Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.007G067000 Populus trichocarpa HOM05D003938 ORTHO05D004759 2.5e-117 425.6 245 100.0
Sabra05G0079800 Salix brachista HOM05D003938 ORTHO05D004759 3.1e-51 206.1 199 61.8
Potri.005G097500 Populus trichocarpa HOM05D003938 ORTHO05D004759 7.0e-51 204.9 199 61.3
MD05G1222400 Malus domestica HOM05D003938 ORTHO05D004759 7.0e-43 178.3 199 51.8
Prupe.4G137900 Prunus persica HOM05D003938 ORTHO05D004759 4.6e-42 175.6 114 75.4
Manes.06G173850 Manihot esculenta HOM05D003938 ORTHO05D004759 9.5e-40 167.9 204 52.5
PGR119G1566 Punica granatum HOM05D003938 ORTHO05D004759 2.8e-39 166.4 191 53.9
GSVIVG01020281001 Vitis vinifera HOM05D003938 ORTHO05D004759 2.8e-39 166.4 111 73.0
CSS0016392 Camellia sinensis var. sinensis HOM05D003938 ORTHO05D004759 4.7e-39 165.6 144 60.4
CSS0024659 Camellia sinensis var. sinensis HOM05D003938 ORTHO05D004759 4.7e-39 165.6 144 60.4
RcHm_v2.0_Chr5g0026161 Rosa chinensis HOM05D003938 ORTHO05D004759 4.7e-39 165.6 110 73.6
MD10G1204000 Malus domestica HOM05D003938 ORTHO05D004759 6.2e-39 165.2 196 49.5
CSS0007376 Camellia sinensis var. sinensis HOM05D003938 ORTHO05D004759 1.1e-38 164.5 110 71.8
Nn7g37935 Nelumbo nucifera HOM05D003938 ORTHO05D004759 1.1e-38 164.5 111 73.0
Thecc.09G180900 Theobroma cacao HOM05D003938 ORTHO05D004759 6.8e-38 161.8 204 49.0
FAN16G1651 Fragaria x ananassa HOM05D003938 ORTHO05D004759 3.4e-37 159.5 189 49.7
TAR626G0088 Trochodendron aralioides HOM05D003938 ORTHO05D004759 3.4e-37 159.5 109 72.5
QL04p077115 Quercus lobata HOM05D003938 ORTHO05D004759 7.5e-37 158.3 113 71.7
FvH4_3g15530 Fragaria vesca HOM05D003938 ORTHO05D004759 9.8e-37 157.9 212 46.7
Gohir.A05G003300 Gossypium hirsutum HOM05D003938 ORTHO05D004759 9.8e-37 157.9 208 48.6
FAN21G1947 Fragaria x ananassa HOM05D003938 ORTHO05D004759 1.3e-36 157.5 205 48.8
FAN25G2080 Fragaria x ananassa HOM05D003938 ORTHO05D004759 1.3e-36 157.5 197 49.2
TWI74G0164 Tripterygium wilfordii HOM05D003938 ORTHO05D004759 1.7e-36 157.1 104 74.0
Dinv19621 Davidia involucrata HOM05D003938 ORTHO05D004759 3.7e-36 156.0 210 47.1
CSS0000259 Camellia sinensis var. sinensis HOM05D003938 ORTHO05D004759 6.4e-36 155.2 192 48.4
Solyc07g066420.4 Solanum lycopersicum HOM05D003938 ORTHO05D004759 6.4e-36 155.2 111 71.2
CAN.G943.34 Capsicum annuum HOM05D003938 ORTHO05D004759 1.1e-35 154.5 111 70.3
Nitab4.5_0009317g0010 Nicotiana tabacum HOM05D003938 ORTHO05D004759 5.4e-35 152.1 111 68.5
Glyma.19G004200 Glycine max HOM05D003938 ORTHO05D004759 7.0e-35 151.8 106 70.8
Gorai.009G003300 Gossypium raimondii HOM05D003938 ORTHO05D004759 1.6e-34 150.6 208 47.6
Lj3g0013935 Lotus japonicus HOM05D003938 ORTHO05D004759 1.6e-34 150.6 110 68.2
FAN11G2591 Fragaria x ananassa HOM05D003938 ORTHO05D004759 2.3e-33 146.7 237 41.8
