Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu022800.1 Olea europaea HOM05D003686 ORTHO05D004322 3.7e-62 241.9 176 100.0
Oeu022802.1 Olea europaea HOM05D003686 ORTHO05D004322 3.7e-62 241.9 176 100.0
MSTRG.12592 Avicennia marina HOM05D003686 ORTHO05D004322 1.8e-40 169.9 83 94.0
SalBow6G6913 Salvia bowleyana HOM05D003686 ORTHO05D004322 1.8e-40 169.9 92 89.1
SalBow8G5349 Salvia bowleyana HOM05D003686 ORTHO05D004322 1.8e-40 169.9 92 89.1
Solyc06g008860.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 1.7e-38 163.3 198 53.5
Nitab4.5_0000295g0050 Nicotiana tabacum HOM05D003686 ORTHO05D004322 2.9e-38 162.5 93 84.9
Nitab4.5_0004238g0080 Nicotiana tabacum HOM05D003686 ORTHO05D004322 6.4e-38 161.4 197 52.8
unitig_61.g26148 Utricularia gibba HOM05D003686 ORTHO05D004322 1.4e-37 160.2 94 84.0
Sopen06g003610 Solanum pennellii HOM05D003686 ORTHO05D004322 4.1e-37 158.7 198 53.0
PGSC0003DMG400021997 Solanum tuberosum HOM05D003686 ORTHO05D004322 5.4e-37 158.3 87 87.4
SGA_v2.0_scaffold172G39059 Striga asiatica HOM05D003686 ORTHO05D004322 3.5e-36 155.6 101 75.2
CAN.G1006.23 Capsicum annuum HOM05D003686 ORTHO05D004322 4.6e-36 155.2 87 85.1
Cc01_g20160 Coffea canephora HOM05D003686 ORTHO05D004322 7.8e-36 154.5 81 88.9
SGA_v2.0_scaffold36G14363 Striga asiatica HOM05D003686 ORTHO05D004322 1.7e-35 153.3 87 81.6
Migut.N02118 Erythranthe guttata HOM05D003686 ORTHO05D004322 5.1e-35 151.8 93 86.0
Migut.O00643 Erythranthe guttata HOM05D003686 ORTHO05D004322 5.1e-35 151.8 93 86.0
Rhsim13G0017700 Rhododendron simsii HOM05D003686 ORTHO05D004322 4.7e-33 145.2 95 82.1
Actinidia00703 Actinidia chinensis HOM05D003686 ORTHO05D004322 2.4e-32 142.9 95 77.9
vmacro17192 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 4.0e-32 142.1 95 77.9
HanXRQChr01g0002781 Helianthus annuus HOM05D003686 ORTHO05D004322 1.2e-31 140.6 85 81.2
Dinv11293 Davidia involucrata HOM05D003686 ORTHO05D004322 3.4e-31 139.0 90 77.8
Dinv11297 Davidia involucrata HOM05D003686 ORTHO05D004322 3.4e-31 139.0 90 77.8
COL.COLO4_08036 Corchorus olitorius HOM05D003686 ORTHO05D004322 5.8e-31 138.3 98 73.5
ECA248G2178 Erigeron canadensis HOM05D003686 ORTHO05D004322 1.3e-30 137.1 89 79.8
HanXRQChr11g0330151 Helianthus annuus HOM05D003686 ORTHO05D004322 2.2e-30 136.3 201 51.2
Ah.12g061550 Amaranthus hybridus HOM05D003686 ORTHO05D004322 2.9e-30 136.0 95 74.7
Thecc.10G102800 Theobroma cacao HOM05D003686 ORTHO05D004322 2.9e-30 136.0 95 74.7
TAR636G2878 Trochodendron aralioides HOM05D003686 ORTHO05D004322 4.9e-30 135.2 103 69.9
Duzib133G0241 Durio zibethinus HOM05D003686 ORTHO05D004322 8.4e-30 134.4 94 74.5
Duzib138G0197 Durio zibethinus HOM05D003686 ORTHO05D004322 8.4e-30 134.4 94 74.5
Lsat_1_v5_gn_5_188760 Lactuca sativa HOM05D003686 ORTHO05D004322 8.4e-30 134.4 89 78.7
AUR62025901 Chenopodium quinoa HOM05D003686 ORTHO05D004322 1.9e-29 133.3 95 72.6
AUR62025902 Chenopodium quinoa HOM05D003686 ORTHO05D004322 1.9e-29 133.3 95 72.6
Gorai.007G132200 Gossypium raimondii HOM05D003686 ORTHO05D004322 1.9e-29 133.3 99 72.7
Atru.chr5.1287 Acer truncatum HOM05D003686 ORTHO05D004322 3.2e-29 132.5 94 73.4
MSTRG.21821 Avicennia marina HOM05D003686 ORTHO05D004322 3.2e-29 132.5 101 63.4
DCAR_007018 Daucus carota HOM05D003686 ORTHO05D004322 3.2e-29 132.5 90 73.3
Gohir.A11G118400 Gossypium hirsutum HOM05D003686 ORTHO05D004322 5.4e-29 131.7 99 72.7
Gohir.D11G123300 Gossypium hirsutum HOM05D003686 ORTHO05D004322 5.4e-29 131.7 93 74.2
