Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu044421.3 Olea europaea HOM05D003850 ORTHO05D004515 0.0e+00 1489.9 831 100.0
Oeu002760.2 Olea europaea HOM05D003850 ORTHO05D004515 3.4e-190 669.5 832 55.6
MSTRG.7170 Avicennia marina HOM05D003850 ORTHO05D004515 4.6e-163 579.3 832 48.4
CSS0032808 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 2.6e-158 563.5 838 47.6
Migut.M01390 Erythranthe guttata HOM05D003850 ORTHO05D004515 5.9e-158 562.4 831 46.6
SalBow8G5272 Salvia bowleyana HOM05D003850 ORTHO05D004515 2.4e-151 540.4 842 46.7
Cc09_g00920 Coffea canephora HOM05D003850 ORTHO05D004515 1.2e-150 538.1 834 47.8
QL05p069776 Quercus lobata HOM05D003850 ORTHO05D004515 7.7e-150 535.4 838 45.7
SGA_v2.0_scaffold4G01878 Striga asiatica HOM05D003850 ORTHO05D004515 5.5e-148 529.3 801 47.8
Sopen11g006940 Solanum pennellii HOM05D003850 ORTHO05D004515 3.3e-145 520.0 835 44.7
Nn1g03331 Nelumbo nucifera HOM05D003850 ORTHO05D004515 1.3e-144 518.1 839 45.3
CSS0007684 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 2.2e-144 517.3 848 45.3
TAR624G0821 Trochodendron aralioides HOM05D003850 ORTHO05D004515 2.2e-144 517.3 838 45.3
Nitab4.5_0001198g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 7.0e-143 512.3 825 44.5
CANSAT56G0590 Cannabis sativa HOM05D003850 ORTHO05D004515 1.6e-142 511.1 837 44.1
Aqoxy1G04110 Aquilegia oxysepala HOM05D003850 ORTHO05D004515 7.7e-142 508.8 839 43.1
Actinidia39269 Actinidia chinensis HOM05D003850 ORTHO05D004515 1.3e-141 508.1 321 81.3
Duzib160G0220 Durio zibethinus HOM05D003850 ORTHO05D004515 7.2e-140 502.3 865 44.0
Ciclev10014841m.g Citrus clementina HOM05D003850 ORTHO05D004515 1.4e-138 498.0 838 43.4
Nitab4.5_0000143g0310 Nicotiana tabacum HOM05D003850 ORTHO05D004515 1.2e-137 495.0 320 81.6
Nn1g07354 Nelumbo nucifera HOM05D003850 ORTHO05D004515 2.0e-137 494.2 836 44.6
Atru.chr1.2461 Acer truncatum HOM05D003850 ORTHO05D004515 1.1e-135 488.4 840 42.5
Potri.006G009100 Populus trichocarpa HOM05D003850 ORTHO05D004515 1.1e-135 488.4 835 43.5
CiPaw.09G102000 Carya illinoinensis HOM05D003850 ORTHO05D004515 7.7e-134 482.3 840 42.1
Eucgr.E03951 Eucalyptus grandis HOM05D003850 ORTHO05D004515 1.7e-133 481.1 842 42.0
PSO302G0165 Papaver somniferum HOM05D003850 ORTHO05D004515 2.9e-133 480.3 321 80.4
PSO210G4264 Papaver somniferum HOM05D003850 ORTHO05D004515 8.5e-133 478.8 843 44.6
RhsimUnG0025700 Rhododendron simsii HOM05D003850 ORTHO05D004515 1.5e-132 478.0 883 42.4
RhsimUnG0028500 Rhododendron simsii HOM05D003850 ORTHO05D004515 1.5e-132 478.0 883 42.4
unitig_748.g7103 Utricularia gibba HOM05D003850 ORTHO05D004515 1.6e-131 474.6 829 44.8
Manes.07G088900 Manihot esculenta HOM05D003850 ORTHO05D004515 2.1e-131 474.2 832 45.2
Thecc.06G232700 Theobroma cacao HOM05D003850 ORTHO05D004515 2.1e-131 474.2 864 42.7
arahy.Tifrunner.gnm1.ann1.C17RPB Arachis hypogaea HOM05D003850 ORTHO05D004515 3.6e-131 473.4 838 42.1
TAR629G2665 Trochodendron aralioides HOM05D003850 ORTHO05D004515 3.6e-131 473.4 835 42.3
Glyma.09G009900 Glycine max HOM05D003850 ORTHO05D004515 8.0e-131 472.2 838 43.0