TPR.G22448 Trifolium pratense HOM05D003938 ORTHO05D004759 3.0e-33 146.4 110 70.9
Lalb_Chr01g0007211 Lupinus albus HOM05D003938 ORTHO05D004759 3.9e-33 146.0 103 70.9
PSO675G9176 Papaver somniferum HOM05D003938 ORTHO05D004759 5.0e-33 145.6 111 67.6
TPR.G9407 Trifolium pratense HOM05D003938 ORTHO05D004759 5.0e-33 145.6 110 70.0
Ciclev10004604m.g Citrus clementina HOM05D003938 ORTHO05D004759 6.6e-33 145.2 114 63.2
Glyma.15G213200 Glycine max HOM05D003938 ORTHO05D004759 6.6e-33 145.2 108 66.7
PSO717G0129 Papaver somniferum HOM05D003938 ORTHO05D004759 6.6e-33 145.2 111 67.6
Actinidia07348 Actinidia chinensis HOM05D003938 ORTHO05D004759 1.1e-32 144.4 206 43.7
Peaxi162Scf00452g00848 Petunia axillaris HOM05D003938 ORTHO05D004759 1.1e-32 144.4 111 64.9
Phvul.011G177175 Phaseolus vulgaris HOM05D003938 ORTHO05D004759 1.1e-32 144.4 109 67.0
Nitab4.5_0001749g0120 Nicotiana tabacum HOM05D003938 ORTHO05D004759 1.5e-32 144.1 205 47.3
VMungo1127G1443 Vigna mungo HOM05D003938 ORTHO05D004759 1.5e-32 144.1 214 47.7
Cc05_g16030 Coffea canephora HOM05D003938 ORTHO05D004759 3.3e-32 142.9 197 46.7
Medtr8g442420 Medicago truncatula HOM05D003938 ORTHO05D004759 3.3e-32 142.9 110 68.2
MELO3C012622.2 Cucumis melo HOM05D003938 ORTHO05D004759 7.3e-32 141.7 101 74.3
Psat4g174120 Pisum sativum HOM05D003938 ORTHO05D004759 7.3e-32 141.7 110 69.1
Duzib168G1061 Durio zibethinus HOM05D003938 ORTHO05D004759 1.2e-31 141.0 92 73.9
Medtr6g084140 Medicago truncatula HOM05D003938 ORTHO05D004759 1.2e-31 141.0 110 69.1
Sopen07g034590 Solanum pennellii HOM05D003938 ORTHO05D004759 1.2e-31 141.0 207 45.9
CANSAT80G1380 Cannabis sativa HOM05D003938 ORTHO05D004759 1.6e-31 140.6 109 63.3
MSTRG.16112 Avicennia marina HOM05D003938 ORTHO05D004759 3.6e-31 139.4 206 47.1
HanXRQChr05g0160881 Helianthus annuus HOM05D003938 ORTHO05D004759 4.7e-31 139.0 112 63.4
Atru.chr1.190 Acer truncatum HOM05D003938 ORTHO05D004759 1.4e-30 137.5 194 45.4
Aqoxy3G04185_Aqoxy3G04186 Aquilegia oxysepala HOM05D003938 ORTHO05D004759 1.4e-30 137.5 201 44.3
ClCG09G022610 Citrullus lanatus HOM05D003938 ORTHO05D004759 1.4e-30 137.5 205 47.3
ECA240G3729 Erigeron canadensis HOM05D003938 ORTHO05D004759 4.0e-30 136.0 113 61.9
AL1G62420 Arabidopsis lyrata HOM05D003938 ORTHO05D004759 5.2e-30 135.6 109 64.2
CsaV3_7G022770 Cucumis sativus L. HOM05D003938 ORTHO05D004759 6.8e-30 135.2 101 72.3
SGA_v2.0_scaffold7G03579 Striga asiatica HOM05D003938 ORTHO05D004759 6.8e-30 135.2 206 43.2
THA.LOC104822756 Tarenaya hassleriana HOM05D003938 ORTHO05D004759 6.8e-30 135.2 117 62.4
arahy.Tifrunner.gnm1.ann1.KA488U Arachis hypogaea HOM05D003938 ORTHO05D004759 1.2e-29 134.4 192 45.3
Eucgr.F01467 Eucalyptus grandis HOM05D003938 ORTHO05D004759 1.2e-29 134.4 210 43.3
AT1G53720 Arabidopsis thaliana HOM05D003938 ORTHO05D004759 1.5e-29 134.0 107 63.6
