Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu051845.1 Olea europaea HOM05D005431 ORTHO05D006762 1.5e-278 962.2 498 100.0
Lj1A1139T47 Lonicera japonica HOM05D005431 ORTHO05D006762 4.0e-162 575.5 475 65.9
Dinv18088 Davidia involucrata HOM05D005431 ORTHO05D006762 6.8e-162 574.7 472 67.2
MSTRG.16956 Avicennia marina HOM05D005431 ORTHO05D006762 3.4e-161 572.4 442 69.0
Thecc.05G259000 Theobroma cacao HOM05D005431 ORTHO05D006762 2.2e-160 569.7 446 70.4
COL.COLO4_08630 Corchorus olitorius HOM05D005431 ORTHO05D006762 1.1e-159 567.4 479 67.0
CSS0010563 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 4.2e-159 565.5 438 71.9
SalBow1G3497 Salvia bowleyana HOM05D005431 ORTHO05D006762 6.6e-157 558.1 461 68.3
Manes.08G148100 Manihot esculenta HOM05D005431 ORTHO05D006762 8.7e-157 557.8 452 67.0
GSVIVG01020933001 Vitis vinifera HOM05D005431 ORTHO05D006762 9.6e-156 554.3 450 69.3
TAR633G0900 Trochodendron aralioides HOM05D005431 ORTHO05D006762 1.3e-155 553.9 482 64.3
TWI32G0483 Tripterygium wilfordii HOM05D005431 ORTHO05D006762 2.1e-155 553.1 441 67.1
Sc24g0002060 Simmondsia chinensis HOM05D005431 ORTHO05D006762 6.2e-155 551.6 440 68.6
Gohir.A11G240400 Gossypium hirsutum HOM05D005431 ORTHO05D006762 2.4e-154 549.7 447 68.0
QL07p020652 Quercus lobata HOM05D005431 ORTHO05D006762 4.0e-154 548.9 448 68.1
Lsat_1_v5_gn_6_37921 Lactuca sativa HOM05D005431 ORTHO05D006762 5.3e-154 548.5 438 65.5
ECA233G5562 Erigeron canadensis HOM05D005431 ORTHO05D006762 6.9e-154 548.1 444 66.4
HanXRQChr02g0054501 Helianthus annuus HOM05D005431 ORTHO05D006762 3.4e-153 545.8 477 63.3
Prupe.6G097200 Prunus persica HOM05D005431 ORTHO05D006762 2.9e-152 542.7 442 67.2
Gorai.007G267600 Gossypium raimondii HOM05D005431 ORTHO05D006762 4.9e-152 542.0 447 67.8
Gohir.D11G249800 Gossypium hirsutum HOM05D005431 ORTHO05D006762 6.4e-152 541.6 447 67.6
Rhsim06G0113900 Rhododendron simsii HOM05D005431 ORTHO05D006762 1.9e-151 540.0 482 63.7
CiPaw.10G000400 Carya illinoinensis HOM05D005431 ORTHO05D006762 2.4e-151 539.7 448 67.9
MD03G1112900 Malus domestica HOM05D005431 ORTHO05D006762 9.3e-151 537.7 458 66.4
Potri.013G054300 Populus trichocarpa HOM05D005431 ORTHO05D006762 1.2e-150 537.3 454 65.9
Aqoxy2G02389 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 3.5e-150 535.8 469 64.2
Duzib177G0804 Durio zibethinus HOM05D005431 ORTHO05D006762 4.6e-150 535.4 448 66.3
Eucgr.A02076 Eucalyptus grandis HOM05D005431 ORTHO05D006762 3.0e-149 532.7 456 64.0
CSS0005177 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 3.9e-149 532.3 438 68.7
Peaxi162Scf00362g01188 Petunia axillaris HOM05D005431 ORTHO05D006762 6.6e-149 531.6 434 66.4
Aqoxy6G02574 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.1e-148 530.8 468 63.9
Ciclev10020067m.g Citrus clementina HOM05D005431 ORTHO05D006762 5.6e-148 528.5 451 65.0
Cc10_g14020 Coffea canephora HOM05D005431 ORTHO05D006762 5.6e-148 528.5 461 62.9
SGA_v2.0_scaffold32G13347 Striga asiatica HOM05D005431 ORTHO05D006762 7.3e-148 528.1 463 64.4
