Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G251800 Prunus persica HOM05D003686 ORTHO05D004322 1.3e-77 293.5 208 100.0
RcHm_v2.0_Chr6g0292481 Rosa chinensis HOM05D003686 ORTHO05D004322 1.6e-56 223.4 209 62.7
Eucgr.A00286 Eucalyptus grandis HOM05D003686 ORTHO05D004322 4.9e-53 211.8 214 58.4
FAN20G0133 Fragaria x ananassa HOM05D003686 ORTHO05D004322 4.9e-53 211.8 209 61.7
FAN27G0391 Fragaria x ananassa HOM05D003686 ORTHO05D004322 4.9e-53 211.8 209 61.7
CANSAT78G2257 Cannabis sativa HOM05D003686 ORTHO05D004322 5.4e-52 208.4 218 62.8
Haze_04804 Corylus avellana HOM05D003686 ORTHO05D004322 2.0e-51 206.5 208 55.8
FAN15G3346 Fragaria x ananassa HOM05D003686 ORTHO05D004322 2.0e-51 206.5 212 60.8
Atru.chr5.1287 Acer truncatum HOM05D003686 ORTHO05D004322 2.7e-51 206.1 212 64.6
FvH4_2g24650 Fragaria vesca HOM05D003686 ORTHO05D004322 2.7e-51 206.1 209 60.3
TWI14G0352 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 6.0e-51 204.9 207 63.3
Potri.003G058400 Populus trichocarpa HOM05D003686 ORTHO05D004322 3.9e-50 202.2 208 58.7
MD03G1275200 Malus domestica HOM05D003686 ORTHO05D004322 5.0e-50 201.8 209 60.8
COL.COLO4_08036 Corchorus olitorius HOM05D003686 ORTHO05D004322 4.3e-49 198.7 213 65.7
QL07p015848 Quercus lobata HOM05D003686 ORTHO05D004322 1.2e-48 197.2 211 51.7
QL93p0358_0011 Quercus lobata HOM05D003686 ORTHO05D004322 1.2e-48 197.2 211 57.8
Gorai.004G053600 Gossypium raimondii HOM05D003686 ORTHO05D004322 2.1e-48 196.4 208 58.2
TWI23G0547 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 2.1e-48 196.4 116 83.6
Gohir.D08G053600 Gossypium hirsutum HOM05D003686 ORTHO05D004322 2.8e-48 196.1 209 58.9
Eucgr.B02749 Eucalyptus grandis HOM05D003686 ORTHO05D004322 6.2e-48 194.9 115 84.3
Ciclev10022350m.g Citrus clementina HOM05D003686 ORTHO05D004322 8.0e-48 194.5 115 85.2
Gohir.A08G043900 Gossypium hirsutum HOM05D003686 ORTHO05D004322 8.0e-48 194.5 208 57.2
Gohir.D11G123300 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.8e-47 193.4 214 55.6
Manes.05G068800 Manihot esculenta HOM05D003686 ORTHO05D004322 1.8e-47 193.4 121 80.2
MD11G1297300 Malus domestica HOM05D003686 ORTHO05D004322 3.1e-47 192.6 208 61.1
Gorai.007G132200 Gossypium raimondii HOM05D003686 ORTHO05D004322 4.0e-47 192.2 213 62.0
Manes.01G213100 Manihot esculenta HOM05D003686 ORTHO05D004322 8.9e-47 191.0 121 78.5
PGR031G1643 Punica granatum HOM05D003686 ORTHO05D004322 8.9e-47 191.0 210 61.0
Gohir.A11G118400 Gossypium hirsutum HOM05D003686 ORTHO05D004322 2.0e-46 189.9 213 61.0
Cfa010467 Carpinus fangiana HOM05D003686 ORTHO05D004322 3.4e-46 189.1 113 81.4
QL04p005272 Quercus lobata HOM05D003686 ORTHO05D004322 4.4e-46 188.7 211 49.8
CiPaw.07G099200 Carya illinoinensis HOM05D003686 ORTHO05D004322 9.8e-46 187.6 208 53.8
Nn1g08910 Nelumbo nucifera HOM05D003686 ORTHO05D004322 4.9e-45 185.3 125 75.2
TAR636G2878 Trochodendron aralioides HOM05D003686 ORTHO05D004322 8.3e-45 184.5 209 52.2
VMungo0720G0802 Vigna mungo HOM05D003686 ORTHO05D004322 8.3e-45 184.5 212 58.5
Duzib133G0241 Durio zibethinus HOM05D003686 ORTHO05D004322 1.4e-44 183.7 214 57.9
