Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G6142 Papaver somniferum HOM05D005431 ORTHO05D006762 3.7e-261 904.4 493 100.0
PSO384G4368 Papaver somniferum HOM05D005431 ORTHO05D006762 3.1e-239 831.6 493 91.1
TAR633G0900 Trochodendron aralioides HOM05D005431 ORTHO05D006762 2.4e-191 672.5 458 76.6
Aqoxy2G02389 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.9e-180 636.3 459 71.0
MBI13_g30325_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 4.8e-176 621.7 460 72.6
Aqoxy6G02574 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.8e-175 619.8 460 70.0
Thecc.05G259000 Theobroma cacao HOM05D005431 ORTHO05D006762 8.0e-171 604.4 478 68.8
QL07p020652 Quercus lobata HOM05D005431 ORTHO05D006762 4.0e-170 602.1 450 73.1
Dinv18088 Davidia involucrata HOM05D005431 ORTHO05D006762 7.5e-169 597.8 451 70.7
GSVIVG01020933001 Vitis vinifera HOM05D005431 ORTHO05D006762 7.0e-167 591.3 462 70.1
Gohir.A11G240400 Gossypium hirsutum HOM05D005431 ORTHO05D006762 2.0e-166 589.7 487 67.1
Lj1A1139T47 Lonicera japonica HOM05D005431 ORTHO05D006762 3.5e-166 589.0 456 69.7
Manes.08G148100 Manihot esculenta HOM05D005431 ORTHO05D006762 1.9e-164 583.2 457 70.2
CSS0010563 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 3.3e-164 582.4 444 71.8
COL.COLO4_08630 Corchorus olitorius HOM05D005431 ORTHO05D006762 8.0e-163 577.8 484 66.5
Gohir.D11G249800 Gossypium hirsutum HOM05D005431 ORTHO05D006762 5.2e-162 575.1 478 66.9
Potri.013G054300 Populus trichocarpa HOM05D005431 ORTHO05D006762 7.5e-161 571.2 472 67.2
Gorai.007G267600 Gossypium raimondii HOM05D005431 ORTHO05D006762 1.3e-160 570.5 478 66.7
TWI32G0483 Tripterygium wilfordii HOM05D005431 ORTHO05D006762 1.1e-159 567.4 455 69.9
Sc24g0002060 Simmondsia chinensis HOM05D005431 ORTHO05D006762 1.6e-158 563.5 464 67.5
Duzib177G0804 Durio zibethinus HOM05D005431 ORTHO05D006762 2.7e-158 562.8 486 64.6
Glyma.16G042800 Glycine max HOM05D005431 ORTHO05D006762 3.5e-158 562.4 455 66.8
CiPaw.10G000400 Carya illinoinensis HOM05D005431 ORTHO05D006762 4.5e-158 562.0 450 69.3
Lalb_Chr14g0364381 Lupinus albus HOM05D005431 ORTHO05D006762 1.0e-157 560.8 449 67.9
Glyma.19G109200 Glycine max HOM05D005431 ORTHO05D006762 3.8e-157 558.9 455 67.9
CSS0005177 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 6.6e-157 558.1 444 69.6
Sabra13G0049000 Salix brachista HOM05D005431 ORTHO05D006762 8.6e-157 557.8 472 67.2
Ciclev10020067m.g Citrus clementina HOM05D005431 ORTHO05D006762 4.3e-156 555.4 461 68.1
Lj1g0019204 Lotus japonicus HOM05D005431 ORTHO05D006762 9.5e-156 554.3 456 66.9
Prupe.6G097200 Prunus persica HOM05D005431 ORTHO05D006762 9.5e-156 554.3 478 65.9
Eucgr.A02076 Eucalyptus grandis HOM05D005431 ORTHO05D006762 2.8e-155 552.7 453 66.9
MD03G1112900 Malus domestica HOM05D005431 ORTHO05D006762 1.4e-154 550.4 453 68.2
arahy.Tifrunner.gnm1.ann1.UBW8VJ Arachis hypogaea HOM05D005431 ORTHO05D006762 2.3e-154 549.7 449 67.0
Medtr7g085290 Medicago truncatula HOM05D005431 ORTHO05D006762 2.3e-154 549.7 450 66.4
