Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G031700 Populus trichocarpa HOM05D005431 ORTHO05D006762 3.7e-186 654.8 351 100.0
Potri.013G054300 Populus trichocarpa HOM05D005431 ORTHO05D006762 4.4e-147 525.0 352 82.4
Sabra13G0049000 Salix brachista HOM05D005431 ORTHO05D006762 1.7e-138 496.5 352 79.8
Manes.08G148100 Manihot esculenta HOM05D005431 ORTHO05D006762 1.5e-115 420.2 325 73.5
Thecc.05G259000 Theobroma cacao HOM05D005431 ORTHO05D006762 2.3e-111 406.4 357 66.7
Gohir.A11G240400 Gossypium hirsutum HOM05D005431 ORTHO05D006762 1.9e-110 403.3 363 66.7
QL07p020652 Quercus lobata HOM05D005431 ORTHO05D006762 1.9e-110 403.3 346 67.1
Dinv18088 Davidia involucrata HOM05D005431 ORTHO05D006762 1.2e-109 400.6 353 64.9
TAR633G0900 Trochodendron aralioides HOM05D005431 ORTHO05D006762 1.2e-109 400.6 357 65.5
Duzib128G1128 Durio zibethinus HOM05D005431 ORTHO05D006762 3.1e-108 396.0 360 65.8
Haze_19398 Corylus avellana HOM05D005431 ORTHO05D006762 2.6e-107 392.9 349 67.3
Gohir.D11G249800 Gossypium hirsutum HOM05D005431 ORTHO05D006762 3.4e-107 392.5 346 67.3
COL.COLO4_08630 Corchorus olitorius HOM05D005431 ORTHO05D006762 1.3e-106 390.6 361 64.3
Haze_21236 Corylus avellana HOM05D005431 ORTHO05D006762 2.9e-106 389.4 361 65.4
Lj1A1139T47 Lonicera japonica HOM05D005431 ORTHO05D006762 2.9e-106 389.4 346 63.6
Cfa011866 Carpinus fangiana HOM05D005431 ORTHO05D006762 1.1e-105 387.5 348 66.1
Cfa016425 Carpinus fangiana HOM05D005431 ORTHO05D006762 1.4e-105 387.1 355 65.4
Eucgr.A02076 Eucalyptus grandis HOM05D005431 ORTHO05D006762 4.6e-104 382.1 357 64.1
CiPaw.10G000400 Carya illinoinensis HOM05D005431 ORTHO05D006762 1.3e-103 380.6 338 66.9
CSS0010563 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 3.9e-103 379.0 319 69.0
Cpa.g.sc594.2 Carica papaya HOM05D005431 ORTHO05D006762 3.9e-103 379.0 348 65.5
Gorai.007G267600 Gossypium raimondii HOM05D005431 ORTHO05D006762 8.7e-103 377.9 333 67.9
GSVIVG01020933001 Vitis vinifera HOM05D005431 ORTHO05D006762 9.6e-102 374.4 316 71.5
Lalb_Chr14g0364381 Lupinus albus HOM05D005431 ORTHO05D006762 3.1e-100 369.4 338 65.1
CSS0005177 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 5.3e-100 368.6 295 71.9
Duzib177G0804 Durio zibethinus HOM05D005431 ORTHO05D006762 6.9e-100 368.2 359 62.1
TWI32G0483 Tripterygium wilfordii HOM05D005431 ORTHO05D006762 1.5e-99 367.1 339 62.8
Sc24g0002060 Simmondsia chinensis HOM05D005431 ORTHO05D006762 2.6e-99 366.3 346 63.6
Oeu051845.1 Olea europaea HOM05D005431 ORTHO05D006762 4.9e-98 362.1 322 64.9
Atru.chr2.1265 Acer truncatum HOM05D005431 ORTHO05D006762 8.4e-98 361.3 318 67.9
