Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p038542 Quercus lobata HOM05D006129 ORTHO05D007446 2.3e-196 688.7 350 100.0
QL11p038411 Quercus lobata HOM05D006129 ORTHO05D007446 3.0e-140 502.3 304 86.2
Haze_01881 Corylus avellana HOM05D006129 ORTHO05D007446 8.6e-127 457.6 304 77.3
Cfa005424 Carpinus fangiana HOM05D006129 ORTHO05D007446 1.2e-125 453.8 304 75.7
GSVIVG01031785001 Vitis vinifera HOM05D006129 ORTHO05D007446 1.5e-123 446.8 309 72.5
CiPaw.05G055300 Carya illinoinensis HOM05D006129 ORTHO05D007446 6.4e-122 441.4 304 74.7
MD10G1089000 Malus domestica HOM05D006129 ORTHO05D007446 8.0e-117 424.5 304 71.4
TAR371G0476 Trochodendron aralioides HOM05D006129 ORTHO05D007446 8.0e-117 424.5 304 71.7
Dinv42121 Davidia involucrata HOM05D006129 ORTHO05D007446 1.8e-116 423.3 304 72.0
CSS0025307 Camellia sinensis var. sinensis HOM05D006129 ORTHO05D007446 1.5e-115 420.2 304 70.1
CSS0048591 Camellia sinensis var. sinensis HOM05D006129 ORTHO05D007446 1.5e-115 420.2 304 70.1
Lalb_Chr10g0095451 Lupinus albus HOM05D006129 ORTHO05D007446 9.8e-115 417.5 304 69.1
RcHm_v2.0_Chr6g0259211 Rosa chinensis HOM05D006129 ORTHO05D007446 1.1e-113 414.1 304 68.8
CANSAT25G2181 Cannabis sativa HOM05D006129 ORTHO05D007446 1.4e-113 413.7 304 68.1
Thecc.02G095400 Theobroma cacao HOM05D006129 ORTHO05D007446 1.4e-113 413.7 304 68.8
PGR042G1055 Punica granatum HOM05D006129 ORTHO05D007446 3.2e-113 412.5 298 66.8
Dinv23594 Davidia involucrata HOM05D006129 ORTHO05D007446 7.0e-113 411.4 337 66.8
Duzib248G0151 Durio zibethinus HOM05D006129 ORTHO05D007446 2.7e-112 409.5 306 67.6
ClCG07G001810 Citrullus lanatus HOM05D006129 ORTHO05D007446 6.0e-112 408.3 304 69.1
TWI31G0609 Tripterygium wilfordii HOM05D006129 ORTHO05D007446 6.0e-112 408.3 309 67.3
Lj5P206T15 Lonicera japonica HOM05D006129 ORTHO05D007446 1.0e-111 407.5 304 69.1
Manes.17G094600 Manihot esculenta HOM05D006129 ORTHO05D007446 1.0e-111 407.5 298 68.5
Nn4g23272 Nelumbo nucifera HOM05D006129 ORTHO05D007446 1.3e-111 407.1 304 68.4
TWI79G0519 Tripterygium wilfordii HOM05D006129 ORTHO05D007446 1.3e-111 407.1 304 68.1
Ciclev10027854m.g Citrus clementina HOM05D006129 ORTHO05D007446 1.7e-111 406.8 304 66.4
Lj2g0010354 Lotus japonicus HOM05D006129 ORTHO05D007446 1.7e-111 406.8 296 70.9
FvH4_2g06900 Fragaria vesca HOM05D006129 ORTHO05D007446 2.3e-111 406.4 305 66.6
Cpa.g.sc62.53 Carica papaya HOM05D006129 ORTHO05D007446 3.0e-111 406.0 355 62.0
COL.COLO4_11724 Corchorus olitorius HOM05D006129 ORTHO05D007446 3.0e-111 406.0 309 66.7