Rhsim06G0113900 Rhododendron simsii HOM05D005431 ORTHO05D006762 1.5e-153 547.0 487 63.7
HPP92_006679 Vanilla planifolia HOM05D005431 ORTHO05D006762 5.8e-153 545.0 469 64.8
Nn7g35775 Nelumbo nucifera HOM05D005431 ORTHO05D006762 6.4e-152 541.6 456 63.6
Atru.chr2.1265 Acer truncatum HOM05D005431 ORTHO05D006762 1.9e-151 540.0 456 66.0
Ca_08254_v3 Cicer arietinum L. HOM05D005431 ORTHO05D006762 7.8e-150 534.6 449 65.5
Oeu051845.1 Olea europaea HOM05D005431 ORTHO05D006762 1.0e-149 534.3 457 64.8
ECA233G5562 Erigeron canadensis HOM05D005431 ORTHO05D006762 3.0e-149 532.7 446 66.8
Phvul.001G100700 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 4.3e-148 528.9 447 64.7
HanXRQChr02g0054501 Helianthus annuus HOM05D005431 ORTHO05D006762 2.1e-147 526.6 451 64.7
Lsat_1_v5_gn_6_37921 Lactuca sativa HOM05D005431 ORTHO05D006762 3.1e-146 522.7 455 63.3
Peaxi162Scf00362g01188 Petunia axillaris HOM05D005431 ORTHO05D006762 4.0e-146 522.3 450 64.4
CANSAT78G0764 Cannabis sativa HOM05D005431 ORTHO05D006762 2.0e-145 520.0 477 62.9
AUR62035802 Chenopodium quinoa HOM05D005431 ORTHO05D006762 2.6e-145 519.6 467 62.1
ATR0782G102 Amborella trichopoda HOM05D005431 ORTHO05D006762 3.4e-145 519.2 472 62.9
Os03g0326600 Oryza sativa ssp. japonica HOM05D005431 ORTHO05D006762 3.4e-145 519.2 451 63.2
SalBow1G3497 Salvia bowleyana HOM05D005431 ORTHO05D006762 3.4e-145 519.2 451 64.5
Cc10_g14020 Coffea canephora HOM05D005431 ORTHO05D006762 5.8e-145 518.5 464 63.6
MSTRG.16956 Avicennia marina HOM05D005431 ORTHO05D006762 1.4e-143 513.8 456 62.1
Psat3g089720 Pisum sativum HOM05D005431 ORTHO05D006762 1.9e-143 513.5 449 63.9
Cfa016425 Carpinus fangiana HOM05D005431 ORTHO05D006762 1.2e-142 510.8 433 66.5
PGR042G1130 Punica granatum HOM05D005431 ORTHO05D006762 7.8e-142 508.1 450 63.3
CDE02G0906 Ceratophyllum demersum HOM05D005431 ORTHO05D006762 1.0e-141 507.7 451 62.1
Solyc01g110820.4 Solanum lycopersicum HOM05D005431 ORTHO05D006762 1.0e-141 507.7 452 62.4
Duzib128G1128 Durio zibethinus HOM05D005431 ORTHO05D006762 1.7e-141 506.9 476 61.3
FvH4_3g32950 Fragaria vesca HOM05D005431 ORTHO05D006762 2.3e-141 506.5 455 64.8
PGSC0003DMG400001606 Solanum tuberosum HOM05D005431 ORTHO05D006762 2.3e-141 506.5 450 62.2
Zm00001eb015560 Zea mays HOM05D005431 ORTHO05D006762 2.3e-141 506.5 453 60.5
Haze_19398 Corylus avellana HOM05D005431 ORTHO05D006762 3.0e-141 506.1 451 65.0
THA.LOC104805792 Tarenaya hassleriana HOM05D005431 ORTHO05D006762 1.1e-140 504.2 452 61.3
FAN16G2474 Fragaria x ananassa HOM05D005431 ORTHO05D006762 3.3e-140 502.7 457 62.6
TPR.G5901 Trifolium pratense HOM05D005431 ORTHO05D006762 4.7e-139 498.8 497 57.5
VMungo1383G2520 Vigna mungo HOM05D005431 ORTHO05D006762 4.0e-138 495.7 421 64.8
RcHm_v2.0_Chr5g0060221 Rosa chinensis HOM05D005431 ORTHO05D006762 2.0e-137 493.4 451 64.3
BolC5t29482H Brassica oleracea HOM05D005431 ORTHO05D006762 9.9e-137 491.1 451 58.8
FAN11G0735 Fragaria x ananassa HOM05D005431 ORTHO05D006762 2.2e-136 490.0 446 64.1
