Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G098900 Phaseolus vulgaris HOM05D006329 ORTHO05D008357 1.1e-221 773.1 404 100.0
Glyma.10G207800 Glycine max HOM05D006329 ORTHO05D008357 8.8e-192 673.7 408 86.0
Ca_10544_v3 Cicer arietinum L. HOM05D006329 ORTHO05D008357 6.1e-161 571.2 404 76.7
TPR.G10288 Trifolium pratense HOM05D006329 ORTHO05D008357 1.4e-160 570.1 405 76.0
Medtr1g094190 Medicago truncatula HOM05D006329 ORTHO05D008357 4.9e-158 561.6 402 75.4
Lj5g0015116 Lotus japonicus HOM05D006329 ORTHO05D008357 9.2e-157 557.4 414 73.9
VMungo0251G3605 Vigna mungo HOM05D006329 ORTHO05D008357 1.2e-156 557.0 324 88.9
Psat6g180040 Pisum sativum HOM05D006329 ORTHO05D008357 5.9e-156 554.7 405 74.8
arahy.Tifrunner.gnm1.ann1.KFTR8M Arachis hypogaea HOM05D006329 ORTHO05D008357 4.3e-154 548.5 417 72.2
Lalb_Chr21g0313671 Lupinus albus HOM05D006329 ORTHO05D008357 1.2e-145 520.4 427 67.9
arahy.Tifrunner.gnm1.ann1.21BGD2 Arachis hypogaea HOM05D006329 ORTHO05D008357 6.2e-145 518.1 408 70.1
QL08p054507 Quercus lobata HOM05D006329 ORTHO05D008357 9.5e-138 494.2 414 67.6
Prupe.2G208900 Prunus persica HOM05D006329 ORTHO05D008357 1.2e-137 493.8 409 67.5
Atru.chr12.838 Acer truncatum HOM05D003507 ORTHO05D008357 1.8e-136 490.0 385 66.5
RcHm_v2.0_Chr1g0362601 Rosa chinensis HOM05D006329 ORTHO05D008357 3.1e-136 489.2 383 66.1
MD07G1170000 Malus domestica HOM05D006329 ORTHO05D008357 4.0e-136 488.8 409 65.5
QL08p054383 Quercus lobata HOM05D006329 ORTHO05D008357 6.8e-136 488.0 414 66.9
Duzib114G0755 Durio zibethinus HOM05D006329 ORTHO05D008357 1.2e-135 487.3 425 63.8
FAN10G3782 Fragaria x ananassa HOM05D006329 ORTHO05D008357 2.2e-134 483.0 409 63.1
Actinidia34805 Actinidia chinensis HOM05D006329 ORTHO05D008357 2.9e-134 482.6 403 65.0
Solyc11g008360.3 Solanum lycopersicum HOM05D006329 ORTHO05D008357 6.4e-134 481.5 342 70.5
PGR142G3823 Punica granatum HOM05D006329 ORTHO05D008357 8.4e-134 481.1 383 68.1
Sed0004104 Sechium edule HOM05D006329 ORTHO05D008357 8.4e-134 481.1 389 64.5
Potri.008G035500 Populus trichocarpa HOM05D006329 ORTHO05D008357 1.1e-133 480.7 334 71.6
Thecc.10G083200 Theobroma cacao HOM05D006329 ORTHO05D008357 1.1e-133 480.7 340 71.5
MELO3C019822.2 Cucumis melo HOM05D006329 ORTHO05D008357 1.4e-133 480.3 399 66.9
PGSC0003DMG400007434 Solanum tuberosum HOM05D006329 ORTHO05D008357 1.4e-133 480.3 342 70.2
FvH4_7g18810 Fragaria vesca HOM05D006329 ORTHO05D008357 1.9e-133 479.9 383 67.4
Nitab4.5_0001450g0040 Nicotiana tabacum HOM05D006329 ORTHO05D008357 1.9e-133 479.9 377 66.3
Nitab4.5_0001659g0150 Nicotiana tabacum HOM05D006329 ORTHO05D008357 2.4e-133 479.6 377 66.8
CsaV3_6G036680 Cucumis sativus L. HOM05D006329 ORTHO05D008357 1.2e-132 477.2 344 70.3