Glyma.15G114200 Glycine max HOM05D003850 ORTHO05D004515 5.2e-130 469.5 321 75.7
Ca_00718_v3 Cicer arietinum L. HOM05D003850 ORTHO05D004515 2.0e-129 467.6 838 41.5
Lalb_Chr20g0119201 Lupinus albus HOM05D003850 ORTHO05D004515 4.4e-129 466.5 841 44.1
GSVIVG01003352001 Vitis vinifera HOM05D003850 ORTHO05D004515 4.4e-129 466.5 838 43.9
Sed0003006 Sechium edule HOM05D003850 ORTHO05D004515 1.3e-128 464.9 838 42.1
THA.LOC104812992 Tarenaya hassleriana HOM05D003850 ORTHO05D004515 1.7e-128 464.5 844 40.9
vmacro15772 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 2.8e-128 463.8 848 45.3
arahy.Tifrunner.gnm1.ann1.IIR6TV Arachis hypogaea HOM05D003850 ORTHO05D004515 4.8e-128 463.0 840 41.5
Prupe.4G011300 Prunus persica HOM05D003850 ORTHO05D004515 1.8e-127 461.1 842 43.5
Gohir.A06G153120 Gossypium hirsutum HOM05D003850 ORTHO05D004515 5.4e-127 459.5 321 79.8
VMungo1215G3075 Vigna mungo HOM05D003850 ORTHO05D004515 5.4e-127 459.5 839 42.6
Gorai.010G186300 Gossypium raimondii HOM05D003850 ORTHO05D004515 2.7e-126 457.2 321 79.4
Phvul.006G143600 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 4.5e-126 456.4 840 41.5
Solyc11g012150.3 Solanum lycopersicum HOM05D003850 ORTHO05D004515 7.7e-126 455.7 798 42.7
PGSC0003DMG400013344 Solanum tuberosum HOM05D003850 ORTHO05D004515 8.6e-125 452.2 799 42.8
Potri.016G015100 Populus trichocarpa HOM05D003850 ORTHO05D004515 1.1e-124 451.8 836 44.0
Gohir.D06G159600 Gossypium hirsutum HOM05D003850 ORTHO05D004515 4.2e-124 449.9 321 78.8
MBI16_g42266_MAGBIO Magnolia biondii HOM05D003850 ORTHO05D004515 1.2e-123 448.4 321 74.8
PGR102G0753 Punica granatum HOM05D003850 ORTHO05D004515 1.4e-122 444.9 838 41.6
COL.COLO4_31876 Corchorus olitorius HOM05D003850 ORTHO05D004515 2.3e-122 444.1 321 76.9
VMungo0540G1287 Vigna mungo HOM05D003850 ORTHO05D004515 6.8e-122 442.6 840 41.1
CsaV3_3G028740 Cucumis sativus L. HOM05D003850 ORTHO05D004515 2.0e-121 441.0 838 41.9
Peaxi162Scf00558g00516 Petunia axillaris HOM05D003850 ORTHO05D004515 3.4e-121 440.3 777 43.1
Lj2A262G45 Lonicera japonica HOM05D003850 ORTHO05D004515 4.9e-120 436.4 322 75.2
vmacro03646 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 6.3e-120 436.0 347 66.0
ECA233G3046 Erigeron canadensis HOM05D003850 ORTHO05D004515 8.3e-120 435.6 843 41.5
arahy.Tifrunner.gnm1.ann1.97WSNQ Arachis hypogaea HOM05D003850 ORTHO05D004515 3.1e-119 433.7 852 41.5
CiPaw.10G077600 Carya illinoinensis HOM05D003850 ORTHO05D004515 1.2e-118 431.8 786 39.4
TPR.G3343 Trifolium pratense HOM05D003850 ORTHO05D004515 2.3e-117 427.6 838 40.6
RhsimUnG0109100 Rhododendron simsii HOM05D003850 ORTHO05D004515 2.9e-117 427.2 330 74.2
Sabra06G0006900 Salix brachista HOM05D003850 ORTHO05D004515 2.9e-117 427.2 839 39.8
ATR0751G086 Amborella trichopoda HOM05D003850 ORTHO05D004515 1.1e-116 425.2 850 40.5
Aa31LG9G10040 Aethionema arabicum HOM05D003850 ORTHO05D004515 4.3e-116 423.3 859 43.3
Phvul.003G083500 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 4.3e-116 423.3 839 40.6
arahy.Tifrunner.gnm1.ann1.0C9QHL Arachis hypogaea HOM05D003850 ORTHO05D004515 9.5e-116 422.2 855 41.3
