Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c7_13640 Physcomitrium patens HOM05D006329 ORTHO05D008357 2.9e-252 874.8 445 100.0
Mapoly0002s0007 Marchantia polymorpha HOM05D006329 ORTHO05D008357 2.2e-103 380.2 278 70.1
CDE03G0204 Ceratophyllum demersum HOM05D006329 ORTHO05D008357 3.3e-91 339.7 332 54.5
ATR0219G015 Amborella trichopoda HOM05D006329 ORTHO05D008357 5.7e-91 339.0 305 58.4
Gohir.D10G211400 Gossypium hirsutum HOM05D006329 ORTHO05D008357 7.4e-91 338.6 292 60.3
Gorai.011G237100 Gossypium raimondii HOM05D006329 ORTHO05D008357 7.4e-91 338.6 292 60.3
Gohir.A10G203300 Gossypium hirsutum HOM05D006329 ORTHO05D008357 1.6e-90 337.4 292 59.9
Cc02_g10940 Coffea canephora HOM05D006329 ORTHO05D008357 2.8e-90 336.7 348 52.9
Potri.008G035500 Populus trichocarpa HOM05D006329 ORTHO05D008357 3.7e-90 336.3 366 50.3
EL10Ac6g14260 Beta vulgaris HOM05D006329 ORTHO05D008357 4.8e-90 335.9 325 54.5
Nn6g35280 Nelumbo nucifera HOM05D006329 ORTHO05D008357 6.2e-90 335.5 266 62.0
Ah.02g128110 Amaranthus hybridus HOM05D006329 ORTHO05D008357 2.4e-89 333.6 277 60.6
Sabra08G0023700 Salix brachista HOM05D006329 ORTHO05D008357 2.4e-89 333.6 304 56.9
MBI18_g02633_MAGBIO Magnolia biondii HOM05D006329 ORTHO05D008357 5.3e-89 332.4 296 56.4
Prupe.2G208900 Prunus persica HOM05D006329 ORTHO05D008357 1.5e-88 330.9 292 58.9
SalBow6G7241 Salvia bowleyana HOM05D006329 ORTHO05D008357 1.5e-88 330.9 297 58.6
THA.LOC104824234 Tarenaya hassleriana HOM05D006329 ORTHO05D008357 1.5e-88 330.9 254 65.7
Thecc.10G083200 Theobroma cacao HOM05D006329 ORTHO05D008357 1.5e-88 330.9 307 56.7
GSVIVG01016221001 Vitis vinifera HOM05D006329 ORTHO05D008357 2.0e-88 330.5 254 63.4
COL.COLO4_17136 Corchorus olitorius HOM05D006329 ORTHO05D008357 2.6e-88 330.1 307 57.0
Ciclev10031516m.g Citrus clementina HOM05D006329 ORTHO05D008357 3.4e-88 329.7 265 62.3
Atru.chr12.838 Acer truncatum HOM05D003507 ORTHO05D008357 5.8e-88 328.9 295 58.3
SMO329G0071 Selaginella moellendorffii HOM05D006329 ORTHO05D008357 5.8e-88 328.9 251 65.3
MELO3C019822.2 Cucumis melo HOM05D006329 ORTHO05D008357 1.0e-87 328.2 296 56.8
CsaV3_6G036680 Cucumis sativus L. HOM05D006329 ORTHO05D008357 1.0e-87 328.2 296 56.4
Ca_10544_v3 Cicer arietinum L. HOM05D006329 ORTHO05D008357 1.3e-87 327.8 289 58.5
Migut.F01702 Erythranthe guttata HOM05D006329 ORTHO05D008357 1.3e-87 327.8 294 56.5
MD07G1170000 Malus domestica HOM05D006329 ORTHO05D008357 3.8e-87 326.2 381 50.1
Sed0004104 Sechium edule HOM05D006329 ORTHO05D008357 5.0e-87 325.9 292 58.2
AT2G39140 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 6.5e-87 325.5 266 60.9
