Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p020799 Quercus lobata HOM05D005687 ORTHO05D007098 6.7e-104 380.9 229 100.0
Lj7A623G45 Lonicera japonica HOM05D005687 ORTHO05D007098 4.4e-23 112.5 109 56.0
GSVIVG01034468001 Vitis vinifera HOM05D005687 ORTHO05D007098 2.9e-22 109.8 105 52.4
DCAR_017367 Daucus carota HOM05D005687 ORTHO05D007098 3.7e-22 109.4 103 54.4
Dinv41744 Davidia involucrata HOM05D005687 ORTHO05D007098 3.7e-22 109.4 103 54.4
CANSAT35G0683 Cannabis sativa HOM05D005687 ORTHO05D007098 4.9e-22 109.0 88 59.1
CiPaw.08G002200 Carya illinoinensis HOM05D005687 ORTHO05D007098 6.4e-22 108.6 103 54.4
HanXRQChr02g0044211 Helianthus annuus HOM05D005687 ORTHO05D007098 8.3e-22 108.2 103 54.4
Manes.18G104200 Manihot esculenta HOM05D005687 ORTHO05D007098 8.3e-22 108.2 88 59.1
Lj3g0026050 Lotus japonicus HOM05D005687 ORTHO05D007098 1.1e-21 107.8 109 54.1
MD08G1219300 Malus domestica HOM05D005687 ORTHO05D007098 1.1e-21 107.8 103 53.4
Peaxi162Scf00391g00732 Petunia axillaris HOM05D005687 ORTHO05D007098 1.1e-21 107.8 115 50.4
TWI59G0019 Tripterygium wilfordii HOM05D005687 ORTHO05D007098 1.1e-21 107.8 88 59.1
TAR376G0067 Trochodendron aralioides HOM05D005687 ORTHO05D007098 1.1e-21 107.8 103 52.4
Lsat_1_v5_gn_1_12201 Lactuca sativa HOM05D005687 ORTHO05D007098 1.9e-21 107.1 103 53.4
Phvul.011G001500 Phaseolus vulgaris HOM05D005687 ORTHO05D007098 1.9e-21 107.1 88 59.1
Prupe.1G553700 Prunus persica HOM05D005687 ORTHO05D007098 1.9e-21 107.1 103 52.4
PGR042G3796 Punica granatum HOM05D005687 ORTHO05D007098 1.9e-21 107.1 103 53.4
vmacro00992 Vaccinium macrocarpon HOM05D005687 ORTHO05D007098 1.9e-21 107.1 103 53.4
VMungo1127G0635 Vigna mungo HOM05D005687 ORTHO05D007098 1.9e-21 107.1 88 59.1
FvH4_5g32030 Fragaria vesca HOM05D005687 ORTHO05D007098 2.4e-21 106.7 111 48.6
FAN08G1133 Fragaria x ananassa HOM05D005687 ORTHO05D007098 2.4e-21 106.7 111 48.6
FAN18G2804 Fragaria x ananassa HOM05D005687 ORTHO05D007098 2.4e-21 106.7 111 48.6
Medtr4g033210 Medicago truncatula HOM05D005687 ORTHO05D007098 2.4e-21 106.7 115 52.2
Potri.013G107800 Populus trichocarpa HOM05D005687 ORTHO05D007098 2.4e-21 106.7 103 54.4
QL02p026060 Quercus lobata HOM05D005687 ORTHO05D007098 2.4e-21 106.7 88 59.1
RcHm_v2.0_Chr7g0228031 Rosa chinensis HOM05D005687 ORTHO05D007098 2.4e-21 106.7 111 48.6
Sabra13G0093200 Salix brachista HOM05D005687 ORTHO05D007098 2.4e-21 106.7 103 54.4
Solyc11g022390.2 Solanum lycopersicum HOM05D005687 ORTHO05D007098 2.4e-21 106.7 115 49.6