Sed0018665 Sechium edule HOM05D003938 ORTHO05D004759 2.0e-29 133.7 198 46.0
Aa31LG10G170 Aethionema arabicum HOM05D003938 ORTHO05D004759 5.8e-29 132.1 111 63.1
CARHR044020 Cardamine hirsuta HOM05D003938 ORTHO05D004759 5.8e-29 132.1 109 63.3
Carub.0001s4300 Capsella rubella HOM05D003938 ORTHO05D004759 1.7e-28 130.6 110 61.8
arahy.Tifrunner.gnm1.ann1.TD7I6F Arachis hypogaea HOM05D003938 ORTHO05D004759 2.2e-28 130.2 198 43.9
EL10Ac2g03350 Beta vulgaris HOM05D003938 ORTHO05D004759 8.3e-28 128.3 202 44.6
unitig_26.g10081 Utricularia gibba HOM05D003938 ORTHO05D004759 8.3e-28 128.3 108 61.1
Haze_07837 Corylus avellana HOM05D002071 ORTHO05D004759 1.1e-27 127.9 130 54.6
vmacro11660 Vaccinium macrocarpon HOM05D003938 ORTHO05D004759 1.4e-27 127.5 177 44.1
CSS0019207 Camellia sinensis var. sinensis HOM05D003938 ORTHO05D004759 1.9e-27 127.1 81 74.1
Sc09g0007280 Simmondsia chinensis HOM05D003938 ORTHO05D004759 1.9e-27 127.1 202 43.6
AUR62037621 Chenopodium quinoa HOM05D003938 ORTHO05D004759 7.1e-27 125.2 111 60.4
A08p00110 Brassica napus HOM05D000173 ORTHO05D008065 9.2e-27 124.8 110 60.9
C03p93390 Brassica napus HOM05D003938 ORTHO05D008065 9.2e-27 124.8 110 60.9
BraA08t32068Z Brassica rapa HOM05D003938 ORTHO05D008065 9.2e-27 124.8 110 60.9
PSO447G0031 Papaver somniferum HOM05D003938 ORTHO05D004759 9.2e-27 124.8 111 59.5
BcaB04g16924 Brassica carinata HOM05D003938 ORTHO05D004759 1.2e-26 124.4 110 60.9
BolC3t21636H Brassica oleracea HOM05D003938 ORTHO05D008065 1.2e-26 124.4 110 60.9
Thhalv10011414m.g Eutrema salsugineum HOM05D003938 ORTHO05D004759 1.2e-26 124.4 111 61.3
Migut.M01560 Erythranthe guttata HOM05D003938 ORTHO05D004759 1.6e-26 124.0 211 40.8
AUR62040863 Chenopodium quinoa HOM05D003938 ORTHO05D004759 2.7e-26 123.2 111 59.5
Zm00001eb274050 Zea mays HOM05D003938 ORTHO05D004759 7.8e-26 121.7 100 57.0
ATR0763G204 Amborella trichopoda HOM05D003938 ORTHO05D004759 1.0e-25 121.3 117 53.8
Os06g0670500 Oryza sativa ssp. japonica HOM05D003938 ORTHO05D004759 3.0e-25 119.8 126 49.2
CDE01G0219 Ceratophyllum demersum HOM05D003938 ORTHO05D004759 8.6e-25 118.2 119 55.5
Lsat_1_v5_gn_7_71321 Lactuca sativa HOM05D003938 ORTHO05D004759 1.1e-24 117.9 203 40.4
DCAR_013742 Daucus carota HOM05D003938 ORTHO05D004759 3.3e-24 116.3 230 37.8
Ca_12645_v3 Cicer arietinum L. HOM05D003938 ORTHO05D004759 2.1e-23 113.6 173 45.1
PGSC0003DMG400022237 Solanum tuberosum HOM05D003938 ORTHO05D004759 2.8e-23 113.2 195 42.6
Eucgr.F01469 Eucalyptus grandis HOM05D003938 ORTHO05D004759 3.6e-23 112.8 189 44.4
PSO675G8491 Papaver somniferum HOM05D003938 ORTHO05D004759 1.1e-22 111.3 115 53.9
HPP92_008853 Vanilla planifolia HOM05D003938 ORTHO05D004759 1.2e-21 107.8 200 39.5
HPP92_008859 Vanilla planifolia HOM05D003938 ORTHO05D004759 5.8e-21 105.5 200 39.0
