Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G4974 Papaver somniferum HOM05D003686 ORTHO05D004322 3.9e-87 325.1 208 100.0
PSO801G0146 Papaver somniferum HOM05D003686 ORTHO05D004322 9.1e-84 313.9 208 87.5
Aqoxy2G03146 Aquilegia oxysepala HOM05D003686 ORTHO05D004322 1.1e-49 200.7 203 53.7
TAR362G1277 Trochodendron aralioides HOM05D003686 ORTHO05D004322 3.5e-43 179.1 211 51.2
Gorai.004G053600 Gossypium raimondii HOM05D003686 ORTHO05D004322 6.0e-43 178.3 202 57.4
TAR636G2878 Trochodendron aralioides HOM05D003686 ORTHO05D004322 5.1e-42 175.3 223 50.7
Gohir.A08G043900 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.1e-41 174.1 202 52.5
TAR365G0683 Trochodendron aralioides HOM05D003686 ORTHO05D004322 1.1e-41 174.1 214 50.9
Eucgr.A00286 Eucalyptus grandis HOM05D003686 ORTHO05D004322 1.2e-40 170.6 202 54.5
Gohir.D08G053600 Gossypium hirsutum HOM05D003686 ORTHO05D004322 8.1e-40 167.9 202 56.4
Glyma.10G021900 Glycine max HOM05D003686 ORTHO05D004322 1.4e-39 167.2 209 49.8
Potri.003G058400 Populus trichocarpa HOM05D003686 ORTHO05D004322 2.3e-39 166.4 203 54.2
Nn1g08910 Nelumbo nucifera HOM05D003686 ORTHO05D004322 5.2e-39 165.2 191 52.9
Gohir.D11G123300 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.5e-38 163.7 210 49.5
Gohir.A11G118400 Gossypium hirsutum HOM05D003686 ORTHO05D004322 2.0e-38 163.3 206 62.1
Gorai.007G132200 Gossypium raimondii HOM05D003686 ORTHO05D004322 2.0e-38 163.3 206 61.7
Haze_04804 Corylus avellana HOM05D003686 ORTHO05D004322 3.4e-38 162.5 205 49.8
TWI14G0352 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 5.8e-38 161.8 204 55.9
FAN20G0133 Fragaria x ananassa HOM05D003686 ORTHO05D004322 9.9e-38 161.0 199 53.8
FAN27G0391 Fragaria x ananassa HOM05D003686 ORTHO05D004322 9.9e-38 161.0 199 53.8
COL.COLO4_08036 Corchorus olitorius HOM05D003686 ORTHO05D004322 1.3e-37 160.6 205 55.1
Lalb_Chr06g0163281 Lupinus albus HOM05D003686 ORTHO05D004322 1.7e-37 160.2 211 52.6
Carub.0006s3393 Capsella rubella HOM05D003686 ORTHO05D004322 2.2e-37 159.8 91 81.3
GSVIVG01011011001 Vitis vinifera HOM05D003686 ORTHO05D004322 2.2e-37 159.8 128 64.8
CANSAT78G2257 Cannabis sativa HOM05D003686 ORTHO05D004322 3.7e-37 159.1 213 50.7
Eucgr.B02749 Eucalyptus grandis HOM05D003686 ORTHO05D004322 3.7e-37 159.1 205 62.9
Manes.05G068800 Manihot esculenta HOM05D003686 ORTHO05D004322 3.7e-37 159.1 207 59.4
TWI23G0547 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 3.7e-37 159.1 199 61.3
Glyma.02G152300 Glycine max HOM05D003686 ORTHO05D004322 4.9e-37 158.7 209 55.0
AT4G03120 Arabidopsis thaliana HOM05D003686 ORTHO05D004322 6.4e-37 158.3 125 67.2
CDE11G0890 Ceratophyllum demersum HOM05D003686 ORTHO05D004322 6.4e-37 158.3 132 62.9
Lalb_Chr02g0143061 Lupinus albus HOM05D003686 ORTHO05D004322 8.3e-37 157.9 209 54.5
Os02g0266100 Oryza sativa ssp. japonica HOM05D003686 ORTHO05D004322 1.1e-36 157.5 125 65.6
Sed0010038 Sechium edule HOM05D003686 ORTHO05D004322 1.4e-36 157.1 191 56.5
CiPaw.07G099200 Carya illinoinensis HOM05D003686 ORTHO05D004322 1.9e-36 156.8 200 53.0
FAN15G3346 Fragaria x ananassa HOM05D003686 ORTHO05D004322 4.1e-36 155.6 202 53.0