Lalb_Chr14g0364381 Lupinus albus HOM05D005431 ORTHO05D006762 9.6e-148 527.7 442 65.6
PSO339G6142 Papaver somniferum HOM05D005431 ORTHO05D006762 1.1e-146 524.2 457 64.8
Sabra13G0049000 Salix brachista HOM05D005431 ORTHO05D006762 1.4e-146 523.9 452 65.0
Lj1g0019204 Lotus japonicus HOM05D005431 ORTHO05D006762 3.1e-146 522.7 434 65.0
PSO384G4368 Papaver somniferum HOM05D005431 ORTHO05D006762 4.5e-145 518.8 454 65.4
AUR62035802 Chenopodium quinoa HOM05D005431 ORTHO05D006762 2.2e-144 516.5 448 64.7
Atru.chr2.1265 Acer truncatum HOM05D005431 ORTHO05D006762 4.9e-144 515.4 461 63.8
Glyma.16G042800 Glycine max HOM05D005431 ORTHO05D006762 6.4e-144 515.0 436 63.5
MBI13_g30325_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 6.4e-144 515.0 440 66.4
PGR042G1130 Punica granatum HOM05D005431 ORTHO05D006762 6.4e-144 515.0 446 63.9
arahy.Tifrunner.gnm1.ann1.UBW8VJ Arachis hypogaea HOM05D005431 ORTHO05D006762 8.4e-144 514.6 450 62.4
Solyc01g110820.4 Solanum lycopersicum HOM05D005431 ORTHO05D006762 8.4e-144 514.6 444 63.7
Ca_08254_v3 Cicer arietinum L. HOM05D005431 ORTHO05D006762 1.4e-143 513.8 438 64.8
PGSC0003DMG400001606 Solanum tuberosum HOM05D005431 ORTHO05D006762 5.5e-143 511.9 452 63.5
Medtr7g085290 Medicago truncatula HOM05D005431 ORTHO05D006762 2.7e-142 509.6 439 64.2
Glyma.19G109200 Glycine max HOM05D005431 ORTHO05D006762 6.0e-142 508.4 435 64.4
Phvul.001G100700 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 6.7e-141 505.0 438 62.6
Sopen01g052890 Solanum pennellii HOM05D005431 ORTHO05D006762 4.3e-140 502.3 444 62.4
CANSAT78G0764 Cannabis sativa HOM05D005431 ORTHO05D006762 9.6e-140 501.1 443 64.1
HPP92_006679 Vanilla planifolia HOM05D005431 ORTHO05D006762 6.2e-139 498.4 441 62.6
FvH4_3g32950 Fragaria vesca HOM05D005431 ORTHO05D006762 1.4e-138 497.3 447 63.5
Nitab4.5_0001364g0090 Nicotiana tabacum HOM05D005431 ORTHO05D006762 1.2e-137 494.2 424 64.9
Os03g0326600 Oryza sativa ssp. japonica HOM05D005431 ORTHO05D006762 2.6e-137 493.0 437 62.0
CDE02G0906 Ceratophyllum demersum HOM05D005431 ORTHO05D006762 5.8e-137 491.9 453 62.0
RcHm_v2.0_Chr5g0060221 Rosa chinensis HOM05D005431 ORTHO05D006762 1.0e-136 491.1 449 61.5
FAN16G2474 Fragaria x ananassa HOM05D005431 ORTHO05D006762 3.8e-136 489.2 443 61.4
Cfa016425 Carpinus fangiana HOM05D005431 ORTHO05D006762 5.5e-135 485.3 458 62.0
AT1G09230 Arabidopsis thaliana HOM05D005431 ORTHO05D006762 1.2e-134 484.2 443 57.3
FAN11G0735 Fragaria x ananassa HOM05D005431 ORTHO05D006762 2.1e-134 483.4 440 63.0
BolC5t29482H Brassica oleracea HOM05D005431 ORTHO05D006762 6.0e-134 481.9 471 55.2
Zm00001eb015560 Zea mays HOM05D005431 ORTHO05D006762 1.3e-133 480.7 434 59.0
BraA06t23807Z Brassica rapa HOM05D005431 ORTHO05D006762 5.1e-133 478.8 471 56.5
THA.LOC104805792 Tarenaya hassleriana HOM05D005431 ORTHO05D006762 6.7e-133 478.4 442 60.9
Sp1g07840 Schrenkiella parvula HOM05D005431 ORTHO05D006762 8.7e-133 478.0 460 57.0
C05p07240 Brassica napus HOM05D005431 ORTHO05D006762 1.3e-131 474.2 461 55.3