COL.COLO4_17136 Corchorus olitorius HOM05D006329 ORTHO05D008357 1.6e-132 476.9 420 61.9
FAN10G0068 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.6e-132 476.9 409 62.6
FAN06G3910 Fragaria x ananassa HOM05D006329 ORTHO05D008357 2.1e-132 476.5 401 64.8
Cc02_g10940 Coffea canephora HOM05D006329 ORTHO05D008357 2.7e-132 476.1 344 70.1
Sabra08G0023700 Salix brachista HOM05D006329 ORTHO05D008357 2.7e-132 476.1 400 63.0
Gohir.A10G203300 Gossypium hirsutum HOM05D006329 ORTHO05D008357 7.8e-132 474.6 395 64.8
Gohir.D10G211400 Gossypium hirsutum HOM05D006329 ORTHO05D008357 1.3e-131 473.8 395 64.3
Gorai.011G237100 Gossypium raimondii HOM05D006329 ORTHO05D008357 1.3e-131 473.8 395 64.3
CiPaw.01G268700 Carya illinoinensis HOM05D006329 ORTHO05D008357 6.6e-131 471.5 416 64.9
CANSAT56G2601 Cannabis sativa HOM05D006329 ORTHO05D008357 1.1e-130 470.7 393 66.9
Manes.05G201000 Manihot esculenta HOM05D006329 ORTHO05D008357 2.5e-130 469.5 416 60.8
SalBow6G7241 Salvia bowleyana HOM05D006329 ORTHO05D008357 5.6e-130 468.4 398 63.1
Eucgr.G02867 Eucalyptus grandis HOM05D006329 ORTHO05D008357 9.6e-130 467.6 332 70.8
Haze_16856 Corylus avellana HOM05D006329 ORTHO05D008357 1.2e-129 467.2 349 68.2
Ciclev10031516m.g Citrus clementina HOM05D006329 ORTHO05D008357 1.6e-129 466.8 384 63.8
Nn6g35280 Nelumbo nucifera HOM05D006329 ORTHO05D008357 2.8e-129 466.1 404 61.4
Thhalv10016747m.g Eutrema salsugineum HOM05D006329 ORTHO05D008357 4.7e-129 465.3 401 62.1
BcaB02g09141 Brassica carinata HOM05D006329 ORTHO05D008357 8.1e-129 464.5 415 61.0
TAR623G1379 Trochodendron aralioides HOM05D006329 ORTHO05D008357 8.1e-129 464.5 395 63.3
AL4G36440 Arabidopsis lyrata HOM05D006329 ORTHO05D008357 9.0e-128 461.1 409 60.9
THA.LOC104824234 Tarenaya hassleriana HOM05D006329 ORTHO05D008357 9.0e-128 461.1 397 62.7
MBI18_g02633_MAGBIO Magnolia biondii HOM05D006329 ORTHO05D008357 1.2e-127 460.7 339 68.4
Sp4g21490 Schrenkiella parvula HOM05D006329 ORTHO05D008357 2.0e-127 459.9 417 60.0
AT2G39140 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 7.6e-127 458.0 407 60.7
ClCG08G007690 Citrullus lanatus HOM05D006329 ORTHO05D008357 7.6e-127 458.0 390 65.6
Hma1.2p1_2894F.1_g329960 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 6.4e-126 454.9 341 67.7
FAN06G0494 Fragaria x ananassa HOM05D006329 ORTHO05D008357 2.4e-125 453.0 388 64.2
Aqoxy1G01144 Aquilegia oxysepala HOM05D006329 ORTHO05D008357 4.2e-125 452.2 380 62.6
Migut.F01702 Erythranthe guttata HOM05D006329 ORTHO05D008357 9.3e-125 451.1 328 68.3
CARHR133910 Cardamine hirsuta HOM05D006329 ORTHO05D008357 2.1e-124 449.9 340 66.8
BolC4t22452H Brassica oleracea HOM05D006329 ORTHO05D008357 6.0e-124 448.4 332 67.8
MSTRG.389 Avicennia marina HOM05D006329 ORTHO05D008357 2.3e-123 446.4 404 59.9