Sed0010038 Sechium edule HOM05D003686 ORTHO05D004322 1.4e-44 183.7 209 57.4
GSVIVG01011011001 Vitis vinifera HOM05D003686 ORTHO05D004322 1.4e-44 183.7 126 75.4
Glyma.10G021900 Glycine max HOM05D003686 ORTHO05D004322 1.9e-44 183.3 214 50.9
Cpa.g.sc9.157 Carica papaya HOM05D003686 ORTHO05D004322 3.2e-44 182.6 211 59.2
TAR362G1277 Trochodendron aralioides HOM05D003686 ORTHO05D004322 7.0e-44 181.4 119 76.5
CiPaw.08G100800 Carya illinoinensis HOM05D003686 ORTHO05D004322 9.2e-44 181.0 208 64.4
Thecc.10G102800 Theobroma cacao HOM05D003686 ORTHO05D004322 3.5e-43 179.1 115 80.9
Aqoxy2G03146 Aquilegia oxysepala HOM05D003686 ORTHO05D004322 6.0e-43 178.3 204 51.5
Duzib138G0197 Durio zibethinus HOM05D003686 ORTHO05D004322 1.0e-42 177.6 103 86.4
Glyma.02G152300 Glycine max HOM05D003686 ORTHO05D004322 2.3e-42 176.4 121 75.2
Phvul.007G166600 Phaseolus vulgaris HOM05D003686 ORTHO05D004322 2.3e-42 176.4 214 57.9
Lalb_Chr06g0163281 Lupinus albus HOM05D003686 ORTHO05D004322 5.1e-42 175.3 215 53.5
TPR.G15798 Trifolium pratense HOM05D003686 ORTHO05D004322 5.1e-42 175.3 212 59.9
Os02g0266100 Oryza sativa ssp. japonica HOM05D003686 ORTHO05D004322 6.6e-42 174.9 124 74.2
Lalb_Chr02g0143061 Lupinus albus HOM05D003686 ORTHO05D004322 1.1e-41 174.1 214 53.7
MSTRG.21821 Avicennia marina HOM05D003686 ORTHO05D004322 2.5e-41 172.9 121 73.6
Thhalv10028986m.g Eutrema salsugineum HOM05D003686 ORTHO05D004322 2.5e-41 172.9 116 75.9
ClCG09G006530 Citrullus lanatus HOM05D003686 ORTHO05D004322 3.3e-41 172.6 108 80.6
TAR365G0683 Trochodendron aralioides HOM05D003686 ORTHO05D004322 4.3e-41 172.2 210 51.4
CsaV3_7G028310 Cucumis sativus L. HOM05D003686 ORTHO05D004322 5.6e-41 171.8 115 76.5
Sp6g03160 Schrenkiella parvula HOM05D003686 ORTHO05D004322 5.6e-41 171.8 116 75.0
FAN20G1534 Fragaria x ananassa HOM05D003686 ORTHO05D004322 9.5e-41 171.0 192 58.3
Actinidia00703 Actinidia chinensis HOM05D003686 ORTHO05D004322 1.6e-40 170.2 213 56.8
A03p30600 Brassica napus HOM05D003686 ORTHO05D004322 1.6e-40 170.2 116 75.0
MELO3C015891.2 Cucumis melo HOM05D003686 ORTHO05D004322 1.6e-40 170.2 115 75.7
BcaB05g23688 Brassica carinata HOM05D003686 ORTHO05D004322 6.2e-40 168.3 116 74.1
BcaB05g23689 Brassica carinata HOM05D003686 ORTHO05D004322 6.2e-40 168.3 116 74.1
THA.LOC104826011 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 8.1e-40 167.9 116 74.1
FAN24G2968 Fragaria x ananassa HOM05D003686 ORTHO05D004322 1.1e-39 167.5 192 55.2
CARHR251560 Cardamine hirsuta HOM05D003686 ORTHO05D004322 1.8e-39 166.8 117 73.5
BcaB01g02510 Brassica carinata HOM05D003686 ORTHO05D004322 2.3e-39 166.4 114 74.6
CDE11G0890 Ceratophyllum demersum HOM05D003686 ORTHO05D004322 2.3e-39 166.4 124 71.8
BraA03t12240Z Brassica rapa HOM05D003686 ORTHO05D004322 4.0e-39 165.6 114 74.6
BcaC01g06704 Brassica carinata HOM05D003686 ORTHO05D004322 5.2e-39 165.2 114 73.7
Migut.N00130 Erythranthe guttata HOM05D003686 ORTHO05D004322 6.8e-39 164.9 121 72.7
Sed0008045 Sechium edule HOM05D003686 ORTHO05D004322 6.8e-39 164.9 105 81.0
Zm00001eb203990 Zea mays HOM05D003686 ORTHO05D004322 6.8e-39 164.9 118 74.6
C03p37160 Brassica napus HOM05D003686 ORTHO05D004322 8.9e-39 164.5 114 73.7