Lj1g0019204 Lotus japonicus HOM05D005431 ORTHO05D006762 8.4e-98 361.3 334 65.3
Prupe.6G097200 Prunus persica HOM05D005431 ORTHO05D006762 1.1e-97 360.9 318 66.4
PSO339G6142 Papaver somniferum HOM05D005431 ORTHO05D006762 2.4e-97 359.8 326 64.7
PSO384G4368 Papaver somniferum HOM05D005431 ORTHO05D006762 2.4e-97 359.8 323 66.6
TPR.G5901 Trifolium pratense HOM05D005431 ORTHO05D006762 5.4e-97 358.6 348 61.8
Glyma.16G042800 Glycine max HOM05D005431 ORTHO05D006762 7.1e-97 358.2 333 61.6
Glyma.19G109200 Glycine max HOM05D005431 ORTHO05D006762 1.6e-96 357.1 350 61.4
Rhsim06G0113900 Rhododendron simsii HOM05D005431 ORTHO05D006762 2.1e-96 356.7 385 58.7
Ciclev10020067m.g Citrus clementina HOM05D005431 ORTHO05D006762 1.7e-95 353.6 320 65.9
ECA233G5562 Erigeron canadensis HOM05D005431 ORTHO05D006762 8.7e-95 351.3 309 66.7
Aqoxy2G02389 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.9e-94 350.1 320 63.4
VMungo1383G2520 Vigna mungo HOM05D005431 ORTHO05D006762 3.3e-94 349.4 332 61.7
arahy.Tifrunner.gnm1.ann1.UBW8VJ Arachis hypogaea HOM05D005431 ORTHO05D006762 4.3e-94 349.0 315 65.1
Lsat_1_v5_gn_6_37921 Lactuca sativa HOM05D005431 ORTHO05D006762 7.3e-94 348.2 348 56.9
MBI13_g30325_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 7.3e-94 348.2 322 66.5
MD03G1112900 Malus domestica HOM05D005431 ORTHO05D006762 9.6e-94 347.8 322 64.6
Medtr7g085290 Medicago truncatula HOM05D005431 ORTHO05D006762 1.3e-93 347.4 346 61.0
PGR042G1130 Punica granatum HOM05D005431 ORTHO05D006762 1.6e-93 347.1 350 60.3
arahy.Tifrunner.gnm1.ann1.H79Q9S Arachis hypogaea HOM05D005431 ORTHO05D006762 3.6e-93 345.9 315 65.4
CANSAT78G0764 Cannabis sativa HOM05D005431 ORTHO05D006762 1.4e-92 344.0 324 65.1
Ca_08254_v3 Cicer arietinum L. HOM05D005431 ORTHO05D006762 1.8e-92 343.6 345 60.3
Aqoxy6G02574 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 2.4e-92 343.2 321 62.9
HanXRQChr02g0054501 Helianthus annuus HOM05D005431 ORTHO05D006762 2.4e-92 343.2 319 64.9
AUR62035802 Chenopodium quinoa HOM05D005431 ORTHO05D006762 3.1e-92 342.8 306 68.0
Psat3g089720 Pisum sativum HOM05D005431 ORTHO05D006762 9.0e-92 341.3 345 60.9
PGSC0003DMG400001606 Solanum tuberosum HOM05D005431 ORTHO05D006762 5.8e-91 338.6 312 62.8
Nitab4.5_0001364g0090 Nicotiana tabacum HOM05D005431 ORTHO05D006762 1.3e-90 337.4 313 64.2
Peaxi162Scf00362g01188 Petunia axillaris HOM05D005431 ORTHO05D006762 2.9e-90 336.3 313 63.3
Phvul.001G100700 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 2.9e-90 336.3 345 58.0
Solyc01g110820.4 Solanum lycopersicum HOM05D005431 ORTHO05D006762 1.4e-89 334.0 328 61.3
