Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c3_2280 Physcomitrium patens HOM05D003850 ORTHO05D004515 2.4e-269 931.8 542 100.0
QL05p069776 Quercus lobata HOM05D003850 ORTHO05D004515 1.7e-121 440.7 555 55.0
Mapoly0105s0015 Marchantia polymorpha HOM05D003850 ORTHO05D004515 8.3e-121 438.3 558 55.7
TAR624G0821 Trochodendron aralioides HOM05D003850 ORTHO05D004515 1.7e-118 430.6 555 53.7
Nn1g03331 Nelumbo nucifera HOM05D003850 ORTHO05D004515 4.3e-117 426.0 557 52.8
CANSAT56G0590 Cannabis sativa HOM05D003850 ORTHO05D004515 6.2e-116 422.2 554 51.4
TAR629G2665 Trochodendron aralioides HOM05D003850 ORTHO05D004515 1.7e-113 414.1 555 53.3
Ciclev10014841m.g Citrus clementina HOM05D003850 ORTHO05D004515 1.9e-112 410.6 559 52.1
Aqoxy1G04110 Aquilegia oxysepala HOM05D003850 ORTHO05D004515 7.1e-112 408.7 556 50.5
CSS0032808 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 1.2e-111 407.9 558 49.6
CSS0007684 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 1.3e-110 404.4 557 50.8
Eucgr.E03951 Eucalyptus grandis HOM05D003850 ORTHO05D004515 1.3e-110 404.4 562 54.8
Duzib160G0220 Durio zibethinus HOM05D003850 ORTHO05D004515 1.1e-109 401.4 592 47.6
CiPaw.09G102000 Carya illinoinensis HOM05D003850 ORTHO05D004515 2.5e-109 400.2 558 53.2
GSVIVG01003352001 Vitis vinifera HOM05D003850 ORTHO05D004515 4.3e-109 399.4 557 53.5
Atru.chr1.2461 Acer truncatum HOM05D003850 ORTHO05D004515 5.6e-109 399.1 555 51.7
Nn1g07354 Nelumbo nucifera HOM05D003850 ORTHO05D004515 9.6e-109 398.3 549 52.6
SEGI_18521 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 9.6e-109 398.3 567 52.0
Potri.006G009100 Populus trichocarpa HOM05D003850 ORTHO05D004515 1.6e-108 397.5 558 52.0
Ca_00718_v3 Cicer arietinum L. HOM05D003850 ORTHO05D004515 1.8e-107 394.0 556 49.1
Phvul.006G143600 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 3.1e-107 393.3 559 48.3
VMungo1215G3075 Vigna mungo HOM05D003850 ORTHO05D004515 1.2e-106 391.3 553 52.3
HPP92_001629 Vanilla planifolia HOM05D003850 ORTHO05D004515 2.0e-106 390.6 553 47.7
MSTRG.7170 Avicennia marina HOM05D003850 ORTHO05D004515 1.3e-105 387.9 560 51.1
Manes.07G088900 Manihot esculenta HOM05D003850 ORTHO05D004515 2.9e-105 386.7 550 50.4
Lalb_Chr20g0119201 Lupinus albus HOM05D003850 ORTHO05D004515 3.2e-104 383.3 556 49.1
Thecc.06G232700 Theobroma cacao HOM05D003850 ORTHO05D004515 7.1e-104 382.1 569 48.7
Glyma.09G009900 Glycine max HOM05D003850 ORTHO05D004515 9.3e-104 381.7 565 47.8
PSO210G4264 Papaver somniferum HOM05D003850 ORTHO05D004515 9.3e-104 381.7 555 49.4
MBI16_g42266_MAGBIO Magnolia biondii HOM05D003850 ORTHO05D004515 1.2e-103 381.3 553 50.6
ATR0751G086 Amborella trichopoda HOM05D003850 ORTHO05D004515 1.6e-103 380.9 563 49.6
Migut.M01390 Erythranthe guttata HOM05D003850 ORTHO05D004515 1.6e-103 380.9 552 48.7
arahy.Tifrunner.gnm1.ann1.C17RPB Arachis hypogaea HOM05D003850 ORTHO05D004515 4.6e-103 379.4 558 48.6
