Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G4368 Papaver somniferum HOM05D005431 ORTHO05D006762 5.1e-255 884.0 479 100.0
PSO339G6142 Papaver somniferum HOM05D005431 ORTHO05D006762 1.3e-237 826.2 493 91.1
TAR633G0900 Trochodendron aralioides HOM05D005431 ORTHO05D006762 7.0e-188 661.0 457 75.7
MBI13_g30325_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 1.9e-177 626.3 451 75.6
Aqoxy2G02389 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 3.0e-175 619.0 459 70.2
Thecc.05G259000 Theobroma cacao HOM05D005431 ORTHO05D006762 1.6e-171 606.7 469 71.4
Aqoxy6G02574 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.3e-170 603.6 460 69.6
GSVIVG01020933001 Vitis vinifera HOM05D005431 ORTHO05D006762 1.3e-170 603.6 460 73.3
QL07p020652 Quercus lobata HOM05D005431 ORTHO05D006762 1.5e-169 600.1 447 73.8
Gohir.A11G240400 Gossypium hirsutum HOM05D005431 ORTHO05D006762 6.2e-168 594.7 469 70.4
Dinv18088 Davidia involucrata HOM05D005431 ORTHO05D006762 4.0e-167 592.0 454 70.3
Lj1A1139T47 Lonicera japonica HOM05D005431 ORTHO05D006762 3.2e-164 582.4 454 70.0
Gohir.D11G249800 Gossypium hirsutum HOM05D005431 ORTHO05D006762 1.2e-163 580.5 469 69.7
COL.COLO4_08630 Corchorus olitorius HOM05D005431 ORTHO05D006762 2.0e-163 579.7 475 68.2
Gorai.007G267600 Gossypium raimondii HOM05D005431 ORTHO05D006762 3.0e-162 575.9 469 69.5
Manes.08G148100 Manihot esculenta HOM05D005431 ORTHO05D006762 3.0e-162 575.9 455 69.9
CSS0010563 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 6.6e-162 574.7 451 71.2
Duzib177G0804 Durio zibethinus HOM05D005431 ORTHO05D006762 6.2e-160 568.2 471 67.9
Potri.013G054300 Populus trichocarpa HOM05D005431 ORTHO05D006762 1.4e-159 567.0 469 68.4
CiPaw.10G000400 Carya illinoinensis HOM05D005431 ORTHO05D006762 5.2e-159 565.1 455 70.8
Sc24g0002060 Simmondsia chinensis HOM05D005431 ORTHO05D006762 7.5e-158 561.2 455 69.0
TWI32G0483 Tripterygium wilfordii HOM05D005431 ORTHO05D006762 2.2e-157 559.7 457 68.1
arahy.Tifrunner.gnm1.ann1.UBW8VJ Arachis hypogaea HOM05D005431 ORTHO05D006762 1.4e-156 557.0 440 69.8
Ciclev10020067m.g Citrus clementina HOM05D005431 ORTHO05D006762 4.1e-156 555.4 461 68.3
Lalb_Chr14g0364381 Lupinus albus HOM05D005431 ORTHO05D006762 4.1e-156 555.4 440 69.1
Lj1g0019204 Lotus japonicus HOM05D005431 ORTHO05D006762 1.2e-155 553.9 447 68.9
Glyma.16G042800 Glycine max HOM05D005431 ORTHO05D006762 1.6e-155 553.5 446 67.5
Sabra13G0049000 Salix brachista HOM05D005431 ORTHO05D006762 1.6e-155 553.5 469 68.0
Eucgr.A02076 Eucalyptus grandis HOM05D005431 ORTHO05D006762 3.5e-155 552.4 450 68.4
Glyma.19G109200 Glycine max HOM05D005431 ORTHO05D006762 3.0e-154 549.3 446 68.6
CSS0005177 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 5.1e-154 548.5 451 69.4
Prupe.6G097200 Prunus persica HOM05D005431 ORTHO05D006762 1.5e-153 547.0 470 66.0
Atru.chr2.1265 Acer truncatum HOM05D005431 ORTHO05D006762 2.1e-152 543.1 460 67.0
HPP92_006679 Vanilla planifolia HOM05D005431 ORTHO05D006762 2.8e-152 542.7 460 65.9
