 523.5 554 59.4
HPP92_001629 Vanilla planifolia HOM05D003850 ORTHO05D004515 4.5e-146 522.3 550 55.6
PGR102G0753 Punica granatum HOM05D003850 ORTHO05D004515 7.6e-146 521.5 556 66.2
Nitab4.5_0001198g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 1.3e-145 520.8 545 60.6
Migut.M01390 Erythranthe guttata HOM05D003850 ORTHO05D004515 1.7e-145 520.4 551 57.4
Prupe.4G011300 Prunus persica HOM05D003850 ORTHO05D004515 6.5e-145 518.5 554 58.5
VMungo1215G3075 Vigna mungo HOM05D003850 ORTHO05D004515 6.5e-145 518.5 553 62.2
Glyma.15G114200 Glycine max HOM05D003850 ORTHO05D004515 4.6e-143 512.3 554 63.4
Gohir.A06G153120 Gossypium hirsutum HOM05D003850 ORTHO05D004515 4.6e-143 512.3 561 67.2
Thecc.06G232700 Theobroma cacao HOM05D003850 ORTHO05D004515 7.9e-143 511.5 562 61.0
Sopen11g006940 Solanum pennellii HOM05D003850 ORTHO05D004515 1.0e-142 511.1 552 58.2
Cc09_g00920 Coffea canephora HOM05D003850 ORTHO05D004515 1.8e-142 510.4 553 62.2
Gorai.010G186300 Gossypium raimondii HOM05D003850 ORTHO05D004515 6.7e-142 508.4 561 66.0
Phvul.003G083500 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 8.7e-142 508.1 552 61.6
arahy.Tifrunner.gnm1.ann1.97WSNQ Arachis hypogaea HOM05D003850 ORTHO05D004515 1.9e-141 506.9 562 61.0
PSO302G0165 Papaver somniferum HOM05D003850 ORTHO05D004515 1.9e-141 506.9 553 65.1
Sed0003006 Sechium edule HOM05D003850 ORTHO05D004515 2.5e-141 506.5 552 58.2
COL.COLO4_31876 Corchorus olitorius HOM05D003850 ORTHO05D004515 7.4e-141 505.0 561 66.0
Gohir.D06G159600 Gossypium hirsutum HOM05D003850 ORTHO05D004515 2.8e-140 503.1 561 66.1
arahy.Tifrunner.gnm1.ann1.0C9QHL Arachis hypogaea HOM05D003850 ORTHO05D004515 3.7e-140 502.7 564 62.8
ECA233G3046 Erigeron canadensis HOM05D003850 ORTHO05D004515 1.1e-139 501.1 559 63.9
vmacro15772 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 2.4e-139 500.0 565 66.2
Oeu002760.2 Olea europaea HOM05D003850 ORTHO05D004515 5.9e-138 495.4 586 58.9
Manes.07G088900 Manihot esculenta HOM05D003850 ORTHO05D004515 2.2e-137 493.4 549 58.8
Nitab4.5_0000143g0310 Nicotiana tabacum HOM05D003850 ORTHO05D004515 2.2e-137 493.4 544 61.0
TPR.G3343 Trifolium pratense HOM05D003850 ORTHO05D004515 8.5e-137 491.5 575 57.6
CsaV3_3G028740 Cucumis sativus L. HOM05D003850 ORTHO05D004515 1.6e-135 487.3 550 56.5
Sabra06G0006900 Salix brachista HOM05D003850 ORTHO05D004515 1.0e-134 484.6 554 57.4
SGA_v2.0_scaffold4G01878 Striga asiatica HOM05D003850 ORTHO05D004515 2.3e-134 483.4 539 61.0
Medtr2g025590 Medicago truncatula HOM05D003850 ORTHO05D004515 3.9e-134 482.6 550 61.6
Cfa000110 Carpinus fangiana HOM05D003850 ORTHO05D004515 4.3e-133 479.2 552 59.4
ClCG07G001740 Citrullus lanatus HOM05D003850 ORTHO05D004515 8.2e-132 474.9 552 56.0
Actinidia39269 Actinidia chinensis HOM05D003850 ORTHO05D004515 2.4e-131 473.4 367 72.2
Haze_08659 Corylus avellana HOM05D003850 ORTHO05D004515 6.9e-131 471.9 591 54.8
AL6G47570 Arabidopsis lyrata HOM05D003850 ORTHO05D004515 9.0e-131 471.5 555 61.4
MD05G1357300 Malus domestica HOM05D003850 ORTHO05D004515 1.2e-130 471.1 560 55.7
CiPaw.10G077600 Carya illinoinensis HOM05D003850 ORTHO05D004515 1.0e-129 468.0 507 55.4