TWI63G0294 Tripterygium wilfordii HOM05D003850 ORTHO05D004515 9.5e-116 422.2 321 75.7
ClCG07G001740 Citrullus lanatus HOM05D003850 ORTHO05D004515 1.8e-114 417.9 838 40.6
Lj6g0013016 Lotus japonicus HOM05D003850 ORTHO05D004515 1.8e-114 417.9 323 74.6
AUR62021872 Chenopodium quinoa HOM05D003850 ORTHO05D004515 6.8e-114 416.0 326 67.5
Sabra16G0017100 Salix brachista HOM05D003850 ORTHO05D004515 2.6e-113 414.1 331 69.2
Haze_08659 Corylus avellana HOM05D003850 ORTHO05D004515 3.4e-113 413.7 333 71.8
AL6G47570 Arabidopsis lyrata HOM05D003850 ORTHO05D004515 5.8e-113 412.9 844 41.4
HPP92_001629 Vanilla planifolia HOM05D003850 ORTHO05D004515 2.9e-112 410.6 839 38.7
CAN.G1186.28 Capsicum annuum HOM05D003850 ORTHO05D004515 9.2e-111 405.6 835 39.8
SEGI_18521 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 9.2e-111 405.6 849 41.6
Rhsim13G0146600 Rhododendron simsii HOM05D003850 ORTHO05D004515 1.0e-109 402.1 384 63.8
Cpa.g.sc75.120 Carica papaya HOM05D003850 ORTHO05D004515 3.0e-109 400.6 320 72.2
Cfa000110 Carpinus fangiana HOM05D003850 ORTHO05D004515 8.6e-109 399.1 839 40.0
Medtr2g025590 Medicago truncatula HOM05D003850 ORTHO05D004515 7.3e-108 396.0 848 40.0
MD05G1357300 Malus domestica HOM05D003850 ORTHO05D004515 4.7e-107 393.3 842 39.7
CDE06G1774 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 1.1e-106 392.1 324 66.4
Carub.0006s3188 Capsella rubella HOM05D003850 ORTHO05D004515 1.4e-106 391.7 848 41.0
AT4G12610 Arabidopsis thaliana HOM05D003850 ORTHO05D004515 1.8e-106 391.3 847 40.5
Sabra16G0000900 Salix brachista HOM05D003850 ORTHO05D004515 1.8e-106 391.3 330 63.3
A09p26740 Brassica napus HOM05D003850 ORTHO05D004515 1.2e-105 388.7 348 65.2
BraA09t38246Z Brassica rapa HOM05D003850 ORTHO05D004515 2.6e-105 387.5 348 64.9
FAN25G3770 Fragaria x ananassa HOM05D003850 ORTHO05D004515 4.4e-105 386.7 880 36.6
HanXRQChr15g0470091 Helianthus annuus HOM05D003850 ORTHO05D004515 1.3e-104 385.2 820 40.2
BcaC04g21251 Brassica carinata HOM05D003850 ORTHO05D004515 1.2e-102 378.6 322 70.8
C09p33830 Brassica napus HOM05D003850 ORTHO05D004515 1.2e-102 378.6 322 70.8
BolC9t56221H Brassica oleracea HOM05D003850 ORTHO05D004515 1.2e-102 378.6 322 70.8
FvH4_3g01042 Fragaria vesca HOM05D003850 ORTHO05D004515 2.0e-102 377.9 855 36.3
BcaB01g02623 Brassica carinata HOM05D003850 ORTHO05D004515 7.8e-102 375.9 310 69.0
BcaB01g01757 Brassica carinata HOM05D003850 ORTHO05D004515 2.3e-101 374.4 828 40.5
C03p36090 Brassica napus HOM05D003850 ORTHO05D004515 8.1e-99 365.9 844 41.5
BcaC01g04577 Brassica carinata HOM05D003850 ORTHO05D004515 1.4e-98 365.2 849 42.0
BolC3t15918H Brassica oleracea HOM05D003850 ORTHO05D004515 1.4e-98 365.2 849 42.0
A03p29830 Brassica napus HOM05D003850 ORTHO05D004515 8.9e-98 362.5 844 41.0
BraA03t12173Z Brassica rapa HOM05D003850 ORTHO05D004515 1.5e-97 361.7 849 40.9
PSO339G3925 Papaver somniferum HOM05D003850 ORTHO05D004515 1.5e-97 361.7 841 37.9
Lj4g0025543 Lotus japonicus HOM05D003850 ORTHO05D004515 2.2e-96 357.8 840 37.1