PGSC0003DMG401009270 Solanum tuberosum HOM05D005687 ORTHO05D007098 2.4e-21 106.7 115 49.6
arahy.Tifrunner.gnm1.ann1.BDG91C Arachis hypogaea HOM05D005687 ORTHO05D007098 3.2e-21 106.3 88 58.0
arahy.Tifrunner.gnm1.ann1.H6WZRG Arachis hypogaea HOM05D005687 ORTHO05D007098 3.2e-21 106.3 88 58.0
Nitab4.5_0001534g0050 Nicotiana tabacum HOM05D005687 ORTHO05D007098 3.2e-21 106.3 115 49.6
Nitab4.5_0003826g0010 Nicotiana tabacum HOM05D005687 ORTHO05D007098 3.2e-21 106.3 115 49.6
TPR.G34137 Trifolium pratense HOM05D005687 ORTHO05D007098 3.2e-21 106.3 88 59.1
CSS0035020 Camellia sinensis var. sinensis HOM05D005687 ORTHO05D007098 4.1e-21 105.9 103 52.4
CSS0048983 Camellia sinensis var. sinensis HOM05D005687 ORTHO05D007098 4.1e-21 105.9 103 52.4
ECA247G1762 Erigeron canadensis HOM05D005687 ORTHO05D007098 4.1e-21 105.9 103 53.4
Nn5g27549 Nelumbo nucifera HOM05D005687 ORTHO05D007098 4.1e-21 105.9 103 52.4
Psat7g144520 Pisum sativum HOM05D005687 ORTHO05D007098 4.1e-21 105.9 88 58.0
Actinidia01555 Actinidia chinensis HOM05D005687 ORTHO05D007098 5.4e-21 105.5 103 53.4
Aa31LG4G8560 Aethionema arabicum HOM05D005687 ORTHO05D007098 7.1e-21 105.1 111 48.6
BcaB03g14944 Brassica carinata HOM05D005687 ORTHO05D007098 7.1e-21 105.1 111 48.6
Cc10_g10120 Coffea canephora HOM05D005687 ORTHO05D007098 7.1e-21 105.1 103 52.4
Thhalv10018307m.g Eutrema salsugineum HOM05D005687 ORTHO05D007098 7.1e-21 105.1 111 48.6
Gohir.D05G275400 Gossypium hirsutum HOM05D005687 ORTHO05D007098 7.1e-21 105.1 103 52.4
Migut.C01307 Erythranthe guttata HOM05D005687 ORTHO05D007098 9.2e-21 104.8 103 52.4
Gorai.009G288500 Gossypium raimondii HOM05D005687 ORTHO05D007098 9.2e-21 104.8 88 56.8
MD15G1407900 Malus domestica HOM05D005687 ORTHO05D007098 9.2e-21 104.8 103 52.4
SGA_v2.0_scaffold118G32517 Striga asiatica HOM05D005687 ORTHO05D007098 9.2e-21 104.8 103 51.5
Hma1.2p1_0004F.1_g003990 Hydrangea macrophylla HOM05D005687 ORTHO05D007098 1.2e-20 104.4 103 50.5
Hma1.2p1_0004F.1_g004000 Hydrangea macrophylla HOM05D005687 ORTHO05D007098 1.2e-20 104.4 103 50.5
SalBow6G3036 Salvia bowleyana HOM05D005687 ORTHO05D007098 1.2e-20 104.4 103 53.4
Sed0023668 Sechium edule HOM05D005687 ORTHO05D007098 1.2e-20 104.4 107 48.6
Sc01g0001920 Simmondsia chinensis HOM05D005687 ORTHO05D007098 1.2e-20 104.4 103 51.5
Thecc.08G189500 Theobroma cacao HOM05D005687 ORTHO05D007098 1.2e-20 104.4 103 52.4
Cpa.g.sc66.10 Carica papaya HOM05D005687 ORTHO05D007098 1.6e-20 104.0 103 52.4