Aa31LG9G10040 Aethionema arabicum HOM05D003850 ORTHO05D004515 2.2e-129 466.8 572 60.7
AT4G12610 Arabidopsis thaliana HOM05D003850 ORTHO05D004515 2.5e-128 463.4 558 61.6
HanXRQChr15g0470091 Helianthus annuus HOM05D003850 ORTHO05D004515 1.2e-127 461.1 537 61.6
Lj6g0013016 Lotus japonicus HOM05D003850 ORTHO05D004515 2.1e-127 460.3 552 65.0
Peaxi162Scf00558g00516 Petunia axillaris HOM05D003850 ORTHO05D004515 3.6e-127 459.5 499 61.9
Solyc11g012150.3 Solanum lycopersicum HOM05D003850 ORTHO05D004515 2.6e-125 453.4 515 57.1
PGSC0003DMG400013344 Solanum tuberosum HOM05D003850 ORTHO05D004515 4.3e-125 452.6 515 57.1
C03p36090 Brassica napus HOM05D003850 ORTHO05D004515 5.7e-125 452.2 556 64.0
Carub.0006s3188 Capsella rubella HOM05D003850 ORTHO05D004515 2.2e-124 450.3 555 61.8
BcaC01g04577 Brassica carinata HOM05D003850 ORTHO05D004515 1.4e-123 447.6 558 63.8
A03p29830 Brassica napus HOM05D003850 ORTHO05D004515 1.4e-123 447.6 556 63.3
BolC3t15918H Brassica oleracea HOM05D003850 ORTHO05D004515 1.4e-123 447.6 558 63.8
FAN25G3770 Fragaria x ananassa HOM05D003850 ORTHO05D004515 6.9e-123 445.3 599 49.2
BraA03t12173Z Brassica rapa HOM05D003850 ORTHO05D004515 1.2e-122 444.5 558 63.1
TWI63G0294 Tripterygium wilfordii HOM05D003850 ORTHO05D004515 3.4e-122 443.0 522 59.6
BcaB01g02623 Brassica carinata HOM05D003850 ORTHO05D004515 4.5e-122 442.6 545 68.3
Sabra16G0017100 Salix brachista HOM05D003850 ORTHO05D004515 4.5e-122 442.6 584 51.4
Lj2A262G45 Lonicera japonica HOM05D003850 ORTHO05D004515 2.2e-121 440.3 528 58.0
Cpa.g.sc75.120 Carica papaya HOM05D003850 ORTHO05D004515 3.8e-121 439.5 553 57.9
BcaB01g01757 Brassica carinata HOM05D003850 ORTHO05D004515 5.0e-121 439.1 549 61.4
AUR62021872 Chenopodium quinoa HOM05D003850 ORTHO05D004515 5.5e-120 435.6 555 48.5
SHI24464 Sapria himalayana HOM05D003850 ORTHO05D004515 1.2e-119 434.5 547 51.7
PSO339G3925 Papaver somniferum HOM05D003850 ORTHO05D004515 1.6e-119 434.1 559 56.7
unitig_748.g7103 Utricularia gibba HOM05D003850 ORTHO05D004515 2.7e-119 433.3 546 52.4
Sabra16G0000900 Salix brachista HOM05D003850 ORTHO05D004515 3.6e-119 433.0 565 47.8
FvH4_3g01042 Fragaria vesca HOM05D003850 ORTHO05D004515 8.8e-118 428.3 574 49.5
Mapoly0105s0015 Marchantia polymorpha HOM05D003850 ORTHO05D004515 1.5e-117 427.6 555 60.4
Sp6g04900 Schrenkiella parvula HOM05D003850 ORTHO05D004515 2.0e-117 427.2 555 62.9
BraA09t38246Z Brassica rapa HOM05D003850 ORTHO05D004515 1.7e-116 424.1 555 58.9
BolC9t56221H Brassica oleracea HOM05D003850 ORTHO05D004515 3.7e-116 422.9 551 58.3
MD10G1331000 Malus domestica HOM05D003850 ORTHO05D004515 6.3e-116 422.2 524 56.3
Lj4g0025543 Lotus japonicus HOM05D003850 ORTHO05D004515 1.4e-115 421.0 554 51.3
Thhalv10028564m.g Eutrema salsugineum HOM05D003850 ORTHO05D004515 1.6e-114 417.5 551 60.4
Zm00001eb224360 Zea mays HOM05D003850 ORTHO05D004515 1.6e-114 417.5 498 57.2
vmacro03646 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 1.3e-113 414.5 574 47.0
A09p26740 Brassica napus HOM05D003850 ORTHO05D004515 5.0e-113 412.5 555 61.1
Pp3c3_2280 Physcomitrium patens HOM05D003850 ORTHO05D004515 5.5e-112 409.1 567 52.0