FAN15G2181 Fragaria x ananassa HOM05D006129 ORTHO05D007446 3.9e-111 405.6 305 67.2
FAN27G0179 Fragaria x ananassa HOM05D006129 ORTHO05D007446 8.6e-111 404.4 305 66.6
MELO3C026699.2 Cucumis melo HOM05D006129 ORTHO05D007446 1.5e-110 403.7 304 68.8
FAN24G2628 Fragaria x ananassa HOM05D006129 ORTHO05D007446 2.5e-110 402.9 305 65.9
Atru.BG.82.p Acer truncatum HOM05D006129 ORTHO05D007446 7.3e-110 401.4 304 64.8
arahy.Tifrunner.gnm1.ann1.769PPM Arachis hypogaea HOM05D006129 ORTHO05D007446 3.6e-109 399.1 306 65.0
CsaV3_3G028800 Cucumis sativus L. HOM05D006129 ORTHO05D007446 8.1e-109 397.9 304 67.8
FAN20G2787 Fragaria x ananassa HOM05D006129 ORTHO05D007446 1.8e-108 396.7 305 65.9
Glyma.07G178800 Glycine max HOM05D006129 ORTHO05D007446 2.3e-108 396.4 304 65.1
Sed0004701 Sechium edule HOM05D006129 ORTHO05D007446 2.3e-108 396.4 304 66.4
Potri.009G106800 Populus trichocarpa HOM05D006129 ORTHO05D007446 5.2e-108 395.2 304 65.8
Ca_13480_v3 Cicer arietinum L. HOM05D006129 ORTHO05D007446 1.5e-107 393.7 304 66.4
vmacro02172 Vaccinium macrocarpon HOM05D006129 ORTHO05D007446 1.5e-107 393.7 304 66.8
Glyma.20G009700 Glycine max HOM05D006129 ORTHO05D007446 2.6e-107 392.9 304 65.1
VMungo0464G0688 Vigna mungo HOM05D006129 ORTHO05D007446 2.9e-106 389.4 304 64.5
Sabra09G0081600 Salix brachista HOM05D006129 ORTHO05D007446 8.3e-106 387.9 304 64.8
Rhsim11G0169300 Rhododendron simsii HOM05D006129 ORTHO05D007446 1.4e-105 387.1 302 66.6
Medtr1g026035 Medicago truncatula HOM05D006129 ORTHO05D007446 2.4e-105 386.3 304 65.1
Sc08g0000140 Simmondsia chinensis HOM05D006129 ORTHO05D007446 1.0e-103 380.9 304 64.8
Gohir.D01G006000 Gossypium hirsutum HOM05D006129 ORTHO05D007446 3.0e-103 379.4 296 64.2
Gorai.002G007000 Gossypium raimondii HOM05D006129 ORTHO05D007446 6.6e-103 378.3 296 63.9
Gohir.A01G005900 Gossypium hirsutum HOM05D006129 ORTHO05D007446 8.6e-103 377.9 296 63.2
DCAR_003623 Daucus carota HOM05D006129 ORTHO05D007446 1.1e-102 377.5 304 63.2
Phvul.002G308800 Phaseolus vulgaris HOM05D006129 ORTHO05D007446 5.6e-102 375.2 304 63.5
Aqoxy3G03484 Aquilegia oxysepala HOM05D006129 ORTHO05D007446 3.6e-101 372.5 304 63.5
MSTRG.20134 Avicennia marina HOM05D006129 ORTHO05D007446 1.4e-100 370.5 304 63.5
Eucgr.L01320 Eucalyptus grandis HOM05D006129 ORTHO05D007446 2.4e-100 369.8 306 63.7
THA.LOC104807348 Tarenaya hassleriana HOM05D006129 ORTHO05D007446 1.2e-99 367.5 304 61.2
CARHR106180 Cardamine hirsuta HOM05D006129 ORTHO05D007446 1.5e-99 367.1 341 55.7