CARHR133910 Cardamine hirsuta HOM05D006329 ORTHO05D008357 6.5e-87 325.5 270 60.4
Sp4g21490 Schrenkiella parvula HOM05D006329 ORTHO05D008357 6.5e-87 325.5 270 60.4
Nitab4.5_0001659g0150 Nicotiana tabacum HOM05D006329 ORTHO05D008357 8.4e-87 325.1 289 57.1
QL08p054383 Quercus lobata HOM05D006329 ORTHO05D008357 8.4e-87 325.1 274 60.6
RcHm_v2.0_Chr1g0362601 Rosa chinensis HOM05D006329 ORTHO05D008357 8.4e-87 325.1 282 60.6
Duzib114G0755 Durio zibethinus HOM05D006329 ORTHO05D008357 1.4e-86 324.3 309 54.7
Psat6g180040 Pisum sativum HOM05D006329 ORTHO05D008357 1.4e-86 324.3 289 56.7
Actinidia34805 Actinidia chinensis HOM05D006329 ORTHO05D008357 1.9e-86 323.9 290 56.6
BcaB02g09141 Brassica carinata HOM05D006329 ORTHO05D008357 1.9e-86 323.9 266 60.5
Eucgr.G02867 Eucalyptus grandis HOM05D006329 ORTHO05D008357 2.5e-86 323.6 254 63.4
PGSC0003DMG400007434 Solanum tuberosum HOM05D006329 ORTHO05D008357 2.5e-86 323.6 295 56.3
FAN10G3782 Fragaria x ananassa HOM05D006329 ORTHO05D008357 3.2e-86 323.2 255 64.3
QL08p054507 Quercus lobata HOM05D006329 ORTHO05D008357 3.2e-86 323.2 274 60.6
FvH4_7g18810 Fragaria vesca HOM05D006329 ORTHO05D008357 4.2e-86 322.8 255 63.9
FAN03G2323 Fragaria x ananassa HOM05D003507 ORTHO05D004324 4.2e-86 322.8 255 63.9
Thhalv10016747m.g Eutrema salsugineum HOM05D006329 ORTHO05D008357 5.5e-86 322.4 270 60.0
AL4G36440 Arabidopsis lyrata HOM05D006329 ORTHO05D008357 7.1e-86 322.0 266 60.5
HanXRQChr14g0456591 Helianthus annuus HOM05D006329 ORTHO05D008357 7.1e-86 322.0 286 57.3
Manes.05G201000 Manihot esculenta HOM05D006329 ORTHO05D008357 9.3e-86 321.6 341 51.9
PSO063G6532 Papaver somniferum HOM05D006329 ORTHO05D008357 9.3e-86 321.6 283 57.2
Solyc11g008360.3 Solanum lycopersicum HOM05D006329 ORTHO05D008357 9.3e-86 321.6 295 56.3
Nitab4.5_0001450g0040 Nicotiana tabacum HOM05D006329 ORTHO05D008357 1.2e-85 321.2 289 56.4
TPR.G10288 Trifolium pratense HOM05D006329 ORTHO05D008357 1.2e-85 321.2 290 57.9
Carub.0004s2119 Capsella rubella HOM05D006329 ORTHO05D008357 1.6e-85 320.9 268 60.1
ClCG08G007690 Citrullus lanatus HOM05D006329 ORTHO05D008357 1.6e-85 320.9 280 59.3
Lsat_1_v5_gn_2_113040 Lactuca sativa HOM05D006329 ORTHO05D008357 1.6e-85 320.9 283 59.0
PSO339G5012 Papaver somniferum HOM05D006329 ORTHO05D008357 2.1e-85 320.5 268 59.3
FAN06G3910 Fragaria x ananassa HOM05D006329 ORTHO05D008357 3.5e-85 319.7 255 63.5
PGR142G3823 Punica granatum HOM05D006329 ORTHO05D008357 3.5e-85 319.7 262 63.0
Medtr1g094190 Medicago truncatula HOM05D006329 ORTHO05D008357 4.6e-85 319.3 290 57.9
Rhsim09G0148200 Rhododendron simsii HOM05D000461 ORTHO05D001829 7.9e-85 318.5 274 58.8