CARHR253560 Cardamine hirsuta HOM05D003850 ORTHO05D004515 2.1e-111 407.1 549 57.9
FAN21G1422 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.0e-110 404.8 592 47.3
Oeu044421.3 Olea europaea HOM05D003850 ORTHO05D004515 1.0e-110 404.8 849 41.6
RcHm_v2.0_Chr5g0001581 Rosa chinensis HOM05D003850 ORTHO05D004515 1.4e-110 404.4 571 49.6
CAN.G1186.28 Capsicum annuum HOM05D003850 ORTHO05D004515 1.7e-108 397.5 553 49.0
BcaC04g21251 Brassica carinata HOM05D003850 ORTHO05D004515 8.2e-108 395.2 551 62.3
C09p33830 Brassica napus HOM05D003850 ORTHO05D004515 8.2e-108 395.2 551 62.3
Lsat_1_v5_gn_7_13561 Lactuca sativa HOM05D003850 ORTHO05D004515 4.1e-107 392.9 504 59.1
CDE04G2591 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 2.0e-106 390.6 555 50.3
Hund23984 Selenicereus undatus HOM05D003850 ORTHO05D004515 1.7e-105 387.5 567 52.7
RhsimUnG0109100 Rhododendron simsii HOM05D003850 ORTHO05D004515 1.9e-104 384.0 541 48.8
CDE06G1774 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 3.7e-100 369.8 337 62.3
MELO3C012788.2 Cucumis melo HOM05D003850 ORTHO05D004515 9.1e-99 365.2 474 53.4
Psat1g176560 Pisum sativum HOM05D003850 ORTHO05D004515 1.2e-98 364.8 474 57.8
Rhsim13G0146600 Rhododendron simsii HOM05D003850 ORTHO05D004515 6.5e-97 359.0 595 44.4
Lj8A171G42 Lonicera japonica HOM05D003850 ORTHO05D004515 1.1e-96 358.2 554 41.9
EL10Ac8g20176 Beta vulgaris HOM05D003850 ORTHO05D004515 6.1e-95 352.4 558 51.3
RcHm_v2.0_Chr5g0007791 Rosa chinensis HOM05D003850 ORTHO05D004515 4.9e-92 342.8 567 48.1
Zm00001eb398520 Zea mays HOM05D003850 ORTHO05D004515 1.0e-89 335.1 551 42.3
AagrBONN_evm.TU.Sc2ySwM_228.4136 Anthoceros agrestis HOM05D003850 ORTHO05D004515 4.3e-88 329.7 359 57.1
Duzib235G1223 Durio zibethinus HOM05D003850 ORTHO05D004515 2.2e-84 317.4 420 58.6
FAN03G2951 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.2e-82 311.6 555 42.0
FAN16G3024 Fragaria x ananassa HOM05D003850 ORTHO05D004515 5.9e-82 309.3 573 41.5
FAN11G3915 Fragaria x ananassa HOM05D003850 ORTHO05D004515 7.8e-82 308.9 571 41.0
DCAR_025996 Daucus carota HOM05D003850 ORTHO05D004515 1.0e-81 308.5 451 54.5
FvH4_3g04782 Fragaria vesca HOM05D003850 ORTHO05D004515 1.0e-81 308.5 572 41.4
FAN21G1676 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.0e-81 308.5 555 42.0
FvH4_2g22070 Fragaria vesca HOM05D003850 ORTHO05D004515 5.6e-80 302.8 569 39.9
Dinv07398 Davidia involucrata HOM05D003850 ORTHO05D004515 2.3e-78 297.4 293 75.8
QL09p006300 Quercus lobata HOM05D003850 ORTHO05D004515 8.9e-78 295.4 374 59.1
FAN24G0125 Fragaria x ananassa HOM05D003850 ORTHO05D008045 4.4e-77 293.1 569 39.5
Medtr2g025620 Medicago truncatula HOM05D003850 ORTHO05D004515 4.4e-77 293.1 531 52.4
TPR.G34491 Trifolium pratense HOM05D003850 ORTHO05D004515 1.4e-75 288.1 195 70.3
SEGI_38016 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 9.2e-75 285.4 339 51.6
AUR62012783 Chenopodium quinoa HOM05D003850 ORTHO05D004515 1.7e-73 281.2 434 44.9
TPR.G13041 Trifolium pratense HOM05D003850 ORTHO05D004515 3.4e-61 240.4 376 57.2
Peaxi162Scf00015g02110 Petunia axillaris HOM05D003850 ORTHO05D004515 9.9e-61 238.8 316 49.7