Medtr7g107640 Medicago truncatula HOM05D003686 ORTHO05D004322 1.2e-38 164.1 120 70.8
Lj5g0005016 Lotus japonicus HOM05D003686 ORTHO05D004322 1.5e-38 163.7 216 52.8
AT4G03120 Arabidopsis thaliana HOM05D003686 ORTHO05D004322 2.0e-38 163.3 116 72.4
BcaB01g01979 Brassica carinata HOM05D003686 ORTHO05D004322 2.6e-38 162.9 208 61.1
Lsat_1_v5_gn_5_188760 Lactuca sativa HOM05D003686 ORTHO05D004322 2.6e-38 162.9 119 71.4
BolC3t16013H Brassica oleracea HOM05D003686 ORTHO05D004322 3.4e-38 162.5 113 73.5
Medtr1g088990 Medicago truncatula HOM05D003686 ORTHO05D004322 3.4e-38 162.5 117 73.5
PSO801G0146 Papaver somniferum HOM05D003686 ORTHO05D004322 4.4e-38 162.2 122 69.7
ATR0706G002 Amborella trichopoda HOM05D003686 ORTHO05D004322 5.8e-38 161.8 124 68.5
Lj1g0025208 Lotus japonicus HOM05D003686 ORTHO05D004322 5.8e-38 161.8 216 47.7
Ca_09109_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 9.9e-38 161.0 120 70.8
Rhsim13G0017700 Rhododendron simsii HOM05D003686 ORTHO05D004322 9.9e-38 161.0 226 44.7
Nitab4.5_0000295g0050 Nicotiana tabacum HOM05D003686 ORTHO05D004322 1.7e-37 160.2 121 69.4
DCAR_007018 Daucus carota HOM05D003686 ORTHO05D004322 2.2e-37 159.8 121 71.9
Ca_10377_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 4.9e-37 158.7 209 50.2
Ca_29655_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 4.9e-37 158.7 209 50.2
Sabra03G0032800 Salix brachista HOM05D003686 ORTHO05D004322 6.4e-37 158.3 191 50.8
BolC9t53184H Brassica oleracea HOM05D003686 ORTHO05D004322 8.3e-37 157.9 206 60.7
Solyc01g067830.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 1.1e-36 157.5 121 68.6
A09p02440 Brassica napus HOM05D003686 ORTHO05D004322 1.4e-36 157.1 112 71.4
BraA09t35891Z Brassica rapa HOM05D003686 ORTHO05D004322 1.4e-36 157.1 112 71.4
Solyc06g008860.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 2.4e-36 156.4 121 68.6
Sopen06g003610 Solanum pennellii HOM05D003686 ORTHO05D004322 2.4e-36 156.4 121 68.6
Hma1.2p1_0643F.1_g194700 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 4.1e-36 155.6 116 69.8
Hma1.2p1_0643F.1_g194711 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 4.1e-36 155.6 116 69.8
Dinv11293 Davidia involucrata HOM05D003686 ORTHO05D004322 5.4e-36 155.2 211 55.5
PGSC0003DMG400021997 Solanum tuberosum HOM05D003686 ORTHO05D004322 5.4e-36 155.2 121 67.8
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 7.1e-36 154.8 105 77.1
Sopen01g029780 Solanum pennellii HOM05D003686 ORTHO05D004322 9.2e-36 154.5 121 67.8
BolC2t10013H Brassica oleracea HOM05D003686 ORTHO05D004322 1.2e-35 154.1 114 71.1
THA.LOC104817532 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 1.2e-35 154.1 116 69.0
Dinv11297 Davidia involucrata HOM05D003686 ORTHO05D004322 1.6e-35 153.7 211 55.0
CAN.G1006.23 Capsicum annuum HOM05D003686 ORTHO05D004322 2.1e-35 153.3 121 66.9
vmacro17192 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 2.1e-35 153.3 208 46.6
PGSC0003DMG400022854 Solanum tuberosum HOM05D003686 ORTHO05D004322 3.5e-35 152.5 115 69.6
BcaC03g16209 Brassica carinata HOM05D003686 ORTHO05D004322 4.6e-35 152.1 113 70.8