Sp6g04900 Schrenkiella parvula HOM05D003850 ORTHO05D004515 2.4e-95 354.4 845 41.4
FAN21G1422 Fragaria x ananassa HOM05D003850 ORTHO05D004515 4.1e-95 353.6 873 34.9
SHI24464 Sapria himalayana HOM05D003850 ORTHO05D004515 4.1e-95 353.6 831 35.7
CARHR253560 Cardamine hirsuta HOM05D003850 ORTHO05D004515 3.5e-94 350.5 845 38.8
MD10G1331000 Malus domestica HOM05D003850 ORTHO05D004515 3.9e-93 347.1 809 39.3
RcHm_v2.0_Chr5g0001581 Rosa chinensis HOM05D003850 ORTHO05D004515 1.5e-92 345.1 858 36.4
CDE04G2591 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 1.9e-92 344.7 284 70.8
Thhalv10028564m.g Eutrema salsugineum HOM05D003850 ORTHO05D004515 7.3e-92 342.8 839 39.5
Lsat_1_v5_gn_7_13561 Lactuca sativa HOM05D003850 ORTHO05D004515 1.2e-86 325.5 790 38.2
EL10Ac8g20176 Beta vulgaris HOM05D003850 ORTHO05D004515 1.7e-85 321.6 226 71.2
Pp3c3_2280 Physcomitrium patens HOM05D003850 ORTHO05D004515 2.5e-84 317.8 314 57.3
Mapoly0105s0015 Marchantia polymorpha HOM05D003850 ORTHO05D004515 5.6e-84 316.6 317 56.8
Zm00001eb224360 Zea mays HOM05D003850 ORTHO05D004515 1.8e-82 311.6 779 37.2
Hund23984 Selenicereus undatus HOM05D003850 ORTHO05D004515 9.0e-82 309.3 852 36.4
TPR.G34491 Trifolium pratense HOM05D003850 ORTHO05D004515 2.9e-80 304.3 195 75.4
MELO3C012788.2 Cucumis melo HOM05D003850 ORTHO05D004515 1.1e-79 302.4 761 38.0
Lj8A171G42 Lonicera japonica HOM05D003850 ORTHO05D004515 5.4e-79 300.1 839 32.2
RcHm_v2.0_Chr5g0007791 Rosa chinensis HOM05D003850 ORTHO05D004515 9.3e-79 299.3 335 54.6
FAN11G3915 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.5e-76 292.0 335 51.3
FvH4_3g04782 Fragaria vesca HOM05D003850 ORTHO05D004515 9.6e-76 289.3 335 51.6
FAN21G1676 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.3e-75 288.9 342 50.6
AagrBONN_evm.TU.Sc2ySwM_228.4136 Anthoceros agrestis HOM05D003850 ORTHO05D004515 1.6e-75 288.5 312 52.6
FAN03G2951 Fragaria x ananassa HOM05D003850 ORTHO05D004515 2.8e-75 287.7 342 50.3
Medtr2g025620 Medicago truncatula HOM05D003850 ORTHO05D004515 1.4e-74 285.4 217 66.8
FvH4_2g22070 Fragaria vesca HOM05D003850 ORTHO05D004515 5.3e-74 283.5 341 50.7
FAN16G3024 Fragaria x ananassa HOM05D003850 ORTHO05D004515 5.3e-74 283.5 339 49.9
Psat1g176560 Pisum sativum HOM05D003850 ORTHO05D004515 6.9e-74 283.1 763 36.7
Zm00001eb398520 Zea mays HOM05D003850 ORTHO05D004515 1.1e-71 275.8 322 48.4
FAN24G0125 Fragaria x ananassa HOM05D003850 ORTHO05D008045 9.3e-71 272.7 341 50.1
Duzib235G1223 Durio zibethinus HOM05D003850 ORTHO05D004515 2.1e-70 271.6 708 38.4
DCAR_025996 Daucus carota HOM05D003850 ORTHO05D004515 2.7e-70 271.2 223 76.7
SEGI_38016 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 1.1e-66 259.2 335 49.3
Peaxi162Scf00015g02110 Petunia axillaris HOM05D003850 ORTHO05D004515 4.9e-64 250.4 281 54.8
AUR62012783 Chenopodium quinoa HOM05D003850 ORTHO05D004515 3.3e-60 237.7 205 65.4
QL09p006300 Quercus lobata HOM05D003850 ORTHO05D004515 7.6e-57 226.5 659 35.7
Dinv07398 Davidia involucrata HOM05D003850 ORTHO05D004515 1.1e-55 222.6 185 77.3
HPP92_001646 Vanilla planifolia HOM05D003850 ORTHO05D004515 4.6e-46 190.7 199 60.8