Manes.01G213100 Manihot esculenta HOM05D003686 ORTHO05D004322 4.1e-36 155.6 200 52.5
Phvul.007G166600 Phaseolus vulgaris HOM05D003686 ORTHO05D004322 5.4e-36 155.2 209 58.9
FvH4_2g24650 Fragaria vesca HOM05D003686 ORTHO05D004322 9.2e-36 154.5 199 52.8
CARHR251560 Cardamine hirsuta HOM05D003686 ORTHO05D004322 1.2e-35 154.1 128 64.8
Atru.chr5.1287 Acer truncatum HOM05D003686 ORTHO05D004322 1.6e-35 153.7 202 54.5
Medtr1g088990 Medicago truncatula HOM05D003686 ORTHO05D004322 1.6e-35 153.7 208 60.6
Duzib133G0241 Durio zibethinus HOM05D003686 ORTHO05D004322 2.7e-35 152.9 206 50.0
BcaB05g23688 Brassica carinata HOM05D003686 ORTHO05D004322 3.5e-35 152.5 128 65.6
BcaB05g23689 Brassica carinata HOM05D003686 ORTHO05D004322 3.5e-35 152.5 128 65.6
TPR.G15798 Trifolium pratense HOM05D003686 ORTHO05D004322 3.5e-35 152.5 204 55.4
Ciclev10022350m.g Citrus clementina HOM05D003686 ORTHO05D004322 4.6e-35 152.1 193 62.7
QL07p015848 Quercus lobata HOM05D003686 ORTHO05D004322 4.6e-35 152.1 201 46.3
Zm00001eb203990 Zea mays HOM05D003686 ORTHO05D004322 4.6e-35 152.1 95 76.8
ATR0706G002 Amborella trichopoda HOM05D003686 ORTHO05D004322 6.0e-35 151.8 209 48.3
Thhalv10028986m.g Eutrema salsugineum HOM05D003686 ORTHO05D004322 6.0e-35 151.8 125 65.6
PGR031G1643 Punica granatum HOM05D003686 ORTHO05D004322 6.0e-35 151.8 132 63.6
Sp6g03160 Schrenkiella parvula HOM05D003686 ORTHO05D004322 6.0e-35 151.8 125 65.6
Thecc.10G102800 Theobroma cacao HOM05D003686 ORTHO05D004322 6.0e-35 151.8 94 77.7
Migut.N00130 Erythranthe guttata HOM05D003686 ORTHO05D004322 7.8e-35 151.4 190 51.6
arahy.Tifrunner.gnm1.ann1.MV1AMG Arachis hypogaea HOM05D003686 ORTHO05D004322 1.0e-34 151.0 209 58.9
CiPaw.08G100800 Carya illinoinensis HOM05D003686 ORTHO05D004322 1.0e-34 151.0 93 78.5
RcHm_v2.0_Chr6g0292481 Rosa chinensis HOM05D003686 ORTHO05D004322 1.0e-34 151.0 203 46.3
CAN.G185.6 Capsicum annuum HOM05D003686 ORTHO05D004322 1.3e-34 150.6 128 64.8
Ca_10377_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 1.3e-34 150.6 198 56.1
Ca_29655_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 1.3e-34 150.6 198 56.1
QL04p005272 Quercus lobata HOM05D003686 ORTHO05D004322 3.9e-34 149.1 204 46.1
MSTRG.21821 Avicennia marina HOM05D003686 ORTHO05D004322 5.1e-34 148.7 130 60.8
ClCG09G006530 Citrullus lanatus HOM05D003686 ORTHO05D004322 6.6e-34 148.3 192 57.8
MD03G1275200 Malus domestica HOM05D003686 ORTHO05D004322 6.6e-34 148.3 134 62.7
QL93p0358_0011 Quercus lobata HOM05D003686 ORTHO05D004322 6.6e-34 148.3 201 50.2
Solyc01g067830.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 6.6e-34 148.3 129 62.0
MELO3C015891.2 Cucumis melo HOM05D003686 ORTHO05D004322 8.6e-34 147.9 93 76.3
Prupe.8G251800 Prunus persica HOM05D003686 ORTHO05D004322 8.6e-34 147.9 121 62.0
THA.LOC104826011 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 1.1e-33 147.5 130 61.5
MD11G1297300 Malus domestica HOM05D003686 ORTHO05D004322 1.5e-33 147.1 208 48.1
PGSC0003DMG400022854 Solanum tuberosum HOM05D003686 ORTHO05D004322 1.9e-33 146.7 95 75.8