Potri.016G015100 Populus trichocarpa HOM05D003850 ORTHO05D004515 1.0e-102 378.3 556 50.9
Sopen11g006940 Solanum pennellii HOM05D003850 ORTHO05D004515 6.6e-102 375.6 553 50.1
Prupe.4G011300 Prunus persica HOM05D003850 ORTHO05D004515 1.1e-101 374.8 557 49.2
PGR102G0753 Punica granatum HOM05D003850 ORTHO05D004515 1.5e-101 374.4 557 52.1
VMungo0540G1287 Vigna mungo HOM05D003850 ORTHO05D004515 3.3e-101 373.2 554 48.4
RhsimUnG0025700 Rhododendron simsii HOM05D003850 ORTHO05D004515 5.6e-101 372.5 593 51.4
RhsimUnG0028500 Rhododendron simsii HOM05D003850 ORTHO05D004515 5.6e-101 372.5 593 51.4
arahy.Tifrunner.gnm1.ann1.IIR6TV Arachis hypogaea HOM05D003850 ORTHO05D004515 9.6e-101 371.7 558 48.2
TPR.G3343 Trifolium pratense HOM05D003850 ORTHO05D004515 9.6e-101 371.7 573 51.8
SalBow8G5272 Salvia bowleyana HOM05D003850 ORTHO05D004515 1.3e-100 371.3 567 50.4
Gohir.A06G153120 Gossypium hirsutum HOM05D003850 ORTHO05D004515 2.8e-100 370.2 571 50.1
Gorai.010G186300 Gossypium raimondii HOM05D003850 ORTHO05D004515 2.8e-100 370.2 570 49.8
Sed0003006 Sechium edule HOM05D003850 ORTHO05D004515 1.1e-99 368.2 582 45.2
Phvul.003G083500 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 1.4e-99 367.9 558 50.4
Cc09_g00920 Coffea canephora HOM05D003850 ORTHO05D004515 2.4e-99 367.1 558 51.6
Nitab4.5_0001198g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 5.3e-99 365.9 542 50.4
MD05G1357300 Malus domestica HOM05D003850 ORTHO05D004515 6.9e-99 365.5 565 49.6
Gohir.D06G159600 Gossypium hirsutum HOM05D003850 ORTHO05D004515 1.2e-98 364.8 570 49.5
Medtr2g025590 Medicago truncatula HOM05D003850 ORTHO05D004515 1.2e-98 364.8 552 51.4
THA.LOC104812992 Tarenaya hassleriana HOM05D003850 ORTHO05D004515 2.0e-98 364.0 563 48.1
CsaV3_3G028740 Cucumis sativus L. HOM05D003850 ORTHO05D004515 1.4e-96 357.8 571 45.5
Glyma.15G114200 Glycine max HOM05D003850 ORTHO05D004515 5.4e-96 355.9 552 46.7
Actinidia39269 Actinidia chinensis HOM05D003850 ORTHO05D004515 7.1e-96 355.5 362 60.8
Sabra06G0006900 Salix brachista HOM05D003850 ORTHO05D004515 4.6e-95 352.8 558 48.7
Oeu002760.2 Olea europaea HOM05D003850 ORTHO05D004515 7.9e-95 352.1 585 47.2
vmacro15772 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 1.8e-94 350.9 568 50.2
AUR62021872 Chenopodium quinoa HOM05D003850 ORTHO05D004515 2.3e-94 350.5 576 43.4
arahy.Tifrunner.gnm1.ann1.97WSNQ Arachis hypogaea HOM05D003850 ORTHO05D004515 5.1e-94 349.4 563 46.5
PSO302G0165 Papaver somniferum HOM05D003850 ORTHO05D004515 1.1e-93 348.2 559 46.5
Nitab4.5_0000143g0310 Nicotiana tabacum HOM05D003850 ORTHO05D004515 7.4e-93 345.5 543 49.2
COL.COLO4_31876 Corchorus olitorius HOM05D003850 ORTHO05D004515 6.2e-92 342.4 564 45.6
arahy.Tifrunner.gnm1.ann1.0C9QHL Arachis hypogaea HOM05D003850 ORTHO05D004515 8.1e-92 342.0 565 48.5
Sabra16G0017100 Salix brachista HOM05D003850 ORTHO05D004515 3.1e-91 340.1 589 44.0