Sopen01g052890 Solanum pennellii HOM05D005431 ORTHO05D006762 3.7e-136 489.2 449 59.7
BraA06t23807Z Brassica rapa HOM05D005431 ORTHO05D006762 8.3e-136 488.0 451 59.2
Thhalv10007645m.g Eutrema salsugineum HOM05D005431 ORTHO05D006762 3.5e-134 482.6 467 56.1
Sp1g07840 Schrenkiella parvula HOM05D005431 ORTHO05D006762 4.6e-134 482.3 459 58.4
SGA_v2.0_scaffold32G13347 Striga asiatica HOM05D005431 ORTHO05D006762 1.0e-133 481.1 463 59.0
AT1G09230 Arabidopsis thaliana HOM05D005431 ORTHO05D006762 1.7e-133 480.3 448 57.4
A06p05970 Brassica napus HOM05D005431 ORTHO05D006762 2.5e-132 476.5 450 58.9
Nitab4.5_0001364g0090 Nicotiana tabacum HOM05D005431 ORTHO05D006762 4.3e-132 475.7 423 63.6
C05p07240 Brassica napus HOM05D005431 ORTHO05D006762 5.6e-132 475.3 450 58.7
Cfa011866 Carpinus fangiana HOM05D005431 ORTHO05D006762 1.3e-128 464.2 388 67.8
vmacro12472 Vaccinium macrocarpon HOM05D005431 ORTHO05D006762 1.3e-128 464.2 614 49.8
Carub.0001s0857 Capsella rubella HOM05D005431 ORTHO05D006762 8.4e-128 461.5 448 56.7
AL1G19720 Arabidopsis lyrata HOM05D005431 ORTHO05D006762 4.6e-126 455.7 448 57.4
BcaC05g24779 Brassica carinata HOM05D005431 ORTHO05D006762 6.6e-125 451.8 458 56.1
Haze_21236 Corylus avellana HOM05D005431 ORTHO05D006762 2.5e-124 449.9 381 67.5
Aa31LG1G5950 Aethionema arabicum HOM05D005431 ORTHO05D006762 3.3e-124 449.5 494 53.0
arahy.Tifrunner.gnm1.ann1.H79Q9S Arachis hypogaea HOM05D005431 ORTHO05D006762 2.8e-123 446.4 449 58.6
Actinidia02566 Actinidia chinensis HOM05D005431 ORTHO05D006762 4.7e-123 445.7 351 69.5
Sed0005030 Sechium edule HOM05D005431 ORTHO05D006762 9.9e-121 438.0 343 67.9
SEGI_41626 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 8.1e-115 418.3 455 52.7
Migut.C00530 Erythranthe guttata HOM05D005431 ORTHO05D006762 4.5e-113 412.5 328 67.1
EL10Ac8g19795 Beta vulgaris HOM05D005431 ORTHO05D006762 6.0e-110 402.1 336 68.2
Cpa.g.sc594.2 Carica papaya HOM05D005431 ORTHO05D006762 3.1e-106 389.8 375 62.1
arahy.Tifrunner.gnm1.ann1.M3GFZ7 Arachis hypogaea HOM05D005431 ORTHO05D006762 4.9e-104 382.5 410 57.1
AUR62027554 Chenopodium quinoa HOM05D005431 ORTHO05D006762 1.4e-103 380.9 414 52.9
CsaV3_6G010080 Cucumis sativus L. HOM05D005431 ORTHO05D006762 1.0e-101 374.8 319 66.5
Potri.019G031700 Populus trichocarpa HOM05D005431 ORTHO05D006762 2.1e-99 367.1 326 64.7
SMO339G0047 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 1.8e-90 337.4 411 46.5
GSVIVG01010770001 Vitis vinifera HOM05D005431 ORTHO05D006762 8.5e-88 328.6 266 70.3
ClCG02G009850 Citrullus lanatus HOM05D005431 ORTHO05D006762 2.0e-84 317.4 282 64.9
Pp3c5_17010 Physcomitrium patens HOM05D005431 ORTHO05D006762 2.8e-83 313.5 405 48.4
AagrBONN_evm.TU.Sc2ySwM_228.5426 Anthoceros agrestis HOM05D005431 ORTHO05D006762 3.1e-82 310.1 334 51.5
Aqoxy113s003 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.8e-77 294.3 436 43.8
CARHR009190 Cardamine hirsuta HOM05D005431 ORTHO05D006762 7.0e-74 282.3 282 55.0