MSTRG.389 Avicennia marina HOM05D006329 ORTHO05D008357 1.0e-84 318.2 270 58.9
Cfa001679 Carpinus fangiana HOM05D006329 ORTHO05D008357 1.0e-84 318.2 246 62.2
CiPaw.01G268700 Carya illinoinensis HOM05D006329 ORTHO05D008357 1.0e-84 318.2 263 60.5
Hma1.2p1_2894F.1_g329960 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 1.0e-84 318.2 266 59.8
Oeu013841.1 Olea europaea HOM05D006329 ORTHO05D008357 1.0e-84 318.2 326 52.1
Sopen11g004170 Solanum pennellii HOM05D006329 ORTHO05D008357 1.0e-84 318.2 295 55.9
Aqoxy1G01144 Aquilegia oxysepala HOM05D006329 ORTHO05D008357 1.3e-84 317.8 312 53.8
TAR623G1379 Trochodendron aralioides HOM05D006329 ORTHO05D008357 1.3e-84 317.8 266 60.2
CANSAT56G2601 Cannabis sativa HOM05D006329 ORTHO05D008357 1.8e-84 317.4 282 57.1
CAN.G321.64 Capsicum annuum HOM05D006329 ORTHO05D008357 1.8e-84 317.4 246 63.4
Lj5g0015116 Lotus japonicus HOM05D006329 ORTHO05D008357 1.8e-84 317.4 266 59.8
Phvul.007G098900 Phaseolus vulgaris HOM05D006329 ORTHO05D008357 1.8e-84 317.4 291 56.7
HPP92_027741 Vanilla planifolia HOM05D006329 ORTHO05D008357 5.1e-84 315.8 296 56.1
Glyma.10G207800 Glycine max HOM05D006329 ORTHO05D008357 8.7e-84 315.1 272 59.6
SGA_v2.0_scaffold51G18714 Striga asiatica HOM05D006329 ORTHO05D008357 8.7e-84 315.1 274 59.1
FAN10G0068 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.9e-83 313.9 255 62.7
Haze_16856 Corylus avellana HOM05D006329 ORTHO05D008357 4.8e-82 309.3 276 56.5
EL10Ac4g09587 Beta vulgaris HOM05D006329 ORTHO05D008357 6.3e-82 308.9 301 55.1
Lalb_Chr21g0313671 Lupinus albus HOM05D006329 ORTHO05D008357 6.3e-82 308.9 279 56.3
arahy.Tifrunner.gnm1.ann1.KFTR8M Arachis hypogaea HOM05D006329 ORTHO05D008357 1.1e-81 308.1 336 51.8
A05p07160 Brassica napus HOM05D006329 ORTHO05D008357 3.1e-81 306.6 255 60.0
BraA05t19681Z Brassica rapa HOM05D006329 ORTHO05D008357 4.1e-81 306.2 255 60.0
BcaC02g12042 Brassica carinata HOM05D006329 ORTHO05D008357 6.9e-81 305.4 255 59.6
C04p08570 Brassica napus HOM05D006329 ORTHO05D008357 6.9e-81 305.4 255 59.6
BolC4t22452H Brassica oleracea HOM05D006329 ORTHO05D008357 6.9e-81 305.4 255 59.6
HPP92_026018 Vanilla planifolia HOM05D006329 ORTHO05D008357 2.6e-80 303.5 296 55.7
Cpa.g.sc53.128 Carica papaya HOM05D006329 ORTHO05D008357 5.9e-80 302.4 265 58.1
ECA238G1295 Erigeron canadensis HOM05D006329 ORTHO05D001676 1.0e-79 301.6 296 54.1
DCAR_005490 Daucus carota HOM05D006329 ORTHO05D008357 1.7e-79 300.8 309 52.8
AUR62002759 Chenopodium quinoa HOM05D006329 ORTHO05D008357 8.5e-79 298.5 236 65.3
Zm00001eb004240 Zea mays HOM05D006329 ORTHO05D008357 1.4e-78 297.7 267 56.9