BraA02t07500Z Brassica rapa HOM05D003686 ORTHO05D004322 4.6e-35 152.1 114 68.4
CAN.G185.6 Capsicum annuum HOM05D003686 ORTHO05D004322 4.6e-35 152.1 119 67.2
ECA248G2178 Erigeron canadensis HOM05D003686 ORTHO05D004322 6.0e-35 151.8 119 68.1
Psat3g024960 Pisum sativum HOM05D003686 ORTHO05D004322 6.0e-35 151.8 113 70.8
Hma1.2p1_0643F.1_g194695 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 7.8e-35 151.4 112 70.5
Hma1.2p1_0643F.1_g194710 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 7.8e-35 151.4 112 70.5
arahy.Tifrunner.gnm1.ann1.MV1AMG Arachis hypogaea HOM05D003686 ORTHO05D004322 1.0e-34 151.0 110 73.6
DCAR_012430 Daucus carota HOM05D003686 ORTHO05D004322 1.3e-34 150.6 119 68.9
HanXRQChr01g0002781 Helianthus annuus HOM05D003686 ORTHO05D004322 1.7e-34 150.2 117 69.2
Nitab4.5_0004238g0080 Nicotiana tabacum HOM05D003686 ORTHO05D004322 1.7e-34 150.2 121 66.1
ECA247G2101 Erigeron canadensis HOM05D003686 ORTHO05D004322 3.0e-34 149.4 114 67.5
Peaxi162Scf01364g00015 Petunia axillaris HOM05D003686 ORTHO05D004322 8.6e-34 147.9 113 67.3
Carub.0006s3393 Capsella rubella HOM05D003686 ORTHO05D004322 1.1e-33 147.5 93 76.3
HanXRQChr11g0330151 Helianthus annuus HOM05D003686 ORTHO05D004322 1.1e-33 147.5 117 69.2
A02p25120 Brassica napus HOM05D003686 ORTHO05D004322 7.3e-33 144.8 124 62.9
PSO339G4974 Papaver somniferum HOM05D003686 ORTHO05D004322 9.5e-33 144.4 121 62.0
Sc25g0004660 Simmondsia chinensis HOM05D003686 ORTHO05D004322 9.5e-33 144.4 105 70.5
Mapoly0103s0046 Marchantia polymorpha HOM05D003686 ORTHO05D004322 2.8e-32 142.9 122 64.8
Cc01_g20160 Coffea canephora HOM05D003686 ORTHO05D004322 1.4e-31 140.6 138 56.5
COL.COLO4_34092 Corchorus olitorius HOM05D003686 ORTHO05D004322 1.4e-31 140.6 120 64.2
Nn2g12370 Nelumbo nucifera HOM05D003686 ORTHO05D004322 6.8e-31 138.3 186 47.3
SGA_v2.0_scaffold36G14363 Striga asiatica HOM05D003686 ORTHO05D004322 8.9e-31 137.9 116 63.8
AUR62025901 Chenopodium quinoa HOM05D003686 ORTHO05D004322 4.4e-30 135.6 115 64.3
AUR62025902 Chenopodium quinoa HOM05D003686 ORTHO05D004322 4.4e-30 135.6 115 64.3
arahy.Tifrunner.gnm1.ann1.TAZ1K7 Arachis hypogaea HOM05D003686 ORTHO05D004322 5.8e-30 135.2 140 57.9
Psat6g168000 Pisum sativum HOM05D003686 ORTHO05D004322 2.2e-29 133.3 195 52.8
Mapoly0087s0074 Marchantia polymorpha HOM05D003686 ORTHO05D004322 2.9e-29 132.9 120 63.3
unitig_61.g26148 Utricularia gibba HOM05D003686 ORTHO05D004322 3.8e-29 132.5 114 58.8
Pp3c12_26180 Physcomitrium patens HOM05D003686 ORTHO05D004322 4.9e-29 132.1 115 61.7
Ah.12g061550 Amaranthus hybridus HOM05D003686 ORTHO05D004322 8.4e-29 131.3 112 67.9
Migut.N02118 Erythranthe guttata HOM05D003686 ORTHO05D004322 8.4e-29 131.3 115 63.5
Migut.O00643 Erythranthe guttata HOM05D003686 ORTHO05D004322 8.4e-29 131.3 115 63.5
Pp3c4_170 Physcomitrium patens HOM05D003686 ORTHO05D004322 8.4e-29 131.3 115 61.7
CSS0048633 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 2.4e-28 129.8 116 59.5
AUR62029649 Chenopodium quinoa HOM05D003686 ORTHO05D004322 3.2e-28 129.4 110 66.4
CSS0007511 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 9.2e-28 127.9 105 65.7