Carub.0004s2119 Capsella rubella HOM05D006329 ORTHO05D008357 3.0e-123 446.0 408 59.3
PSO063G6532 Papaver somniferum HOM05D006329 ORTHO05D008357 3.0e-123 446.0 334 66.8
PSO339G5012 Papaver somniferum HOM05D006329 ORTHO05D008357 5.1e-123 445.3 334 67.4
BraA05t19681Z Brassica rapa HOM05D006329 ORTHO05D008357 1.1e-122 444.1 385 62.1
HanXRQChr14g0456591 Helianthus annuus HOM05D006329 ORTHO05D008357 1.1e-122 444.1 335 67.2
BcaC02g12042 Brassica carinata HOM05D006329 ORTHO05D008357 1.5e-122 443.7 333 67.6
C04p08570 Brassica napus HOM05D006329 ORTHO05D008357 1.5e-122 443.7 333 67.6
A05p07160 Brassica napus HOM05D006329 ORTHO05D008357 1.9e-122 443.4 397 60.5
Lsat_1_v5_gn_2_113040 Lactuca sativa HOM05D006329 ORTHO05D008357 5.6e-122 441.8 273 77.3
Sopen11g004170 Solanum pennellii HOM05D006329 ORTHO05D008357 3.6e-121 439.1 305 71.8
GSVIVG01016221001 Vitis vinifera HOM05D006329 ORTHO05D008357 1.8e-120 436.8 272 77.6
Rhsim09G0148200 Rhododendron simsii HOM05D000461 ORTHO05D001829 1.5e-119 433.7 385 60.5
FAN03G2323 Fragaria x ananassa HOM05D003507 ORTHO05D004324 2.9e-118 429.5 314 68.5
Oeu013841.1 Olea europaea HOM05D006329 ORTHO05D008357 3.8e-118 429.1 319 68.0
Peaxi162Scf00145g01311 Petunia axillaris HOM05D006329 ORTHO05D008357 6.4e-118 428.3 346 65.6
Zm00001eb004240 Zea mays HOM05D006329 ORTHO05D008357 8.4e-118 427.9 416 55.5
CDE03G0204 Ceratophyllum demersum HOM05D006329 ORTHO05D008357 1.9e-117 426.8 328 64.9
Ah.02g128110 Amaranthus hybridus HOM05D006329 ORTHO05D008357 1.2e-116 424.1 332 66.3
EL10Ac6g14260 Beta vulgaris HOM05D006329 ORTHO05D008357 1.2e-116 424.1 332 66.9
Cpa.g.sc53.128 Carica papaya HOM05D006329 ORTHO05D008357 1.3e-115 420.6 372 60.5
Cfa001679 Carpinus fangiana HOM05D006329 ORTHO05D008357 1.8e-115 420.2 288 72.2
SGA_v2.0_scaffold51G18714 Striga asiatica HOM05D006329 ORTHO05D008357 3.9e-115 419.1 371 60.6
ATR0219G015 Amborella trichopoda HOM05D006329 ORTHO05D008357 4.3e-114 415.6 324 64.2
ECA238G1295 Erigeron canadensis HOM05D006329 ORTHO05D001676 2.1e-113 413.3 257 76.7
EL10Ac4g09587 Beta vulgaris HOM05D006329 ORTHO05D008357 1.1e-112 411.0 335 65.7
vmacro04842 Vaccinium macrocarpon HOM05D006329 ORTHO05D008357 2.6e-111 406.4 402 57.2
CAN.G321.64 Capsicum annuum HOM05D006329 ORTHO05D008357 5.8e-111 405.2 251 77.7
HPP92_026018 Vanilla planifolia HOM05D006329 ORTHO05D008357 1.4e-109 400.6 340 60.3
DCAR_005490 Daucus carota HOM05D006329 ORTHO05D008357 3.2e-109 399.4 295 68.5
HPP92_027741 Vanilla planifolia HOM05D006329 ORTHO05D008357 3.7e-105 386.0 312 64.1
Os03g0152700 Oryza sativa ssp. japonica HOM05D006329 ORTHO05D008357 3.1e-104 382.9 305 64.3
Hund20700 Selenicereus undatus HOM05D006329 ORTHO05D008357 3.1e-104 382.9 491 48.9
CSS0005771 Camellia sinensis var. sinensis HOM05D006329 ORTHO05D008357 2.2e-102 376.7 403 54.1