Peaxi162Scf00145g01311 Petunia axillaris HOM05D006329 ORTHO05D008357 3.2e-78 296.6 255 59.2
FAN06G0494 Fragaria x ananassa HOM05D006329 ORTHO05D008357 5.1e-76 289.3 263 58.6
RhsimUnG0185600 Rhododendron simsii HOM05D000461 ORTHO05D001829 1.1e-75 288.1 235 60.4
vmacro04842 Vaccinium macrocarpon HOM05D006329 ORTHO05D008357 1.2e-72 278.1 229 59.4
arahy.Tifrunner.gnm1.ann1.21BGD2 Arachis hypogaea HOM05D006329 ORTHO05D008357 1.5e-72 277.7 285 54.0
Os03g0152700 Oryza sativa ssp. japonica HOM05D006329 ORTHO05D008357 1.5e-72 277.7 256 57.4
Hund20700 Selenicereus undatus HOM05D006329 ORTHO05D008357 5.9e-72 275.8 343 46.9
VMungo0251G3605 Vigna mungo HOM05D006329 ORTHO05D008357 6.1e-69 265.8 272 52.6
Dinv31231 Davidia involucrata HOM05D006329 ORTHO05D008357 5.1e-68 262.7 195 63.6
Lj3A938T44 Lonicera japonica HOM05D006329 ORTHO05D008357 9.7e-67 258.5 326 45.7
Lalb_Chr21g0313541 Lupinus albus HOM05D006329 ORTHO05D008357 4.1e-65 253.1 209 58.9
Cfa001678 Carpinus fangiana HOM05D006329 ORTHO05D008357 1.5e-59 234.6 163 65.6
CSS0005771 Camellia sinensis var. sinensis HOM05D006329 ORTHO05D008357 2.6e-59 233.8 315 44.1
Sc09g0006060 Simmondsia chinensis HOM05D006329 ORTHO05D008357 7.4e-59 232.3 208 56.7
FAN01G2166 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.2e-56 224.9 192 60.4
Aa31LG5G20460 Aethionema arabicum HOM05D006329 ORTHO05D008357 4.2e-54 216.5 238 50.4
MCO14G528 Micromonas commoda HOM05D006329 ORTHO05D008357 9.4e-54 215.3 252 48.0
CBR_g29624 Chara braunii HOM05D006329 ORTHO05D008357 8.0e-53 212.2 170 61.8
HPP92_026744 Vanilla planifolia HOM05D006329 ORTHO05D008357 2.6e-51 207.2 237 50.2
PRCOL_00004574 Prasinoderma coloniale HOM05D006329 ORTHO05D008357 1.2e-45 188.3 241 46.1
Cre02.g095121 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 1.4e-44 184.9 327 38.2
AUR62014125 Chenopodium quinoa HOM05D006329 ORTHO05D008357 2.9e-34 150.6 115 63.5
Pp3s196_90 Physcomitrium patens HOM05D006329 ORTHO05D008357 1.2e-27 128.6 249 31.7
CAN.G176.13 Capsicum annuum HOM05D006329 ORTHO05D033978 9.5e-22 109.0 118 47.5
Cre07.g323550 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 6.4e-18 96.3 255 31.4
MCO04G216 Micromonas commoda HOM05D006329 ORTHO05D008357 1.3e-15 88.6 260 28.1
MCO01G641 Micromonas commoda HOM05D006329 ORTHO05D008357 1.2e-13 82.0 262 27.5
Hma1.2p1_2894F.1_g329970 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 2.8e-13 80.9 78 56.4
AT3G43340 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 1.8e-12 78.2 71 59.2
Glyma.20G182966 Glycine max HOM05D006329 ORTHO05D028485 5.6e-06 56.6 81 46.9


User provided reference genes

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