Gohir.A05G273000 Gossypium hirsutum HOM05D005687 ORTHO05D007098 1.6e-20 104.0 103 51.5
CARHR064900 Cardamine hirsuta HOM05D005687 ORTHO05D007098 2.1e-20 103.6 111 48.6
AUR62004616 Chenopodium quinoa HOM05D005687 ORTHO05D007098 2.1e-20 103.6 103 51.5
AUR62022645 Chenopodium quinoa HOM05D005687 ORTHO05D007098 2.1e-20 103.6 103 51.5
COL.COLO4_15121 Corchorus olitorius HOM05D005687 ORTHO05D007098 2.1e-20 103.6 88 55.7
CAN.G155.2 Capsicum annuum HOM05D005687 ORTHO05D007098 2.7e-20 103.2 117 47.9
Cfa012938 Carpinus fangiana HOM05D005687 ORTHO05D007098 2.7e-20 103.2 109 52.3
Ciclev10000582m.g Citrus clementina HOM05D005687 ORTHO05D007098 2.7e-20 103.2 103 50.5
FAN04G0407 Fragaria x ananassa HOM05D005687 ORTHO05D007098 2.7e-20 103.2 111 47.7
Glyma.12G001400 Glycine max HOM05D005687 ORTHO05D007098 2.7e-20 103.2 88 56.8
Sp5g27150 Schrenkiella parvula HOM05D005687 ORTHO05D007098 2.7e-20 103.2 111 46.8
Sopen11g011260 Solanum pennellii HOM05D005687 ORTHO05D007098 2.7e-20 103.2 115 48.7
AL2G31710 Arabidopsis lyrata HOM05D005687 ORTHO05D007098 3.5e-20 102.8 111 47.7
AT1G72090 Arabidopsis thaliana HOM05D005687 ORTHO05D007098 3.5e-20 102.8 111 47.7
MSTRG.1558 Avicennia marina HOM05D005687 ORTHO05D007098 3.5e-20 102.8 103 51.5
Carub.0002s1887 Capsella rubella HOM05D005687 ORTHO05D007098 3.5e-20 102.8 111 47.7
Ca_19701_v3 Cicer arietinum L. HOM05D005687 ORTHO05D007098 3.5e-20 102.8 88 58.0
MELO3C022220.2 Cucumis melo HOM05D005687 ORTHO05D007098 4.6e-20 102.4 103 50.5
CsaV3_5G040460 Cucumis sativus L. HOM05D005687 ORTHO05D007098 4.6e-20 102.4 103 50.5
Aqoxy5G02668 Aquilegia oxysepala HOM05D005687 ORTHO05D007098 6.0e-20 102.1 103 50.5
EL10Ac1g00122 Beta vulgaris HOM05D005687 ORTHO05D007098 6.0e-20 102.1 103 50.5
BcaC08g46660 Brassica carinata HOM05D005687 ORTHO05D007098 6.0e-20 102.1 111 45.9
A07p38240 Brassica napus HOM05D005687 ORTHO05D007098 6.0e-20 102.1 88 54.5
C06p46310 Brassica napus HOM05D005687 ORTHO05D007098 6.0e-20 102.1 88 54.5
BraA07t31389Z Brassica rapa HOM05D005687 ORTHO05D007098 6.0e-20 102.1 88 54.5
ClCG08G000280 Citrullus lanatus HOM05D005687 ORTHO05D007098 6.0e-20 102.1 103 50.5
Eucgr.F03000 Eucalyptus grandis HOM05D005687 ORTHO05D007098 6.0e-20 102.1 88 54.5
Lalb_Chr19g0140501 Lupinus albus HOM05D005687 ORTHO05D007098 7.8e-20 101.7 88 55.7
Hund16781 Selenicereus undatus HOM05D005687 ORTHO05D007098 7.8e-20 101.7 103 50.5
unitig_32.g11184 Utricularia gibba HOM05D001035 ORTHO05D007098 1.0e-19 101.3 103 50.5