AagrBONN_evm.TU.Sc2ySwM_368.1871 Anthoceros agrestis HOM05D003938 ORTHO05D004759 2.9e-20 103.2 125 46.4
Pp3c1_5600 Physcomitrium patens HOM05D003938 ORTHO05D004759 7.8e-18 95.1 123 50.4
Mapoly0010s0175 Marchantia polymorpha HOM05D003938 ORTHO05D004759 2.3e-17 93.6 130 47.7
Gohir.D05G003701 Gossypium hirsutum HOM05D003938 ORTHO05D004759 3.4e-13 79.7 44 88.6
Lj8A187T28 Lonicera japonica HOM05D003938 ORTHO05D004759 4.4e-13 79.3 48 81.2
CiPaw.01G119900 Carya illinoinensis HOM05D003938 ORTHO05D004759 1.3e-12 77.8 49 81.6
Cpa.g.sc331.2 Carica papaya HOM05D003938 ORTHO05D004759 2.4e-11 73.6 156 35.9
SHI21602 Sapria himalayana HOM05D003938 ORTHO05D004759 2.4e-11 73.6 187 36.4
Sp1g38950 Schrenkiella parvula HOM05D003938 ORTHO05D004759 7.1e-11 72.0 109 42.2
Sopen12g023920 Solanum pennellii HOM05D003938 ORTHO05D004759 1.2e-10 71.2 93 45.2
Sopen12g031080 Solanum pennellii HOM05D003938 ORTHO05D004759 2.1e-10 70.5 91 44.0
FAN18G2416 Fragaria x ananassa HOM05D020646 ORTHO05D015666 2.7e-10 70.1 116 37.9
FAN08G3613 Fragaria x ananassa HOM05D020646 ORTHO05D015666 3.5e-10 69.7 111 36.9
PGSC0003DMG400004370 Solanum tuberosum HOM05D003938 ORTHO05D004759 3.5e-10 69.7 93 46.2
Solyc12g049430.1 Solanum lycopersicum HOM05D003938 ORTHO05D004759 4.6e-10 69.3 93 45.2
Solyc12g038120.3 Solanum lycopersicum HOM05D003938 ORTHO05D004759 1.3e-09 67.8 93 45.2
Sopen02g012840 Solanum pennellii HOM05D003938 ORTHO05D004759 3.0e-09 66.6 93 47.3
FvH4_2g09020 Fragaria vesca HOM05D020646 ORTHO05D015666 3.9e-09 66.2 73 45.2
Nitab4.5_0004242g0030 Nicotiana tabacum HOM05D003938 ORTHO05D004759 8.7e-09 65.1 42 73.8
CBR_g2917 Chara braunii HOM05D003938 ORTHO05D004759 1.1e-08 64.7 103 39.8
Carub.0008s0543 Capsella rubella HOM05D003938 ORTHO05D004759 2.5e-08 63.5 125 36.8
FAN24G0581 Fragaria x ananassa HOM05D020646 ORTHO05D015666 2.5e-08 63.5 75 46.7
Haze_26935 Corylus avellana HOM05D003938 ORTHO05D004759 3.3e-08 63.2 44 65.9
PGSC0003DMG400017036 Solanum tuberosum HOM05D003938 ORTHO05D004759 5.6e-08 62.4 37 81.1
SMO351G0536 Selaginella moellendorffii HOM05D003938 ORTHO05D004759 7.3e-08 62.0 53 56.6
PGSC0003DMG400004369 Solanum tuberosum HOM05D003938 ORTHO05D004759 1.3e-07 61.2 37 78.4
Solyc02g061800.2 Solanum lycopersicum HOM05D003938 ORTHO05D004759 6.2e-07 58.9 37 75.7
Sopen12g023950 Solanum pennellii HOM05D003938 ORTHO05D004759 8.1e-07 58.5 37 73.0
Cre11.g479850 Chlamydomonas reinhardtii HOM05D003938 ORTHO05D004759 1.4e-06 57.8 53 56.6
Ciclev10007155m.g Citrus clementina HOM05D003938 ORTHO05D004759 3.1e-06 56.6 34 76.5
Solyc09g018480.1 Solanum lycopersicum HOM05D003938 ORTHO05D004759 5.3e-06 55.8 58 53.4
EL10Ac6g14407 Beta vulgaris HOM05D003938 ORTHO05D004759 6.9e-06 55.5 41 63.4


User provided reference genes

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