Psat3g089720 Pisum sativum HOM05D005431 ORTHO05D006762 6.3e-131 471.9 441 60.1
Thhalv10007645m.g Eutrema salsugineum HOM05D005431 ORTHO05D006762 1.8e-130 470.3 448 56.7
Haze_19398 Corylus avellana HOM05D005431 ORTHO05D006762 2.4e-130 469.9 446 62.3
VMungo1383G2520 Vigna mungo HOM05D005431 ORTHO05D006762 3.1e-130 469.5 463 57.2
TPR.G5901 Trifolium pratense HOM05D005431 ORTHO05D006762 3.4e-129 466.1 479 56.2
ATR0782G102 Amborella trichopoda HOM05D005431 ORTHO05D006762 1.3e-128 464.2 457 60.2
Duzib128G1128 Durio zibethinus HOM05D005431 ORTHO05D006762 8.4e-128 461.5 444 61.0
Nn7g35775 Nelumbo nucifera HOM05D005431 ORTHO05D006762 1.9e-127 460.3 459 57.5
A06p05970 Brassica napus HOM05D005431 ORTHO05D006762 2.5e-127 459.9 465 54.6
vmacro12472 Vaccinium macrocarpon HOM05D005431 ORTHO05D006762 1.2e-126 457.6 624 50.0
Carub.0001s0857 Capsella rubella HOM05D005431 ORTHO05D006762 2.7e-126 456.4 437 55.1
BcaC05g24779 Brassica carinata HOM05D005431 ORTHO05D006762 1.5e-124 450.7 469 52.9
AL1G19720 Arabidopsis lyrata HOM05D005431 ORTHO05D006762 1.6e-123 447.2 443 54.0
Actinidia02566 Actinidia chinensis HOM05D005431 ORTHO05D006762 1.0e-120 438.0 338 70.4
Migut.C00530 Erythranthe guttata HOM05D005431 ORTHO05D006762 5.0e-120 435.6 320 70.6
Aa31LG1G5950 Aethionema arabicum HOM05D005431 ORTHO05D006762 1.6e-118 430.6 469 52.9
Cfa011866 Carpinus fangiana HOM05D005431 ORTHO05D006762 9.1e-114 414.8 378 63.8
arahy.Tifrunner.gnm1.ann1.H79Q9S Arachis hypogaea HOM05D005431 ORTHO05D006762 1.0e-112 411.4 455 53.8
Sed0005030 Sechium edule HOM05D005431 ORTHO05D006762 3.2e-111 406.4 334 65.3
Haze_21236 Corylus avellana HOM05D005431 ORTHO05D006762 3.6e-110 402.9 381 61.9
EL10Ac8g19795 Beta vulgaris HOM05D005431 ORTHO05D006762 1.4e-109 401.0 343 65.0
SEGI_41626 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 1.1e-106 391.3 441 51.9
AUR62027554 Chenopodium quinoa HOM05D005431 ORTHO05D006762 9.1e-106 388.3 398 53.8
Cpa.g.sc594.2 Carica papaya HOM05D005431 ORTHO05D006762 4.7e-102 375.9 368 62.5
CsaV3_6G010080 Cucumis sativus L. HOM05D005431 ORTHO05D006762 7.7e-97 358.6 317 64.4
Potri.019G031700 Populus trichocarpa HOM05D005431 ORTHO05D006762 1.7e-96 357.5 322 64.9
arahy.Tifrunner.gnm1.ann1.M3GFZ7 Arachis hypogaea HOM05D005431 ORTHO05D006762 1.4e-90 337.8 393 53.2
GSVIVG01010770001 Vitis vinifera HOM05D005431 ORTHO05D006762 4.0e-85 319.7 265 72.1
SMO339G0047 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 5.2e-85 319.3 397 48.1
Pp3c5_17010 Physcomitrium patens HOM05D005431 ORTHO05D006762 9.2e-82 308.5 404 48.3
AagrBONN_evm.TU.Sc2ySwM_228.5426 Anthoceros agrestis HOM05D005431 ORTHO05D006762 1.0e-80 305.1 321 51.1
ClCG02G009850 Citrullus lanatus HOM05D005431 ORTHO05D006762 2.1e-78 297.4 298 59.7
CARHR009190 Cardamine hirsuta HOM05D005431 ORTHO05D006762 3.2e-74 283.5 276 56.9
Aqoxy113s003 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 2.0e-65 254.2 436 41.5
Mapoly0054s0019 Marchantia polymorpha HOM05D005431 ORTHO05D006762 1.3e-59 235.0 287 48.8