Actinidia00703 Actinidia chinensis HOM05D003686 ORTHO05D004322 2.5e-33 146.4 206 52.9
BcaB01g02510 Brassica carinata HOM05D003686 ORTHO05D004322 2.5e-33 146.4 96 72.9
BcaB01g01979 Brassica carinata HOM05D003686 ORTHO05D004322 3.3e-33 146.0 96 72.9
BcaC01g06704 Brassica carinata HOM05D003686 ORTHO05D004322 3.3e-33 146.0 96 72.9
CsaV3_7G028310 Cucumis sativus L. HOM05D003686 ORTHO05D004322 3.3e-33 146.0 193 59.6
Lj1g0025208 Lotus japonicus HOM05D003686 ORTHO05D004322 3.3e-33 146.0 207 46.4
Peaxi162Scf01364g00015 Petunia axillaris HOM05D003686 ORTHO05D004322 4.3e-33 145.6 95 74.7
Duzib138G0197 Durio zibethinus HOM05D003686 ORTHO05D004322 5.6e-33 145.2 205 61.5
Sopen01g029780 Solanum pennellii HOM05D003686 ORTHO05D004322 5.6e-33 145.2 129 61.2
Cpa.g.sc9.157 Carica papaya HOM05D003686 ORTHO05D004322 7.3e-33 144.8 209 52.6
Ca_09109_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 9.5e-33 144.4 127 59.1
Cfa010467 Carpinus fangiana HOM05D003686 ORTHO05D004322 1.6e-32 143.7 125 62.4
A09p02440 Brassica napus HOM05D003686 ORTHO05D004322 2.1e-32 143.3 94 73.4
BraA09t35891Z Brassica rapa HOM05D003686 ORTHO05D004322 2.1e-32 143.3 94 73.4
VMungo0720G0802 Vigna mungo HOM05D003686 ORTHO05D004322 2.1e-32 143.3 218 48.2
BolC3t16013H Brassica oleracea HOM05D003686 ORTHO05D004322 2.8e-32 142.9 99 69.7
A03p30600 Brassica napus HOM05D003686 ORTHO05D004322 3.6e-32 142.5 204 56.9
DCAR_007018 Daucus carota HOM05D003686 ORTHO05D004322 3.6e-32 142.5 197 46.7
Mapoly0103s0046 Marchantia polymorpha HOM05D003686 ORTHO05D004322 3.6e-32 142.5 130 60.0
Sc25g0004660 Simmondsia chinensis HOM05D003686 ORTHO05D004322 3.6e-32 142.5 94 75.5
Medtr7g107640 Medicago truncatula HOM05D003686 ORTHO05D004322 4.7e-32 142.1 125 60.0
Sed0008045 Sechium edule HOM05D003686 ORTHO05D004322 4.7e-32 142.1 91 75.8
Psat3g024960 Pisum sativum HOM05D003686 ORTHO05D004322 6.2e-32 141.7 128 59.4
BolC9t53184H Brassica oleracea HOM05D003686 ORTHO05D004322 8.1e-32 141.4 94 72.3
Lj5g0005016 Lotus japonicus HOM05D003686 ORTHO05D004322 8.1e-32 141.4 226 50.0
C03p37160 Brassica napus HOM05D003686 ORTHO05D004322 1.4e-31 140.6 145 64.1
BraA03t12240Z Brassica rapa HOM05D003686 ORTHO05D004322 1.2e-30 137.5 202 56.4
Dinv11293 Davidia involucrata HOM05D003686 ORTHO05D004322 1.5e-30 137.1 215 42.8
ECA248G2178 Erigeron canadensis HOM05D003686 ORTHO05D004322 2.0e-30 136.7 127 58.3
Nn2g12370 Nelumbo nucifera HOM05D003686 ORTHO05D004322 2.0e-30 136.7 197 47.2
Dinv11297 Davidia involucrata HOM05D003686 ORTHO05D004322 3.4e-30 136.0 215 42.8
PSO384G1591 Papaver somniferum HOM05D000185 ORTHO05D000105 3.4e-30 136.0 195 46.2
Lsat_1_v5_gn_5_188760 Lactuca sativa HOM05D003686 ORTHO05D004322 5.8e-30 135.2 210 50.0
THA.LOC104817532 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 9.9e-30 134.4 125 55.2
AUR62025901 Chenopodium quinoa HOM05D003686 ORTHO05D004322 1.3e-29 134.0 126 61.9
AUR62025902 Chenopodium quinoa HOM05D003686 ORTHO05D004322 1.3e-29 134.0 126 61.9
Mapoly0087s0074 Marchantia polymorpha HOM05D003686 ORTHO05D004322 1.7e-29 133.7 137 57.7