Rhsim06G0113900 Rhododendron simsii HOM05D005431 ORTHO05D006762 6.2e-152 541.6 484 63.8
Medtr7g085290 Medicago truncatula HOM05D005431 ORTHO05D006762 8.9e-151 537.7 441 66.9
Nn7g35775 Nelumbo nucifera HOM05D005431 ORTHO05D006762 1.5e-150 537.0 472 61.7
MD03G1112900 Malus domestica HOM05D005431 ORTHO05D006762 7.6e-150 534.6 444 67.8
ECA233G5562 Erigeron canadensis HOM05D005431 ORTHO05D006762 1.4e-148 530.4 443 66.8
HanXRQChr02g0054501 Helianthus annuus HOM05D005431 ORTHO05D006762 3.2e-148 529.3 450 66.9
Ca_08254_v3 Cicer arietinum L. HOM05D005431 ORTHO05D006762 1.2e-147 527.3 440 65.9
SalBow1G3497 Salvia bowleyana HOM05D005431 ORTHO05D006762 1.2e-147 527.3 443 65.9
Oeu051845.1 Olea europaea HOM05D005431 ORTHO05D006762 4.6e-147 525.4 454 65.4
CANSAT78G0764 Cannabis sativa HOM05D005431 ORTHO05D006762 1.7e-146 523.5 462 65.2
AUR62035802 Chenopodium quinoa HOM05D005431 ORTHO05D006762 3.9e-146 522.3 458 64.0
Phvul.001G100700 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 5.1e-146 521.9 438 65.3
Lsat_1_v5_gn_6_37921 Lactuca sativa HOM05D005431 ORTHO05D006762 1.9e-145 520.0 445 64.0
Peaxi162Scf00362g01188 Petunia axillaris HOM05D005431 ORTHO05D006762 1.9e-145 520.0 447 64.9
Cfa016425 Carpinus fangiana HOM05D005431 ORTHO05D006762 1.1e-143 514.2 429 68.8
Os03g0326600 Oryza sativa ssp. japonica HOM05D005431 ORTHO05D006762 3.1e-143 512.7 442 64.3
Psat3g089720 Pisum sativum HOM05D005431 ORTHO05D006762 2.0e-142 510.0 440 66.1
Duzib128G1128 Durio zibethinus HOM05D005431 ORTHO05D006762 7.6e-142 508.1 467 63.6
MSTRG.16956 Avicennia marina HOM05D005431 ORTHO05D006762 2.9e-141 506.1 447 62.9
Cc10_g14020 Coffea canephora HOM05D005431 ORTHO05D006762 2.9e-141 506.1 459 62.5
Haze_19398 Corylus avellana HOM05D005431 ORTHO05D006762 6.4e-141 505.0 448 66.1
FvH4_3g32950 Fragaria vesca HOM05D005431 ORTHO05D006762 1.1e-140 504.2 450 65.8
PGR042G1130 Punica granatum HOM05D005431 ORTHO05D006762 1.1e-140 504.2 448 64.7
Solyc01g110820.4 Solanum lycopersicum HOM05D005431 ORTHO05D006762 3.2e-140 502.7 444 63.3
PGSC0003DMG400001606 Solanum tuberosum HOM05D005431 ORTHO05D006762 5.4e-140 501.9 447 63.1
THA.LOC104805792 Tarenaya hassleriana HOM05D005431 ORTHO05D006762 1.2e-139 500.7 454 60.8
CDE02G0906 Ceratophyllum demersum HOM05D005431 ORTHO05D006762 2.1e-139 500.0 443 63.4
FAN16G2474 Fragaria x ananassa HOM05D005431 ORTHO05D006762 2.1e-139 500.0 448 63.4
Zm00001eb015560 Zea mays HOM05D005431 ORTHO05D006762 7.8e-139 498.0 444 61.5
ATR0782G102 Amborella trichopoda HOM05D005431 ORTHO05D006762 1.7e-138 496.9 467 62.5
VMungo1383G2520 Vigna mungo HOM05D005431 ORTHO05D006762 4.8e-136 488.8 412 65.8
FAN11G0735 Fragaria x ananassa HOM05D005431 ORTHO05D006762 2.4e-135 486.5 441 64.9
AT1G09230 Arabidopsis thaliana HOM05D005431 ORTHO05D006762 5.3e-135 485.3 442 58.8
TPR.G5901 Trifolium pratense HOM05D005431 ORTHO05D006762 5.3e-135 485.3 488 57.6
Thhalv10007645m.g Eutrema salsugineum HOM05D005431 ORTHO05D006762 6.9e-135 485.0 455 57.4