Oeu057674.1 Olea europaea HOM05D006129 ORTHO05D007446 1.5e-99 367.1 304 62.2
EL10Ac9g21818 Beta vulgaris HOM05D006129 ORTHO05D007446 1.3e-98 364.0 304 59.9
TAR629G1168 Trochodendron aralioides HOM05D006129 ORTHO05D007446 2.2e-98 363.2 264 69.7
AL3G47590 Arabidopsis lyrata HOM05D006129 ORTHO05D007446 3.8e-98 362.5 305 60.0
Migut.B00306 Erythranthe guttata HOM05D006129 ORTHO05D007446 3.8e-98 362.5 309 60.5
Thhalv10022548m.g Eutrema salsugineum HOM05D006129 ORTHO05D007446 3.8e-98 362.5 342 55.6
Nitab4.5_0001453g0090 Nicotiana tabacum HOM05D006129 ORTHO05D007446 6.4e-98 361.7 304 60.9
Prupe.8G116000 Prunus persica HOM05D006129 ORTHO05D007446 6.4e-98 361.7 309 62.8
TPR.G26422 Trifolium pratense HOM05D006129 ORTHO05D007446 8.4e-98 361.3 304 60.9
Eucgr.L00820 Eucalyptus grandis HOM05D006129 ORTHO05D007446 1.4e-97 360.5 306 61.4
Carub.0003s2972 Capsella rubella HOM05D006129 ORTHO05D007446 7.1e-97 358.2 304 58.9
Sp3g29130 Schrenkiella parvula HOM05D006129 ORTHO05D007446 7.1e-97 358.2 304 59.2
HanXRQChr10g0303221 Helianthus annuus HOM05D006129 ORTHO05D007446 3.5e-96 355.9 340 55.0
CDE04G1903 Ceratophyllum demersum HOM05D006129 ORTHO05D007446 4.6e-96 355.5 304 58.2
ATR0665G475 Amborella trichopoda HOM05D006129 ORTHO05D007446 7.8e-96 354.8 304 59.2
AT2G15820 Arabidopsis thaliana HOM05D006129 ORTHO05D007446 1.0e-95 354.4 305 58.7
Lsat_1_v5_gn_5_113460 Lactuca sativa HOM05D006129 ORTHO05D007446 1.0e-95 354.4 340 56.8
Aa31LG8G13380 Aethionema arabicum HOM05D006129 ORTHO05D007446 3.0e-95 352.8 305 59.7
ECA234G4125 Erigeron canadensis HOM05D006129 ORTHO05D007446 3.0e-95 352.8 296 60.1
Nitab4.5_0007303g0010 Nicotiana tabacum HOM05D006129 ORTHO05D007446 3.9e-95 352.4 304 58.9
AUR62011424 Chenopodium quinoa HOM05D006129 ORTHO05D007446 1.5e-94 350.5 340 54.1
BcaC06g36090 Brassica carinata HOM05D006129 ORTHO05D007446 7.3e-94 348.2 304 56.9
A07p04960 Brassica napus HOM05D006129 ORTHO05D007446 7.3e-94 348.2 304 56.6
C07p07940 Brassica napus HOM05D006129 ORTHO05D007446 7.3e-94 348.2 304 56.9
BolC7t41212H Brassica oleracea HOM05D006129 ORTHO05D007446 7.3e-94 348.2 304 56.9
Peaxi162Scf00789g00530 Petunia axillaris HOM05D006129 ORTHO05D007446 7.3e-94 348.2 304 58.2
AUR62016636 Chenopodium quinoa HOM05D006129 ORTHO05D007446 1.6e-93 347.1 304 58.2
BcaB03g16332 Brassica carinata HOM05D006129 ORTHO05D007446 2.1e-93 346.7 304 56.6
BraA07t28289Z Brassica rapa HOM05D006129 ORTHO05D007446 2.1e-93 346.7 304 56.2
Ah.01g006750 Amaranthus hybridus HOM05D006129 ORTHO05D007446 6.2e-93 345.1 304 56.9