BraA02t07500Z Brassica rapa HOM05D003686 ORTHO05D004322 2.9e-29 132.9 128 60.9
PSO384G1636 Papaver somniferum HOM05D000185 ORTHO05D000105 2.9e-29 132.9 195 45.6
Solyc06g008860.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 3.8e-29 132.5 205 43.9
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 3.8e-29 132.5 227 48.5
HanXRQChr11g0330151 Helianthus annuus HOM05D003686 ORTHO05D004322 4.9e-29 132.1 128 64.1
CAN.G1006.23 Capsicum annuum HOM05D003686 ORTHO05D004322 8.4e-29 131.3 122 60.7
vmacro17192 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 8.4e-29 131.3 211 42.2
HanXRQChr01g0002781 Helianthus annuus HOM05D003686 ORTHO05D004322 1.4e-28 130.6 129 65.1
Hma1.2p1_0643F.1_g194700 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 1.4e-28 130.6 123 60.2
Hma1.2p1_0643F.1_g194711 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 1.4e-28 130.6 123 60.2
Hma1.2p1_0643F.1_g194695 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 1.9e-28 130.2 92 70.7
Hma1.2p1_0643F.1_g194710 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 1.9e-28 130.2 92 70.7
arahy.Tifrunner.gnm1.ann1.TAZ1K7 Arachis hypogaea HOM05D003686 ORTHO05D004322 3.2e-28 129.4 242 49.6
Sopen06g003610 Solanum pennellii HOM05D003686 ORTHO05D004322 3.2e-28 129.4 204 43.1
BolC2t10013H Brassica oleracea HOM05D003686 ORTHO05D004322 5.4e-28 128.6 129 59.7
DCAR_012430 Daucus carota HOM05D003686 ORTHO05D004322 5.4e-28 128.6 188 45.7
Migut.N02118 Erythranthe guttata HOM05D003686 ORTHO05D004322 5.4e-28 128.6 122 59.8
Migut.O00643 Erythranthe guttata HOM05D003686 ORTHO05D004322 5.4e-28 128.6 122 59.8
Rhsim13G0017700 Rhododendron simsii HOM05D003686 ORTHO05D004322 7.1e-28 128.3 221 41.6
AUR62029649 Chenopodium quinoa HOM05D003686 ORTHO05D004322 9.2e-28 127.9 199 50.3
Pp3c12_26180 Physcomitrium patens HOM05D003686 ORTHO05D004322 1.2e-27 127.5 128 57.0
BcaC03g16209 Brassica carinata HOM05D003686 ORTHO05D004322 2.1e-27 126.7 126 59.5
CSS0048633 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 2.1e-27 126.7 127 56.7
Ah.12g061550 Amaranthus hybridus HOM05D003686 ORTHO05D004322 3.5e-27 125.9 222 51.8
Nitab4.5_0004238g0080 Nicotiana tabacum HOM05D003686 ORTHO05D004322 3.5e-27 125.9 123 62.6
A02p25120 Brassica napus HOM05D003686 ORTHO05D004322 4.6e-27 125.6 138 56.5
Pp3c4_170 Physcomitrium patens HOM05D003686 ORTHO05D004322 4.6e-27 125.6 113 61.1
PGSC0003DMG400021997 Solanum tuberosum HOM05D003686 ORTHO05D004322 4.6e-27 125.6 214 41.1
COL.COLO4_34092 Corchorus olitorius HOM05D003686 ORTHO05D004322 6.0e-27 125.2 96 67.7
SGA_v2.0_scaffold36G14363 Striga asiatica HOM05D003686 ORTHO05D004322 6.0e-27 125.2 129 56.6
AagrBONN_evm.TU.Sc2ySwM_228.930 Anthoceros agrestis HOM05D003686 ORTHO05D004322 7.8e-27 124.8 75 77.3
Oeu022800.1 Olea europaea HOM05D003686 ORTHO05D004322 7.8e-27 124.8 94 69.1
Oeu022802.1 Olea europaea HOM05D003686 ORTHO05D004322 7.8e-27 124.8 94 69.1
ECA247G2101 Erigeron canadensis HOM05D003686 ORTHO05D004322 1.7e-26 123.6 237 50.6
Nitab4.5_0000295g0050 Nicotiana tabacum HOM05D003686 ORTHO05D004322 5.1e-26 122.1 206 42.7
EL10Ac2g03326 Beta vulgaris HOM05D003686 ORTHO05D004322 6.6e-26 121.7 221 41.2