AT4G12610 Arabidopsis thaliana HOM05D003850 ORTHO05D004515 9.0e-91 338.6 561 49.7
ECA233G3046 Erigeron canadensis HOM05D003850 ORTHO05D004515 9.0e-91 338.6 565 48.0
FAN25G3770 Fragaria x ananassa HOM05D003850 ORTHO05D004515 2.0e-90 337.4 593 42.5
AL6G47570 Arabidopsis lyrata HOM05D003850 ORTHO05D004515 7.6e-90 335.5 560 50.4
TWI63G0294 Tripterygium wilfordii HOM05D003850 ORTHO05D004515 1.7e-89 334.3 528 49.6
Cfa000110 Carpinus fangiana HOM05D003850 ORTHO05D004515 2.9e-89 333.6 556 48.4
ClCG07G001740 Citrullus lanatus HOM05D003850 ORTHO05D004515 3.8e-89 333.2 554 45.8
FvH4_3g01042 Fragaria vesca HOM05D003850 ORTHO05D004515 3.8e-89 333.2 561 43.1
SGA_v2.0_scaffold4G01878 Striga asiatica HOM05D003850 ORTHO05D004515 4.9e-89 332.8 528 48.5
Aa31LG9G10040 Aethionema arabicum HOM05D003850 ORTHO05D004515 1.1e-88 331.6 576 49.1
MD10G1331000 Malus domestica HOM05D003850 ORTHO05D004515 1.4e-88 331.3 531 50.7
PSO339G3925 Papaver somniferum HOM05D003850 ORTHO05D004515 1.4e-88 331.3 562 47.0
Haze_08659 Corylus avellana HOM05D003850 ORTHO05D004515 3.2e-88 330.1 597 44.2
Sabra16G0000900 Salix brachista HOM05D003850 ORTHO05D004515 3.2e-88 330.1 556 41.4
BolC9t56221H Brassica oleracea HOM05D003850 ORTHO05D004515 1.2e-87 328.2 548 48.0
CiPaw.10G077600 Carya illinoinensis HOM05D003850 ORTHO05D004515 2.1e-87 327.4 510 46.5
BraA09t38246Z Brassica rapa HOM05D003850 ORTHO05D004515 6.0e-87 325.9 544 47.4
Solyc11g012150.3 Solanum lycopersicum HOM05D003850 ORTHO05D004515 2.3e-86 323.9 526 48.3
PGSC0003DMG400013344 Solanum tuberosum HOM05D003850 ORTHO05D004515 2.3e-86 323.9 519 49.1
A03p29830 Brassica napus HOM05D003850 ORTHO05D004515 2.8e-84 317.0 557 48.7
Lj4g0025543 Lotus japonicus HOM05D003850 ORTHO05D004515 2.8e-84 317.0 552 46.0
Lj6g0013016 Lotus japonicus HOM05D003850 ORTHO05D004515 2.8e-84 317.0 559 46.2
BraA03t12173Z Brassica rapa HOM05D003850 ORTHO05D004515 3.7e-84 316.6 558 48.6
C03p36090 Brassica napus HOM05D003850 ORTHO05D004515 4.8e-84 316.2 562 48.6
Oeu044421.3 Olea europaea HOM05D003850 ORTHO05D004515 4.8e-84 316.2 314 57.3
BcaC01g04577 Brassica carinata HOM05D003850 ORTHO05D004515 1.1e-83 315.1 563 48.5
BolC3t15918H Brassica oleracea HOM05D003850 ORTHO05D004515 1.1e-83 315.1 563 48.5
Cpa.g.sc75.120 Carica papaya HOM05D003850 ORTHO05D004515 1.8e-83 314.3 557 48.7
Peaxi162Scf00558g00516 Petunia axillaris HOM05D003850 ORTHO05D004515 2.4e-83 313.9 504 51.0
BcaB01g01757 Brassica carinata HOM05D003850 ORTHO05D004515 5.3e-83 312.8 546 46.9
vmacro03646 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 1.5e-82 311.2 570 43.0
FAN21G1422 Fragaria x ananassa HOM05D003850 ORTHO05D004515 4.5e-82 309.7 579 41.3
unitig_748.g7103 Utricularia gibba HOM05D003850 ORTHO05D004515 1.0e-81 308.5 547 42.6
RcHm_v2.0_Chr5g0001581 Rosa chinensis HOM05D003850 ORTHO05D004515 1.7e-81 307.8 566 42.9
A09p26740 Brassica napus HOM05D003850 ORTHO05D004515 2.9e-81 307.0 540 45.4