CSS0037271 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 9.2e-28 127.9 105 65.7
Nitab4.5_0001149g0030 Nicotiana tabacum HOM05D003686 ORTHO05D004322 1.6e-27 127.1 121 62.0
MSTRG.12592 Avicennia marina HOM05D003686 ORTHO05D004322 2.7e-27 126.3 98 65.3
Nitab4.5_0001624g0040 Nicotiana tabacum HOM05D003686 ORTHO05D004322 6.0e-27 125.2 121 61.2
Oeu022800.1 Olea europaea HOM05D003686 ORTHO05D004322 7.8e-27 124.8 103 64.1
Oeu022802.1 Olea europaea HOM05D003686 ORTHO05D004322 7.8e-27 124.8 103 64.1
AagrBONN_evm.TU.Sc2ySwM_228.930 Anthoceros agrestis HOM05D003686 ORTHO05D004322 1.0e-26 124.4 115 60.0
SGA_v2.0_scaffold172G39059 Striga asiatica HOM05D003686 ORTHO05D004322 1.0e-26 124.4 132 53.8
HPP92_021461 Vanilla planifolia HOM05D003686 ORTHO05D004322 1.0e-26 124.4 105 66.7
EL10Ac2g03326 Beta vulgaris HOM05D003686 ORTHO05D004322 1.3e-26 124.0 105 63.8
SalBow6G6913 Salvia bowleyana HOM05D003686 ORTHO05D004322 2.3e-26 123.2 106 62.3
SalBow8G5349 Salvia bowleyana HOM05D003686 ORTHO05D004322 2.3e-26 123.2 106 62.3
Lj2P1184T34 Lonicera japonica HOM05D003686 ORTHO05D004322 3.0e-26 122.9 98 65.3
C09p02540 Brassica napus HOM05D003686 ORTHO05D004322 5.1e-26 122.1 191 57.6
SGA_v2.0_scaffold89G27564 Striga asiatica HOM05D003686 ORTHO05D004322 2.8e-24 116.3 123 56.1
Psat3g182400 Pisum sativum HOM05D003686 ORTHO05D004322 6.2e-24 115.2 74 71.6
Lj3A810T51 Lonicera japonica HOM05D003686 ORTHO05D004322 1.8e-23 113.6 98 67.3
Psat0s3642g0040 Pisum sativum HOM05D000068 ORTHO05D025728 1.2e-22 110.9 74 71.6
HPP92_021468 Vanilla planifolia HOM05D003686 ORTHO05D004322 1.2e-22 110.9 56 91.1
Hund24902 Selenicereus undatus HOM05D003686 ORTHO05D004322 2.0e-22 110.2 98 64.3
unitig_22.g6331 Utricularia gibba HOM05D003686 ORTHO05D004322 3.4e-22 109.4 118 54.2
vmacro02511 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 3.4e-22 109.4 94 66.0
Peaxi162Scf00936g00218 Petunia axillaris HOM05D003686 ORTHO05D004322 9.9e-22 107.8 106 58.5
Duzib211G0369 Durio zibethinus HOM05D003686 ORTHO05D004322 3.2e-20 102.8 85 67.1
Peaxi162Scf01067g00002 Petunia axillaris HOM05D003686 ORTHO05D004322 8.7e-18 94.7 91 60.4
vmacro14959 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 6.2e-16 88.6 214 35.0
QL07p015856 Quercus lobata HOM05D003686 ORTHO05D004322 1.8e-15 87.0 69 66.7
QL93p0358_0018 Quercus lobata HOM05D003686 ORTHO05D004322 1.8e-15 87.0 69 66.7
Cre09.g401300 Chlamydomonas reinhardtii HOM05D003686 ORTHO05D004322 7.6e-14 81.6 41 82.9
vmacro14957 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 4.9e-13 79.0 183 45.4
Lj5g0025755 Lotus japonicus HOM05D003686 ORTHO05D009933 6.0e-11 72.0 60 63.3
PRCOL_00005459 Prasinoderma coloniale HOM05D003686 ORTHO05D004322 8.1e-08 61.6 41 65.9
PSO384G1636 Papaver somniferum HOM05D000185 ORTHO05D000105 1.1e-07 61.2 88 48.9
PSO384G1563 Papaver somniferum HOM05D003686 ORTHO05D004322 1.4e-07 60.8 88 48.9
PSO384G1591 Papaver somniferum HOM05D000185 ORTHO05D000105 1.4e-07 60.8 88 48.9
PSO384G1681 Papaver somniferum HOM05D003686 ORTHO05D004322 1.4e-07 60.8 88 48.9


User provided reference genes

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