unitig_61.g26148 Utricularia gibba HOM05D003686 ORTHO05D004322 1.1e-25 120.9 134 51.5
MSTRG.12592 Avicennia marina HOM05D003686 ORTHO05D004322 1.5e-25 120.6 89 68.5
Cc01_g20160 Coffea canephora HOM05D003686 ORTHO05D004322 1.5e-25 120.6 215 38.6
FAN20G1534 Fragaria x ananassa HOM05D003686 ORTHO05D004322 1.5e-25 120.6 182 49.5
SGA_v2.0_scaffold89G27564 Striga asiatica HOM05D003686 ORTHO05D004322 2.5e-25 119.8 233 47.2
SalBow8G5349 Salvia bowleyana HOM05D003686 ORTHO05D004322 3.3e-25 119.4 89 66.3
Sabra03G0032800 Salix brachista HOM05D003686 ORTHO05D004322 4.3e-25 119.0 185 43.2
SGA_v2.0_scaffold172G39059 Striga asiatica HOM05D003686 ORTHO05D004322 5.6e-25 118.6 216 43.5
SalBow6G6913 Salvia bowleyana HOM05D003686 ORTHO05D004322 9.6e-25 117.9 155 49.7
Lj3A810T51 Lonicera japonica HOM05D003686 ORTHO05D004322 3.6e-24 115.9 80 71.2
FAN24G2968 Fragaria x ananassa HOM05D003686 ORTHO05D004322 1.8e-23 113.6 182 45.6
Nitab4.5_0001149g0030 Nicotiana tabacum HOM05D003686 ORTHO05D004322 1.8e-23 113.6 128 56.2
Psat3g182400 Pisum sativum HOM05D003686 ORTHO05D004322 5.3e-23 112.1 59 83.1
Psat6g168000 Pisum sativum HOM05D003686 ORTHO05D004322 6.9e-23 111.7 196 45.9
HPP92_021468 Vanilla planifolia HOM05D003686 ORTHO05D004322 1.2e-22 110.9 95 58.9
Nitab4.5_0001624g0040 Nicotiana tabacum HOM05D003686 ORTHO05D004322 2.0e-22 110.2 187 44.9
Psat0s3642g0040 Pisum sativum HOM05D000068 ORTHO05D025728 3.4e-22 109.4 59 84.7
HPP92_021461 Vanilla planifolia HOM05D003686 ORTHO05D004322 5.8e-22 108.6 112 55.4
C09p02540 Brassica napus HOM05D003686 ORTHO05D004322 4.9e-21 105.5 79 67.1
Hund24902 Selenicereus undatus HOM05D003686 ORTHO05D004322 7.1e-20 101.7 121 52.1
unitig_22.g6331 Utricularia gibba HOM05D003686 ORTHO05D004322 1.3e-18 97.4 128 45.3
CSS0007511 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 2.3e-18 96.7 110 53.6
CSS0037271 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 2.3e-18 96.7 110 53.6
vmacro02511 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 5.1e-18 95.5 77 63.6
PSO384G1563 Papaver somniferum HOM05D003686 ORTHO05D004322 4.3e-17 92.4 160 41.2
Lj2P1184T34 Lonicera japonica HOM05D003686 ORTHO05D004322 1.6e-16 90.5 191 39.3
PSO384G1681 Papaver somniferum HOM05D003686 ORTHO05D004322 3.6e-16 89.4 74 62.2
Peaxi162Scf00936g00218 Petunia axillaris HOM05D003686 ORTHO05D004322 4.0e-15 85.9 113 51.3
Cre09.g401300 Chlamydomonas reinhardtii HOM05D003686 ORTHO05D004322 2.6e-14 83.2 43 83.7
Peaxi162Scf01067g00002 Petunia axillaris HOM05D003686 ORTHO05D004322 5.8e-14 82.0 98 52.0
Duzib211G0369 Durio zibethinus HOM05D003686 ORTHO05D004322 1.9e-12 77.0 64 65.6
Lj5g0025755 Lotus japonicus HOM05D003686 ORTHO05D009933 1.9e-09 67.0 59 59.3
PRCOL_00005459 Prasinoderma coloniale HOM05D003686 ORTHO05D004322 6.2e-08 62.0 95 43.2
vmacro14957 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 1.1e-07 61.2 63 55.6
vmacro14959 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 9.0e-07 58.2 201 30.8


User provided reference genes

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