Hund08532 Selenicereus undatus HOM05D005431 ORTHO05D006762 3.7e-59 233.4 363 44.4
BcaB03g13279 Brassica carinata HOM05D005431 ORTHO05D006762 2.5e-55 220.7 201 57.7
Rhsim03G0115400 Rhododendron simsii HOM05D005431 ORTHO05D006762 8.1e-54 215.7 334 45.2
CBR_g41665 Chara braunii HOM05D005431 ORTHO05D006762 1.1e-53 215.3 590 31.2
AagrBONN_evm.TU.Sc2ySwM_117.3064__3065 Anthoceros agrestis HOM05D005431 ORTHO05D006762 8.1e-46 189.1 259 49.4
Hund08530 Selenicereus undatus HOM05D005431 ORTHO05D006762 9.6e-39 165.6 97 78.4
Cpa.g.sc3384.1 Carica papaya HOM05D005431 ORTHO05D006762 1.3e-38 165.2 101 79.2
Phvul.004G137800 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 2.8e-38 164.1 97 77.3
GSVIVG01010771001 Vitis vinifera HOM05D005431 ORTHO05D006762 4.5e-36 156.8 147 57.8
TPR.G5899 Trifolium pratense HOM05D000002 ORTHO05D000001 3.9e-32 143.7 109 75.2
MELO3C013491.2 Cucumis melo HOM05D005431 ORTHO05D006762 6.2e-30 136.3 180 50.0
MBI05_g45098_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 1.4e-29 135.2 178 56.2
Lsat_1_v5_gn_3_133701 Lactuca sativa HOM05D005431 ORTHO05D006762 4.2e-26 123.6 133 55.6
TPR.G552 Trifolium pratense HOM05D005431 ORTHO05D006762 5.5e-26 123.2 105 62.9
Aqoxy6G02072 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.5e-23 115.2 345 30.4
MBI05_g33993_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 1.3e-22 112.1 99 55.6
Pp3c25_8310 Physcomitrium patens HOM05D005431 ORTHO05D006762 3.8e-19 100.5 112 47.3
TPR.G5921 Trifolium pratense HOM05D005431 ORTHO05D006762 1.0e-16 92.4 54 74.1
SHI14717 Sapria himalayana HOM05D005431 ORTHO05D006762 7.4e-15 86.3 113 45.1
SHI14712 Sapria himalayana HOM05D000001 ORTHO05D009229 9.6e-15 85.9 49 75.5
AagrBONN_evm.TU.Sc2ySwM_228.2880 Anthoceros agrestis HOM05D005431 ORTHO05D006762 6.3e-14 83.2 92 44.6
C08p12570 Brassica napus HOM05D005431 ORTHO05D006762 9.0e-13 79.3 52 69.2
BolC8t48895H Brassica oleracea HOM05D005431 ORTHO05D006762 9.0e-13 79.3 52 69.2
SHI14714 Sapria himalayana HOM05D005431 ORTHO05D006762 1.0e-11 75.9 52 69.2
SGA_v2.0_scaffold612G53193 Striga asiatica HOM05D005431 ORTHO05D006762 1.0e-11 75.9 49 69.4
SMO116G0263 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 1.7e-11 75.1 83 44.6
CAN.G134.235 Capsicum annuum HOM05D005431 ORTHO05D006762 7.2e-10 69.7 56 58.9
SHI14719 Sapria himalayana HOM05D005431 ORTHO05D006762 5.1e-08 63.5 33 87.9
ClCG02G009830 Citrullus lanatus HOM05D005431 ORTHO05D006762 6.7e-08 63.2 41 78.0
Oeu015528.1 Olea europaea HOM05D005431 ORTHO05D006762 6.7e-08 63.2 31 93.5
Ah.14g086750 Amaranthus hybridus HOM05D005431 ORTHO05D006762 1.9e-07 61.6 39 76.9
Lsat_1_v5_gn_6_94960 Lactuca sativa HOM05D005431 ORTHO05D003355 7.4e-07 59.7 40 67.5
SEGI_17961 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 1.3e-06 58.9 120 35.8
RcHm_v2.0_Chr5g0076741 Rosa chinensis HOM05D005431 ORTHO05D006762 1.6e-06 58.5 36 75.0
Lsat_1_v5_gn_5_27580 Lactuca sativa HOM05D005974 ORTHO05D007201 4.8e-06 57.0 59 52.5


User provided reference genes

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