PGSC0003DMG400026525 Solanum tuberosum HOM05D006129 ORTHO05D007446 1.4e-92 344.0 337 55.2
Sopen11g026560 Solanum pennellii HOM05D006129 ORTHO05D007446 5.3e-92 342.0 337 55.2
Solyc11g066850.3 Solanum lycopersicum HOM05D006129 ORTHO05D007446 9.0e-92 341.3 337 54.9
HPP92_022045 Vanilla planifolia HOM05D006129 ORTHO05D007446 1.3e-90 337.4 342 52.9
Os02g0702000 Oryza sativa ssp. japonica HOM05D006129 ORTHO05D007446 2.2e-90 336.7 336 52.1
CAN.G644.34 Capsicum annuum HOM05D006129 ORTHO05D007446 2.9e-90 336.3 304 57.2
Zm00001eb251880 Zea mays HOM05D006129 ORTHO05D007446 3.8e-90 335.9 343 50.1
Actinidia12976 Actinidia chinensis HOM05D006129 ORTHO05D007446 2.7e-88 329.7 240 70.0
SGA_v2.0_scaffold58G20604 Striga asiatica HOM05D006129 ORTHO05D007446 3.5e-88 329.3 305 57.4
unitig_744.g24241 Utricularia gibba HOM05D006129 ORTHO05D007446 2.3e-87 326.6 309 56.6
Medtr0381s0010 Medicago truncatula HOM05D006129 ORTHO05D007446 8.7e-87 324.7 304 57.6
Hund00318 Selenicereus undatus HOM05D006129 ORTHO05D007446 3.6e-85 319.3 254 63.8
TAR371G0992 Trochodendron aralioides HOM05D006129 ORTHO05D007446 1.8e-76 290.4 260 61.2
SEGI_31419 Sequoiadendron giganteum HOM05D006129 ORTHO05D007446 6.0e-72 275.4 305 47.5
Atru.chr5.2887 Acer truncatum HOM05D006129 ORTHO05D007446 7.4e-70 268.5 306 49.7
Eucgr.G01504 Eucalyptus grandis HOM05D006129 ORTHO05D007446 1.2e-64 251.1 201 62.2
Cc02_g18440 Coffea canephora HOM05D006129 ORTHO05D007446 2.7e-56 223.4 183 60.1
Atru.chr5.2823 Acer truncatum HOM05D006129 ORTHO05D007446 1.8e-55 220.7 300 45.3
TAR371G0058 Trochodendron aralioides HOM05D006129 ORTHO05D007446 1.3e-53 214.5 152 74.3
Atru.chr5.2826 Acer truncatum HOM05D006129 ORTHO05D007446 3.2e-41 173.3 155 63.9
Psat6g001360 Pisum sativum HOM05D006129 ORTHO05D007446 1.8e-39 167.5 338 37.9
Atru.chr5.2881 Acer truncatum HOM05D006129 ORTHO05D007446 3.1e-36 156.8 145 60.0
AagrBONN_evm.TU.Sc2ySwM_344.1734 Anthoceros agrestis HOM05D006129 ORTHO05D007446 6.1e-24 115.9 293 27.3
Atru.chr5.2882 Acer truncatum HOM05D006129 ORTHO05D007446 1.7e-21 107.8 134 41.0
Pp3c25_10050 Physcomitrium patens HOM05D006129 ORTHO05D007446 3.1e-20 103.6 305 27.2
SMO356G0628 Selaginella moellendorffii HOM05D006129 ORTHO05D007446 4.2e-17 93.2 292 24.3
Mapoly0036s0055 Marchantia polymorpha HOM05D006129 ORTHO05D007446 8.0e-08 62.4 152 29.6
AagrBONN_evm.TU.Sc2ySwM_344.5085 Anthoceros agrestis HOM05D006129 ORTHO05D007446 5.2e-07 59.7 110 33.6


User provided reference genes

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