HPP92_001646 Vanilla planifolia HOM05D003850 ORTHO05D004515 1.9e-59 234.6 253 61.3
Actinidia11880 Actinidia chinensis HOM05D003850 ORTHO05D004515 1.7e-52 211.5 299 52.8
Sc17g0007710 Simmondsia chinensis HOM05D003850 ORTHO05D004515 4.6e-50 203.4 383 52.2
FAN25G2646 Fragaria x ananassa HOM05D003850 ORTHO05D004515 2.7e-42 177.6 521 33.8
Gorai.002G145900 Gossypium raimondii HOM05D003850 ORTHO05D004515 1.4e-38 165.2 184 72.8
CBR_g38333 Chara braunii HOM05D000019 ORTHO05D000002 7.9e-34 149.4 247 41.3
Lsat_1_v5_gn_5_64561 Lactuca sativa HOM05D003952 ORTHO05D004515 1.0e-33 149.1 185 61.6
HPP92_001645 Vanilla planifolia HOM05D003850 ORTHO05D004515 6.7e-33 146.4 107 66.4
SEGI_29277 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 3.2e-27 127.5 227 44.5
Gohir.D01G119450 Gossypium hirsutum HOM05D003850 ORTHO05D004515 1.3e-25 122.1 104 72.1
PSO339G5270 Papaver somniferum HOM05D003850 ORTHO05D004515 2.2e-23 114.8 224 41.1
AagrBONN_evm.TU.Sc2ySwM_228.3787 Anthoceros agrestis HOM05D003850 ORTHO05D004515 1.5e-21 108.6 235 46.8
AagrBONN_evm.TU.Sc2ySwM_228.3786 Anthoceros agrestis HOM05D003850 ORTHO05D004515 2.0e-21 108.2 140 41.4
RcHm_v2.0_Chr6g0288941 Rosa chinensis HOM05D003850 ORTHO05D004515 2.6e-21 107.8 311 36.0
TAR629G2548 Trochodendron aralioides HOM05D003850 ORTHO05D004515 1.3e-20 105.5 320 30.0
CDE06G0619 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 2.7e-18 97.8 240 40.4
Lsat_1_v5_gn_3_78300 Lactuca sativa HOM05D002115 ORTHO05D002263 2.5e-16 91.3 67 65.7
HPP92_001647 Vanilla planifolia HOM05D003850 ORTHO05D004515 2.2e-15 88.2 67 65.7
Eucgr.A01650 Eucalyptus grandis HOM05D002251 ORTHO05D004515 1.8e-14 85.1 54 68.5
VMungo0720G0179 Vigna mungo HOM05D003850 ORTHO05D004515 1.2e-13 82.4 51 68.6
arahy.Tifrunner.gnm1.ann1.N7GRQP Arachis hypogaea HOM05D003850 ORTHO05D004515 3.8e-12 77.4 74 56.8
arahy.Tifrunner.gnm1.ann1.UE8YUV Arachis hypogaea HOM05D003850 ORTHO05D004515 3.8e-12 77.4 74 56.8
arahy.Tifrunner.gnm1.ann1.5H9H8Z Arachis hypogaea HOM05D003850 ORTHO05D004515 5.0e-12 77.0 74 58.1
arahy.Tifrunner.gnm1.ann1.4A53N1 Arachis hypogaea HOM05D003850 ORTHO05D004515 1.1e-11 75.9 77 57.1
PSO384G4333 Papaver somniferum HOM05D003850 ORTHO05D004515 1.1e-11 75.9 66 56.1
Nitab4.5_0013082g0020 Nicotiana tabacum HOM05D003850 ORTHO05D004515 7.2e-11 73.2 66 56.1
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 7.9e-10 69.7 67 53.7
Nitab4.5_0006771g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 8.8e-09 66.2 67 52.2
CAN.G1186.27 Capsicum annuum HOM05D001620 ORTHO05D005461 3.3e-08 64.3 59 54.2
FAN21G0780 Fragaria x ananassa HOM05D003850 ORTHO05D004515 3.3e-08 64.3 234 33.8
CBR_g38329 Chara braunii HOM05D003850 ORTHO05D004515 5.7e-08 63.5 64 46.9
arahy.Tifrunner.gnm1.ann1.GFC3N0 Arachis hypogaea HOM05D003850 ORTHO05D004515 6.3e-07 60.1 52 59.6
SEGI_19210 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 8.2e-07 59.7 156 28.8
CARHR253550 Cardamine hirsuta HOM05D003850 ORTHO05D004515 2.4e-06 58.2 64 51.6
Aa31LG9G10030 Aethionema arabicum HOM05D003850 ORTHO05D004515 5.3e-06 57.0 49 61.2


User provided reference genes

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