Sopen01g052890 Solanum pennellii HOM05D005431 ORTHO05D006762 9.0e-135 484.6 444 61.0
RcHm_v2.0_Chr5g0060221 Rosa chinensis HOM05D005431 ORTHO05D006762 1.2e-134 484.2 443 63.4
Sp1g07840 Schrenkiella parvula HOM05D005431 ORTHO05D006762 1.2e-134 484.2 448 58.3
SGA_v2.0_scaffold32G13347 Striga asiatica HOM05D005431 ORTHO05D006762 1.2e-134 484.2 454 61.2
BolC5t29482H Brassica oleracea HOM05D005431 ORTHO05D006762 9.9e-134 481.1 450 58.7
BraA06t23807Z Brassica rapa HOM05D005431 ORTHO05D006762 2.4e-132 476.5 450 58.9
C05p07240 Brassica napus HOM05D005431 ORTHO05D006762 7.1e-132 474.9 440 58.4
Nitab4.5_0001364g0090 Nicotiana tabacum HOM05D005431 ORTHO05D006762 7.1e-132 474.9 421 65.6
A06p05970 Brassica napus HOM05D005431 ORTHO05D006762 4.6e-131 472.2 440 58.0
Carub.0001s0857 Capsella rubella HOM05D005431 ORTHO05D006762 1.9e-129 466.8 444 56.1
Cfa011866 Carpinus fangiana HOM05D005431 ORTHO05D006762 8.1e-128 461.5 384 69.8
AL1G19720 Arabidopsis lyrata HOM05D005431 ORTHO05D006762 4.0e-127 459.1 439 56.7
vmacro12472 Vaccinium macrocarpon HOM05D005431 ORTHO05D006762 2.6e-126 456.4 614 49.8
Haze_21236 Corylus avellana HOM05D005431 ORTHO05D006762 2.9e-125 453.0 384 68.5
BcaC05g24779 Brassica carinata HOM05D005431 ORTHO05D006762 8.4e-125 451.4 448 55.8
arahy.Tifrunner.gnm1.ann1.H79Q9S Arachis hypogaea HOM05D005431 ORTHO05D006762 1.4e-124 450.7 440 60.2
Actinidia02566 Actinidia chinensis HOM05D005431 ORTHO05D006762 1.1e-121 441.0 347 70.6
Aa31LG1G5950 Aethionema arabicum HOM05D005431 ORTHO05D006762 1.5e-121 440.7 485 53.0
Sed0005030 Sechium edule HOM05D005431 ORTHO05D006762 2.2e-117 426.8 341 67.4
Migut.C00530 Erythranthe guttata HOM05D005431 ORTHO05D006762 9.6e-113 411.4 319 68.3
SEGI_41626 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 1.8e-111 407.1 446 52.5
EL10Ac8g19795 Beta vulgaris HOM05D005431 ORTHO05D006762 9.0e-111 404.8 327 70.9
Cpa.g.sc594.2 Carica papaya HOM05D005431 ORTHO05D006762 7.9e-107 391.7 370 64.6
arahy.Tifrunner.gnm1.ann1.M3GFZ7 Arachis hypogaea HOM05D005431 ORTHO05D006762 3.9e-106 389.4 401 60.3
AUR62027554 Chenopodium quinoa HOM05D005431 ORTHO05D006762 3.7e-104 382.9 406 53.7
CsaV3_6G010080 Cucumis sativus L. HOM05D005431 ORTHO05D006762 6.1e-99 365.5 317 67.2
Potri.019G031700 Populus trichocarpa HOM05D005431 ORTHO05D006762 1.4e-98 364.4 323 66.6
GSVIVG01010770001 Vitis vinifera HOM05D005431 ORTHO05D006762 3.9e-90 336.3 263 73.4
SMO339G0047 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 2.0e-89 334.0 401 47.1
Pp3c5_17010 Physcomitrium patens HOM05D005431 ORTHO05D006762 2.9e-85 320.1 400 50.8
ClCG02G009850 Citrullus lanatus HOM05D005431 ORTHO05D006762 1.1e-81 308.1 280 66.1
AagrBONN_evm.TU.Sc2ySwM_228.5426 Anthoceros agrestis HOM05D005431 ORTHO05D006762 1.7e-80 304.3 340 52.1
Aqoxy113s003 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 5.0e-77 292.7 428 43.9
CARHR009190 Cardamine hirsuta HOM05D005431 ORTHO05D006762 7.2e-76 288.9 273 56.8