Lsat_1_v5_gn_5_64561 Lactuca sativa HOM05D003952 ORTHO05D004515 2.2e-43 181.8 181 65.7
FAN25G2646 Fragaria x ananassa HOM05D003850 ORTHO05D004515 2.8e-35 154.8 299 36.8
CBR_g38333 Chara braunii HOM05D000019 ORTHO05D000002 4.8e-35 154.1 240 40.4
Gorai.002G145900 Gossypium raimondii HOM05D003850 ORTHO05D004515 9.1e-34 149.8 142 69.0
HPP92_001645 Vanilla planifolia HOM05D003850 ORTHO05D004515 5.0e-32 144.1 101 68.3
TPR.G13041 Trifolium pratense HOM05D003850 ORTHO05D004515 3.0e-29 134.8 659 30.3
Actinidia11880 Actinidia chinensis HOM05D003850 ORTHO05D004515 1.7e-27 129.0 642 29.0
PSO339G5270 Papaver somniferum HOM05D003850 ORTHO05D004515 3.7e-27 127.9 223 45.7
Sc17g0007710 Simmondsia chinensis HOM05D003850 ORTHO05D004515 1.3e-24 119.4 662 29.9
RcHm_v2.0_Chr6g0288941 Rosa chinensis HOM05D003850 ORTHO05D004515 4.2e-23 114.4 225 40.9
TAR629G2548 Trochodendron aralioides HOM05D003850 ORTHO05D004515 2.0e-20 105.5 311 31.2
CDE06G0619 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 4.4e-20 104.4 215 47.0
AagrBONN_evm.TU.Sc2ySwM_228.3786 Anthoceros agrestis HOM05D003850 ORTHO05D004515 7.5e-20 103.6 136 40.4
Lsat_1_v5_gn_3_78300 Lactuca sativa HOM05D002115 ORTHO05D002263 5.3e-18 97.4 56 83.9
PSO384G4333 Papaver somniferum HOM05D003850 ORTHO05D004515 7.0e-18 97.1 222 40.5
VMungo0720G0179 Vigna mungo HOM05D003850 ORTHO05D004515 1.2e-17 96.3 51 84.3
Gohir.D01G119450 Gossypium hirsutum HOM05D003850 ORTHO05D004515 3.5e-17 94.7 56 87.5
Eucgr.A01650 Eucalyptus grandis HOM05D002251 ORTHO05D004515 4.2e-15 87.8 54 64.8
CAN.G1186.27 Capsicum annuum HOM05D001620 ORTHO05D005461 2.7e-14 85.1 58 69.0
HPP92_001647 Vanilla planifolia HOM05D003850 ORTHO05D004515 2.3e-13 82.0 79 59.5
arahy.Tifrunner.gnm1.ann1.N7GRQP Arachis hypogaea HOM05D003850 ORTHO05D004515 7.5e-12 77.0 73 58.9
arahy.Tifrunner.gnm1.ann1.UE8YUV Arachis hypogaea HOM05D003850 ORTHO05D004515 7.5e-12 77.0 73 58.9
SEGI_29277 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 7.5e-12 77.0 214 32.7
Nitab4.5_0013082g0020 Nicotiana tabacum HOM05D003850 ORTHO05D004515 1.3e-11 76.3 72 59.7
arahy.Tifrunner.gnm1.ann1.5H9H8Z Arachis hypogaea HOM05D003850 ORTHO05D004515 2.2e-11 75.5 81 56.8
arahy.Tifrunner.gnm1.ann1.4A53N1 Arachis hypogaea HOM05D003850 ORTHO05D004515 1.1e-10 73.2 84 54.8
Nitab4.5_0006771g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 1.1e-10 73.2 73 60.3
Oeu048629.1 Olea europaea HOM05D018655 ORTHO05D288560 7.0e-10 70.5 111 46.8
AagrBONN_evm.TU.Sc2ySwM_228.3787 Anthoceros agrestis HOM05D003850 ORTHO05D004515 5.9e-09 67.4 224 40.6
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 1.0e-08 66.6 72 51.4
SEGI_19210 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 1.3e-08 66.2 130 28.5
arahy.Tifrunner.gnm1.ann1.GFC3N0 Arachis hypogaea HOM05D003850 ORTHO05D004515 3.3e-07 61.6 59 55.9
Aa31LG9G10030 Aethionema arabicum HOM05D003850 ORTHO05D004515 1.6e-06 59.3 54 63.0
FAN21G0780 Fragaria x ananassa HOM05D003850 ORTHO05D004515 2.1e-06 58.9 219 33.3


User provided reference genes

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