SalBow1G3497 Salvia bowleyana HOM05D005431 ORTHO05D006762 2.4e-89 333.2 316 63.9
FvH4_3g32950 Fragaria vesca HOM05D005431 ORTHO05D006762 7.9e-88 328.2 315 62.9
Cc10_g14020 Coffea canephora HOM05D005431 ORTHO05D006762 1.8e-87 327.0 349 57.0
HPP92_006679 Vanilla planifolia HOM05D005431 ORTHO05D006762 3.9e-87 325.9 342 59.4
FAN11G0735 Fragaria x ananassa HOM05D005431 ORTHO05D006762 3.3e-86 322.8 315 61.9
MSTRG.16956 Avicennia marina HOM05D005431 ORTHO05D006762 4.8e-85 318.9 323 57.9
Sopen01g052890 Solanum pennellii HOM05D005431 ORTHO05D006762 9.0e-84 314.7 327 57.2
Os03g0326600 Oryza sativa ssp. japonica HOM05D005431 ORTHO05D006762 3.4e-83 312.8 298 63.1
FAN16G2474 Fragaria x ananassa HOM05D005431 ORTHO05D006762 1.0e-82 311.2 315 57.5
RcHm_v2.0_Chr5g0060221 Rosa chinensis HOM05D005431 ORTHO05D006762 4.2e-81 305.8 329 57.1
BraA06t23807Z Brassica rapa HOM05D005431 ORTHO05D006762 4.6e-80 302.4 322 54.3
CDE02G0906 Ceratophyllum demersum HOM05D005431 ORTHO05D006762 5.1e-79 298.9 319 60.5
THA.LOC104805792 Tarenaya hassleriana HOM05D005431 ORTHO05D006762 1.1e-78 297.7 328 54.0
Zm00001eb015560 Zea mays HOM05D005431 ORTHO05D006762 1.5e-78 297.4 314 54.8
AT1G09230 Arabidopsis thaliana HOM05D005431 ORTHO05D006762 1.9e-78 297.0 327 52.6
BolC5t29482H Brassica oleracea HOM05D005431 ORTHO05D006762 2.5e-78 296.6 327 52.6
SGA_v2.0_scaffold32G13347 Striga asiatica HOM05D005431 ORTHO05D006762 9.6e-78 294.7 313 57.8
BcaC05g24779 Brassica carinata HOM05D005431 ORTHO05D006762 2.2e-74 283.5 324 51.2
C05p07240 Brassica napus HOM05D005431 ORTHO05D006762 2.2e-74 283.5 324 51.2
Sp1g07840 Schrenkiella parvula HOM05D005431 ORTHO05D006762 2.2e-74 283.5 311 52.1
ATR0782G102 Amborella trichopoda HOM05D005431 ORTHO05D006762 3.8e-74 282.7 322 59.3
Nn7g35775 Nelumbo nucifera HOM05D005431 ORTHO05D006762 3.8e-74 282.7 330 52.7
A06p05970 Brassica napus HOM05D005431 ORTHO05D006762 4.2e-73 279.3 324 49.4
Thhalv10007645m.g Eutrema salsugineum HOM05D005431 ORTHO05D006762 1.2e-72 277.7 316 50.6
Carub.0001s0857 Capsella rubella HOM05D005431 ORTHO05D006762 3.0e-71 273.1 303 48.8
AL1G19720 Arabidopsis lyrata HOM05D005431 ORTHO05D006762 7.4e-70 268.5 324 48.8
vmacro12472 Vaccinium macrocarpon HOM05D005431 ORTHO05D006762 3.7e-69 266.2 513 41.5
SEGI_41626 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 1.2e-67 261.2 313 51.4
Actinidia02566 Actinidia chinensis HOM05D005431 ORTHO05D006762 7.7e-67 258.5 219 70.3
Aa31LG1G5950 Aethionema arabicum HOM05D005431 ORTHO05D006762 6.5e-66 255.4 341 44.9
CsaV3_6G010080 Cucumis sativus L. HOM05D005431 ORTHO05D006762 1.9e-57 227.3 219 63.9
Sed0005030 Sechium edule HOM05D005431 ORTHO05D006762 2.5e-57 226.9 229 59.4