Carub.0006s3188 Capsella rubella HOM05D003850 ORTHO05D004515 3.8e-81 306.6 562 47.2
Hund23984 Selenicereus undatus HOM05D003850 ORTHO05D004515 1.9e-80 304.3 559 48.1
AagrBONN_evm.TU.Sc2ySwM_228.4136 Anthoceros agrestis HOM05D003850 ORTHO05D004515 3.2e-80 303.5 372 54.6
BcaB01g02623 Brassica carinata HOM05D003850 ORTHO05D004515 3.2e-80 303.5 544 46.9
CARHR253560 Cardamine hirsuta HOM05D003850 ORTHO05D004515 3.2e-80 303.5 556 48.0
CAN.G1186.28 Capsicum annuum HOM05D003850 ORTHO05D004515 4.6e-79 299.7 555 45.2
HanXRQChr15g0470091 Helianthus annuus HOM05D003850 ORTHO05D004515 3.0e-78 297.0 540 47.6
Zm00001eb224360 Zea mays HOM05D003850 ORTHO05D004515 1.1e-77 295.0 501 46.3
Lj2A262G45 Lonicera japonica HOM05D003850 ORTHO05D004515 1.9e-77 294.3 523 45.9
CDE06G1774 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 1.3e-76 291.6 319 53.6
Sp6g04900 Schrenkiella parvula HOM05D003850 ORTHO05D004515 1.1e-75 288.5 559 47.4
Thhalv10028564m.g Eutrema salsugineum HOM05D003850 ORTHO05D004515 1.4e-75 288.1 558 47.0
SHI24464 Sapria himalayana HOM05D003850 ORTHO05D004515 1.4e-75 288.1 554 39.9
RhsimUnG0109100 Rhododendron simsii HOM05D003850 ORTHO05D004515 2.4e-75 287.3 545 40.2
BcaC04g21251 Brassica carinata HOM05D003850 ORTHO05D004515 3.1e-75 287.0 540 45.0
C09p33830 Brassica napus HOM05D003850 ORTHO05D004515 3.1e-75 287.0 540 45.0
RcHm_v2.0_Chr5g0007791 Rosa chinensis HOM05D003850 ORTHO05D004515 3.4e-74 283.5 554 43.0
Zm00001eb398520 Zea mays HOM05D003850 ORTHO05D004515 6.5e-73 279.3 550 38.0
Lj8A171G42 Lonicera japonica HOM05D003850 ORTHO05D004515 8.5e-73 278.9 548 38.1
CDE04G2591 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 4.6e-71 273.1 541 41.8
EL10Ac8g20176 Beta vulgaris HOM05D003850 ORTHO05D004515 3.9e-70 270.0 553 46.5
Lsat_1_v5_gn_7_13561 Lactuca sativa HOM05D003850 ORTHO05D004515 4.3e-69 266.5 514 47.3
Psat1g176560 Pisum sativum HOM05D003850 ORTHO05D004515 1.6e-68 264.6 479 49.7
Rhsim13G0146600 Rhododendron simsii HOM05D003850 ORTHO05D004515 8.2e-68 262.3 599 36.6
FAN11G3915 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.8e-67 261.2 547 38.2
FvH4_3g04782 Fragaria vesca HOM05D003850 ORTHO05D004515 1.5e-66 258.1 547 38.4
FAN16G3024 Fragaria x ananassa HOM05D003850 ORTHO05D004515 2.6e-66 257.3 547 38.0
FAN21G1676 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.0e-65 255.4 539 38.2
FAN03G2951 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.7e-65 254.6 539 38.2
TPR.G34491 Trifolium pratense HOM05D003850 ORTHO05D004515 4.6e-63 246.5 192 62.5
MELO3C012788.2 Cucumis melo HOM05D003850 ORTHO05D004515 6.1e-63 246.1 480 44.2
FvH4_2g22070 Fragaria vesca HOM05D003850 ORTHO05D004515 5.1e-62 243.0 549 37.2
FAN24G0125 Fragaria x ananassa HOM05D003850 ORTHO05D008045 1.4e-59 235.0 549 37.0
SEGI_38016 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 1.2e-55 221.9 303 45.5