Mapoly0054s0019 Marchantia polymorpha HOM05D005431 ORTHO05D006762 1.8e-61 241.1 288 49.3
Hund08532 Selenicereus undatus HOM05D005431 ORTHO05D006762 9.7e-60 235.3 363 44.6
CBR_g41665 Chara braunii HOM05D005431 ORTHO05D006762 1.8e-58 231.1 597 33.8
Rhsim03G0115400 Rhododendron simsii HOM05D005431 ORTHO05D006762 3.1e-58 230.3 361 44.9
BcaB03g13279 Brassica carinata HOM05D005431 ORTHO05D006762 5.9e-57 226.1 194 62.4
GSVIVG01010771001 Vitis vinifera HOM05D005431 ORTHO05D006762 1.8e-45 188.0 159 62.3
TPR.G5899 Trifolium pratense HOM05D000002 ORTHO05D000001 2.3e-45 187.6 164 68.3
AagrBONN_evm.TU.Sc2ySwM_117.3064__3065 Anthoceros agrestis HOM05D005431 ORTHO05D006762 3.7e-43 180.3 262 45.0
MBI05_g45098_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 4.1e-42 176.8 181 65.7
Hund08530 Selenicereus undatus HOM05D005431 ORTHO05D006762 8.6e-40 169.1 97 82.5
Cpa.g.sc3384.1 Carica papaya HOM05D005431 ORTHO05D006762 1.5e-39 168.3 102 80.4
MELO3C013491.2 Cucumis melo HOM05D005431 ORTHO05D006762 5.2e-37 159.8 182 57.1
Aqoxy6G02072 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 6.8e-37 159.5 361 33.5
Phvul.004G137800 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 8.9e-37 159.1 97 75.3
TPR.G552 Trifolium pratense HOM05D005431 ORTHO05D006762 1.9e-26 124.8 113 59.3
MBI05_g33993_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 7.8e-25 119.4 100 64.0
Lsat_1_v5_gn_3_133701 Lactuca sativa HOM05D005431 ORTHO05D006762 2.3e-21 107.8 178 44.9
Pp3c25_8310 Physcomitrium patens HOM05D005431 ORTHO05D006762 2.2e-19 101.3 112 49.1
SHI14717 Sapria himalayana HOM05D005431 ORTHO05D006762 3.0e-16 90.9 107 53.3
TPR.G5921 Trifolium pratense HOM05D005431 ORTHO05D006762 5.1e-16 90.1 54 72.2
SHI14712 Sapria himalayana HOM05D000001 ORTHO05D009229 2.5e-15 87.8 49 79.6
AagrBONN_evm.TU.Sc2ySwM_228.2880 Anthoceros agrestis HOM05D005431 ORTHO05D006762 1.2e-14 85.5 92 45.7
C08p12570 Brassica napus HOM05D005431 ORTHO05D006762 2.1e-14 84.7 50 76.0
BolC8t48895H Brassica oleracea HOM05D005431 ORTHO05D006762 2.1e-14 84.7 50 76.0
SMO116G0263 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 1.3e-11 75.5 81 45.7
SGA_v2.0_scaffold612G53193 Striga asiatica HOM05D005431 ORTHO05D006762 6.4e-11 73.2 50 66.0
SHI14714 Sapria himalayana HOM05D005431 ORTHO05D006762 1.9e-10 71.6 52 65.4
CAN.G134.235 Capsicum annuum HOM05D005431 ORTHO05D006762 3.5e-09 67.4 56 58.9
SHI14719 Sapria himalayana HOM05D005431 ORTHO05D006762 1.0e-08 65.9 63 58.7
ClCG02G009830 Citrullus lanatus HOM05D005431 ORTHO05D006762 3.9e-08 63.9 41 70.7
SEGI_17961 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 3.9e-08 63.9 118 35.6
RcHm_v2.0_Chr5g0076741 Rosa chinensis HOM05D005431 ORTHO05D006762 6.6e-08 63.2 60 60.0
Ah.14g086750 Amaranthus hybridus HOM05D005431 ORTHO05D006762 8.7e-08 62.8 43 67.4
Lsat_1_v5_gn_6_94960 Lactuca sativa HOM05D005431 ORTHO05D003355 1.1e-07 62.4 48 64.6


User provided reference genes

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