ClCG02G009850 Citrullus lanatus HOM05D005431 ORTHO05D006762 9.4e-57 224.9 214 64.5
EL10Ac8g19795 Beta vulgaris HOM05D005431 ORTHO05D006762 1.2e-56 224.6 192 71.4
Migut.C00530 Erythranthe guttata HOM05D005431 ORTHO05D006762 1.1e-54 218.0 199 63.3
arahy.Tifrunner.gnm1.ann1.M3GFZ7 Arachis hypogaea HOM05D005431 ORTHO05D006762 2.4e-52 210.3 236 57.6
Aqoxy113s003 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 2.6e-51 206.8 167 63.5
AUR62027554 Chenopodium quinoa HOM05D005431 ORTHO05D006762 1.0e-50 204.9 271 47.6
BcaB03g13279 Brassica carinata HOM05D005431 ORTHO05D006762 5.0e-50 202.6 179 57.5
Hund08532 Selenicereus undatus HOM05D005431 ORTHO05D006762 6.5e-50 202.2 340 44.4
Pp3c5_17010 Physcomitrium patens HOM05D005431 ORTHO05D006762 1.4e-47 194.5 264 50.0
SMO339G0047 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 2.6e-46 190.3 289 43.6
GSVIVG01010771001 Vitis vinifera HOM05D005431 ORTHO05D006762 4.5e-43 179.5 141 68.1
TPR.G5899 Trifolium pratense HOM05D000002 ORTHO05D000001 1.5e-38 164.5 163 63.8
AagrBONN_evm.TU.Sc2ySwM_228.5426 Anthoceros agrestis HOM05D005431 ORTHO05D006762 7.0e-36 155.6 186 51.6
Rhsim03G0115400 Rhododendron simsii HOM05D005431 ORTHO05D006762 5.7e-30 136.0 252 43.7
CBR_g41665 Chara braunii HOM05D005431 ORTHO05D006762 4.1e-28 129.8 341 30.8
GSVIVG01010770001 Vitis vinifera HOM05D005431 ORTHO05D006762 1.2e-27 128.3 137 68.6
MELO3C013491.2 Cucumis melo HOM05D005431 ORTHO05D006762 4.0e-23 113.2 151 53.6
MBI05_g45098_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 1.8e-20 104.4 149 58.4
CARHR009190 Cardamine hirsuta HOM05D005431 ORTHO05D006762 2.0e-19 100.9 150 45.3
SHI14717 Sapria himalayana HOM05D005431 ORTHO05D006762 6.6e-18 95.9 92 57.6
Aqoxy6G02072 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 2.5e-17 94.0 337 30.9
Mapoly0054s0019 Marchantia polymorpha HOM05D005431 ORTHO05D006762 5.6e-17 92.8 153 46.4
Lsat_1_v5_gn_3_133701 Lactuca sativa HOM05D005431 ORTHO05D006762 1.2e-16 91.7 140 50.0
TPR.G552 Trifolium pratense HOM05D005431 ORTHO05D006762 1.4e-15 88.2 79 58.2
RcHm_v2.0_Chr5g0076741 Rosa chinensis HOM05D005431 ORTHO05D006762 1.9e-09 67.8 59 59.3
Ah.14g086750 Amaranthus hybridus HOM05D005431 ORTHO05D006762 9.5e-09 65.5 51 58.8
SHI14719 Sapria himalayana HOM05D005431 ORTHO05D006762 4.7e-08 63.2 33 87.9
SHI14720 Sapria himalayana HOM05D005431 ORTHO05D006762 3.1e-07 60.5 54 51.9
AagrBONN_evm.TU.Sc2ySwM_117.3064__3065 Anthoceros agrestis HOM05D005431 ORTHO05D006762 6.8e-07 59.3 148 40.5


User provided reference genes

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