Rhsim03G0115400 Rhododendron simsii HOM05D005431 ORTHO05D006762 1.2e-59 235.0 347 46.4
Hund08532 Selenicereus undatus HOM05D005431 ORTHO05D006762 2.3e-58 230.7 356 46.9
CBR_g41665 Chara braunii HOM05D005431 ORTHO05D006762 2.6e-57 227.3 588 32.8
Mapoly0054s0019 Marchantia polymorpha HOM05D005431 ORTHO05D006762 5.7e-57 226.1 286 48.6
BcaB03g13279 Brassica carinata HOM05D005431 ORTHO05D006762 8.3e-56 222.2 194 61.3
GSVIVG01010771001 Vitis vinifera HOM05D005431 ORTHO05D006762 4.6e-46 189.9 159 63.5
MBI05_g45098_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 6.2e-43 179.5 172 71.5
AagrBONN_evm.TU.Sc2ySwM_117.3064__3065 Anthoceros agrestis HOM05D005431 ORTHO05D006762 1.4e-42 178.3 257 47.1
TPR.G5899 Trifolium pratense HOM05D000002 ORTHO05D000001 5.2e-42 176.4 166 65.1
Hund08530 Selenicereus undatus HOM05D005431 ORTHO05D006762 3.7e-40 170.2 98 82.7
Cpa.g.sc3384.1 Carica papaya HOM05D005431 ORTHO05D006762 8.3e-40 169.1 102 81.4
Aqoxy6G02072 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.1e-36 158.7 352 34.1
Phvul.004G137800 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 3.3e-36 157.1 93 76.3
MELO3C013491.2 Cucumis melo HOM05D005431 ORTHO05D006762 2.8e-35 154.1 180 58.9
MBI05_g33993_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 1.3e-24 118.6 100 63.0
TPR.G552 Trifolium pratense HOM05D005431 ORTHO05D006762 2.9e-24 117.5 113 57.5
Lsat_1_v5_gn_3_133701 Lactuca sativa HOM05D005431 ORTHO05D006762 7.8e-22 109.4 135 51.9
Pp3c25_8310 Physcomitrium patens HOM05D005431 ORTHO05D006762 2.6e-17 94.4 146 40.4
SHI14717 Sapria himalayana HOM05D005431 ORTHO05D006762 2.2e-16 91.3 107 54.2
TPR.G5921 Trifolium pratense HOM05D005431 ORTHO05D006762 4.9e-16 90.1 54 72.2
SHI14712 Sapria himalayana HOM05D000001 ORTHO05D009229 1.9e-15 88.2 49 79.6
AagrBONN_evm.TU.Sc2ySwM_228.2880 Anthoceros agrestis HOM05D005431 ORTHO05D006762 4.2e-15 87.0 101 43.6
C08p12570 Brassica napus HOM05D005431 ORTHO05D006762 9.3e-15 85.9 50 78.0
BolC8t48895H Brassica oleracea HOM05D005431 ORTHO05D006762 9.3e-15 85.9 50 78.0
SMO116G0263 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 1.6e-11 75.1 81 45.7
SGA_v2.0_scaffold612G53193 Striga asiatica HOM05D005431 ORTHO05D006762 4.8e-11 73.6 50 66.0
SHI14714 Sapria himalayana HOM05D005431 ORTHO05D006762 5.3e-10 70.1 52 63.5
CAN.G134.235 Capsicum annuum HOM05D005431 ORTHO05D006762 1.2e-09 68.9 56 60.7
SHI14719 Sapria himalayana HOM05D005431 ORTHO05D006762 2.2e-08 64.7 63 58.7
ClCG02G009830 Citrullus lanatus HOM05D005431 ORTHO05D006762 3.8e-08 63.9 41 70.7
SEGI_17961 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 4.9e-08 63.5 118 34.7
Ah.14g086750 Amaranthus hybridus HOM05D005431 ORTHO05D006762 8.4e-08 62.8 43 67.4
RcHm_v2.0_Chr5g0076741 Rosa chinensis HOM05D005431 ORTHO05D006762 8.4e-08 62.8 60 60.0
Lsat_1_v5_gn_6_94960 Lactuca sativa HOM05D005431 ORTHO05D003355 1.9e-07 61.6 48 62.5


User provided reference genes

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