Zm00001eb422680 Zea mays HOM05D005687 ORTHO05D007098 1.0e-19 101.3 113 47.8
THA.LOC104800128 Tarenaya hassleriana HOM05D005687 ORTHO05D007098 1.3e-19 100.9 111 45.9
BolC6t39676H Brassica oleracea HOM05D005687 ORTHO05D007098 1.7e-19 100.5 88 52.3
C06p46220 Brassica napus HOM05D005687 ORTHO05D007098 2.3e-19 100.1 113 47.8
PSO017G1535 Papaver somniferum HOM05D005687 ORTHO05D007098 3.0e-19 99.8 88 55.7
PSO170G1542 Papaver somniferum HOM05D005687 ORTHO05D007098 3.9e-19 99.4 88 54.5
Atru.chr13.2348 Acer truncatum HOM05D005687 ORTHO05D007098 5.1e-19 99.0 88 54.5
CDE06G1536 Ceratophyllum demersum HOM05D005687 ORTHO05D007098 5.1e-19 99.0 103 48.5
Mapoly0002s0019 Marchantia polymorpha HOM05D005687 ORTHO05D007098 8.6e-19 98.2 103 49.5
Haze_21291 Corylus avellana HOM05D005687 ORTHO05D007098 1.1e-18 97.8 94 52.1
ATR1134G072 Amborella trichopoda HOM05D005687 ORTHO05D007098 1.5e-18 97.4 103 49.5
Os04g0434300 Oryza sativa ssp. japonica HOM05D005687 ORTHO05D007098 1.5e-18 97.4 88 52.3
HPP92_016134 Vanilla planifolia HOM05D005687 ORTHO05D007098 1.9e-18 97.1 103 49.5
SEGI_17032 Sequoiadendron giganteum HOM05D005687 ORTHO05D007098 2.5e-18 96.7 88 52.3
SGA_v2.0_scaffold118G32527 Striga asiatica HOM05D005687 ORTHO05D007098 1.6e-17 94.0 103 47.6
Pp3c6_10380 Physcomitrium patens HOM05D005687 ORTHO05D007098 4.7e-17 92.4 108 47.2
SMO116G0266 Selaginella moellendorffii HOM05D005687 ORTHO05D007098 4.7e-17 92.4 100 48.0
AagrBONN_evm.TU.Sc2ySwM_344.3251 Anthoceros agrestis HOM05D005687 ORTHO05D007098 4.0e-16 89.4 116 44.0
CBR_g25878 Chara braunii HOM05D005687 ORTHO05D007098 1.5e-15 87.4 115 42.6
Glyma.08G239201 Glycine max HOM05D005687 ORTHO05D007098 6.4e-14 82.0 79 51.9
Glyma.02G018600 Glycine max HOM05D005687 ORTHO05D007098 2.1e-12 77.0 82 46.3
MCO07G120 Micromonas commoda HOM05D005687 ORTHO05D007098 4.6e-12 75.9 99 40.4
PRCOL_00002733 Prasinoderma coloniale HOM05D005687 ORTHO05D007098 6.6e-11 72.0 100 37.0
SMO270G0057 Selaginella moellendorffii HOM05D005687 ORTHO05D007098 8.7e-11 71.6 74 47.3
SMO270G0133 Selaginella moellendorffii HOM05D005687 ORTHO05D007098 8.7e-11 71.6 74 47.3
Cre03.g149300 Chlamydomonas reinhardtii HOM05D005687 ORTHO05D007098 2.5e-10 70.1 110 40.0
SMO306G0020 Selaginella moellendorffii HOM05D005687 ORTHO05D007098 2.5e-10 70.1 74 47.3
SMO306G0012 Selaginella moellendorffii HOM05D014392 ORTHO05D011519 9.0e-08 61.6 45 55.6


User provided reference genes

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