Lalb_Chr21g0313541 Lupinus albus HOM05D006329 ORTHO05D008357 2.3e-99 366.7 210 82.9
RhsimUnG0185600 Rhododendron simsii HOM05D000461 ORTHO05D001829 9.7e-98 361.3 349 57.9
Dinv31231 Davidia involucrata HOM05D006329 ORTHO05D008357 2.2e-97 360.1 324 61.7
AUR62002759 Chenopodium quinoa HOM05D006329 ORTHO05D008357 7.6e-95 351.7 287 64.8
Lj3A938T44 Lonicera japonica HOM05D006329 ORTHO05D008357 9.3e-93 344.7 377 53.8
Mapoly0002s0007 Marchantia polymorpha HOM05D006329 ORTHO05D008357 1.8e-88 330.5 267 59.9
Cfa001678 Carpinus fangiana HOM05D006329 ORTHO05D008357 1.6e-84 317.4 228 71.5
Pp3c7_13640 Physcomitrium patens HOM05D006329 ORTHO05D008357 4.7e-84 315.8 291 56.7
Aa31LG5G20460 Aethionema arabicum HOM05D006329 ORTHO05D008357 4.8e-81 305.8 340 52.1
SMO329G0071 Selaginella moellendorffii HOM05D006329 ORTHO05D008357 4.1e-80 302.8 252 58.7
Sc09g0006060 Simmondsia chinensis HOM05D006329 ORTHO05D008357 1.2e-68 264.6 176 73.9
FAN01G2166 Fragaria x ananassa HOM05D006329 ORTHO05D008357 5.2e-67 259.2 187 69.5
HPP92_026744 Vanilla planifolia HOM05D006329 ORTHO05D008357 4.2e-61 239.6 240 54.6
CBR_g29624 Chara braunii HOM05D006329 ORTHO05D008357 5.9e-55 219.2 162 64.8
MCO14G528 Micromonas commoda HOM05D006329 ORTHO05D008357 8.9e-51 205.3 254 44.1
Cre02.g095121 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 4.1e-48 196.4 331 38.7
PRCOL_00004574 Prasinoderma coloniale HOM05D006329 ORTHO05D008357 2.1e-44 184.1 253 42.3
AUR62014125 Chenopodium quinoa HOM05D006329 ORTHO05D008357 2.2e-41 174.1 155 60.6
Hma1.2p1_2894F.1_g329970 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 1.3e-30 138.3 82 75.6
CAN.G176.13 Capsicum annuum HOM05D006329 ORTHO05D033978 1.2e-28 131.7 83 73.5
Pp3s196_90 Physcomitrium patens HOM05D006329 ORTHO05D008357 1.2e-28 131.7 246 32.5
AT3G43340 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 8.3e-25 119.0 74 74.3
Hma1.2p1_2894F.1_g329973 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 4.7e-20 103.2 61 75.4
Cre07.g323550 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 2.2e-17 94.4 252 30.2
Glyma.20G182966 Glycine max HOM05D006329 ORTHO05D028485 2.2e-17 94.4 88 58.0
Lalb_Chr21g0313531 Lupinus albus HOM05D006329 ORTHO05D008357 3.3e-13 80.5 113 45.1
MCO04G216 Micromonas commoda HOM05D006329 ORTHO05D008357 9.6e-13 79.0 260 26.9
CAN.G184.4 Capsicum annuum HOM05D006329 ORTHO05D028485 1.8e-11 74.7 70 54.3
MCO01G641 Micromonas commoda HOM05D006329 ORTHO05D008357 6.4e-09 66.2 230 26.1
Potri.010G226901 Populus trichocarpa HOM05D006329 ORTHO05D028485 4.2e-08 63.5 51 60.8
Glyma.20G183032 Glycine max HOM05D006329 ORTHO05D213530 2.1e-07 61.2 56 69.6


User provided reference genes

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