Duzib235G1223 Durio zibethinus HOM05D003850 ORTHO05D004515 2.6e-53 214.2 425 45.9
AUR62012783 Chenopodium quinoa HOM05D003850 ORTHO05D004515 2.4e-51 207.6 459 39.0
Medtr2g025620 Medicago truncatula HOM05D003850 ORTHO05D004515 3.5e-50 203.8 533 40.9
DCAR_025996 Daucus carota HOM05D003850 ORTHO05D004515 2.2e-49 201.1 459 42.9
QL09p006300 Quercus lobata HOM05D003850 ORTHO05D004515 5.0e-49 199.9 379 49.1
Peaxi162Scf00015g02110 Petunia axillaris HOM05D003850 ORTHO05D004515 9.4e-48 195.7 304 49.0
Dinv07398 Davidia involucrata HOM05D003850 ORTHO05D004515 2.1e-39 167.9 349 48.4
CBR_g38333 Chara braunii HOM05D000019 ORTHO05D000002 2.2e-36 157.9 252 46.4
HPP92_001646 Vanilla planifolia HOM05D003850 ORTHO05D004515 3.7e-36 157.1 256 46.5
TPR.G13041 Trifolium pratense HOM05D003850 ORTHO05D004515 4.1e-35 153.7 375 46.7
Sc17g0007710 Simmondsia chinensis HOM05D003850 ORTHO05D004515 3.5e-34 150.6 384 47.4
FAN25G2646 Fragaria x ananassa HOM05D003850 ORTHO05D004515 3.0e-30 137.5 507 31.2
Actinidia11880 Actinidia chinensis HOM05D003850 ORTHO05D004515 2.0e-26 124.8 318 38.7
HPP92_001645 Vanilla planifolia HOM05D003850 ORTHO05D004515 5.9e-26 123.2 97 57.7
AagrBONN_evm.TU.Sc2ySwM_228.3786 Anthoceros agrestis HOM05D003850 ORTHO05D004515 5.7e-21 106.7 133 43.6
Gorai.002G145900 Gossypium raimondii HOM05D003850 ORTHO05D004515 3.0e-17 94.4 184 57.6
Lsat_1_v5_gn_5_64561 Lactuca sativa HOM05D003952 ORTHO05D004515 6.6e-17 93.2 161 47.8
AagrBONN_evm.TU.Sc2ySwM_228.3787 Anthoceros agrestis HOM05D003850 ORTHO05D004515 8.0e-15 86.3 259 38.2
PSO339G5270 Papaver somniferum HOM05D003850 ORTHO05D004515 5.8e-13 80.1 55 60.0
Gohir.D01G119450 Gossypium hirsutum HOM05D003850 ORTHO05D004515 7.5e-13 79.7 111 56.8
Eucgr.A01650 Eucalyptus grandis HOM05D002251 ORTHO05D004515 2.2e-12 78.2 54 63.0
TAR629G2548 Trochodendron aralioides HOM05D003850 ORTHO05D004515 3.7e-12 77.4 301 26.6
Lsat_1_v5_gn_3_78300 Lactuca sativa HOM05D002115 ORTHO05D002263 1.6e-10 72.0 40 82.5
PSO384G4333 Papaver somniferum HOM05D003850 ORTHO05D004515 3.9e-09 67.4 213 34.7
HPP92_001647 Vanilla planifolia HOM05D003850 ORTHO05D004515 1.9e-08 65.1 91 45.1
RcHm_v2.0_Chr6g0288941 Rosa chinensis HOM05D003850 ORTHO05D004515 5.6e-08 63.5 265 29.8
SEGI_29277 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 9.5e-08 62.8 218 34.4
VMungo0720G0179 Vigna mungo HOM05D003850 ORTHO05D004515 2.8e-07 61.2 52 50.0
CBR_g38329 Chara braunii HOM05D003850 ORTHO05D004515 4.7e-07 60.5 114 38.6
FAN21G0780 Fragaria x ananassa HOM05D003850 ORTHO05D004515 8.1e-07 59.7 214 35.0
Nitab4.5_0013082g0020 Nicotiana tabacum HOM05D003850 ORTHO05D004515 3.1e-06 57.8 74 45.9
CAN.G1186.27 Capsicum annuum HOM05D001620 ORTHO05D005461 4.0e-06 57.4 59 50.8
CDE06G0619 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 8.9e-06 56.2 210 34.8


User provided reference genes

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