PGR031G1643 Punica granatum HOM05D003686 ORTHO05D004322 5.4e-29 131.7 97 70.1
Cpa.g.sc9.157 Carica papaya HOM05D003686 ORTHO05D004322 7.1e-29 131.3 93 74.2
ClCG09G006530 Citrullus lanatus HOM05D003686 ORTHO05D004322 7.1e-29 131.3 94 72.3
QL07p015848 Quercus lobata HOM05D003686 ORTHO05D004322 7.1e-29 131.3 100 70.0
QL93p0358_0011 Quercus lobata HOM05D003686 ORTHO05D004322 7.1e-29 131.3 100 70.0
CANSAT78G2257 Cannabis sativa HOM05D003686 ORTHO05D004322 9.2e-29 131.0 89 74.2
MELO3C015891.2 Cucumis melo HOM05D003686 ORTHO05D004322 9.2e-29 131.0 94 72.3
Manes.01G213100 Manihot esculenta HOM05D003686 ORTHO05D004322 9.2e-29 131.0 94 72.3
PSO801G0146 Papaver somniferum HOM05D003686 ORTHO05D004322 9.2e-29 131.0 101 68.3
Phvul.007G166600 Phaseolus vulgaris HOM05D003686 ORTHO05D004322 9.2e-29 131.0 100 72.0
CiPaw.07G099200 Carya illinoinensis HOM05D003686 ORTHO05D004322 1.2e-28 130.6 95 71.6
CiPaw.08G100800 Carya illinoinensis HOM05D003686 ORTHO05D004322 1.2e-28 130.6 96 70.8
Ciclev10022350m.g Citrus clementina HOM05D003686 ORTHO05D004322 1.2e-28 130.6 95 71.6
Eucgr.A00286 Eucalyptus grandis HOM05D003686 ORTHO05D004322 1.2e-28 130.6 94 73.4
Eucgr.B02749 Eucalyptus grandis HOM05D003686 ORTHO05D004322 1.2e-28 130.6 89 75.3
Potri.003G058400 Populus trichocarpa HOM05D003686 ORTHO05D004322 1.2e-28 130.6 98 70.4
Haze_04804 Corylus avellana HOM05D003686 ORTHO05D004322 1.6e-28 130.2 98 70.4
Glyma.02G152300 Glycine max HOM05D003686 ORTHO05D004322 1.6e-28 130.2 100 71.0
Glyma.10G021900 Glycine max HOM05D003686 ORTHO05D004322 1.6e-28 130.2 100 71.0
Nn1g08910 Nelumbo nucifera HOM05D003686 ORTHO05D004322 1.6e-28 130.2 104 67.3
AUR62029649 Chenopodium quinoa HOM05D003686 ORTHO05D004322 2.1e-28 129.8 95 71.6
CsaV3_7G028310 Cucumis sativus L. HOM05D003686 ORTHO05D004322 2.1e-28 129.8 94 71.3
Manes.05G068800 Manihot esculenta HOM05D003686 ORTHO05D004322 2.1e-28 129.8 94 72.3
Os02g0266100 Oryza sativa ssp. japonica HOM05D003686 ORTHO05D004322 2.1e-28 129.8 104 69.2
Sed0010038 Sechium edule HOM05D003686 ORTHO05D004322 2.1e-28 129.8 94 71.3
TAR365G0683 Trochodendron aralioides HOM05D003686 ORTHO05D004322 2.7e-28 129.4 104 68.3
TWI14G0352 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 4.6e-28 128.6 102 67.6
GSVIVG01011011001 Vitis vinifera HOM05D003686 ORTHO05D004322 4.6e-28 128.6 100 68.0
TWI23G0547 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 6.0e-28 128.3 104 68.3
Zm00001eb203990 Zea mays HOM05D003686 ORTHO05D004322 6.0e-28 128.3 104 69.2
arahy.Tifrunner.gnm1.ann1.MV1AMG Arachis hypogaea HOM05D003686 ORTHO05D004322 7.8e-28 127.9 99 69.7
Ca_09109_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 7.8e-28 127.9 93 74.2
ECA247G2101 Erigeron canadensis HOM05D003686 ORTHO05D004322 7.8e-28 127.9 81 77.8
DCAR_012430 Daucus carota HOM05D003686 ORTHO05D004322 1.3e-27 127.1 95 67.4
Lalb_Chr02g0143061 Lupinus albus HOM05D003686 ORTHO05D004322 1.3e-27 127.1 94 68.1
Migut.N00130 Erythranthe guttata HOM05D003686 ORTHO05D004322 1.7e-27 126.7 101 61.4
THA.LOC104826011 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 1.7e-27 126.7 88 72.7
Gohir.A08G043900 Gossypium hirsutum HOM05D003686 ORTHO05D004322 2.3e-27 126.3 97 69.1
Gohir.D08G053600 Gossypium hirsutum HOM05D003686 ORTHO05D004322 2.3e-27 126.3 97 69.1
Gorai.004G053600 Gossypium raimondii HOM05D003686 ORTHO05D004322 2.3e-27 126.3 97 69.1
Mapoly0103s0046 Marchantia polymorpha HOM05D003686 ORTHO05D004322 2.3e-27 126.3 100 63.0
Medtr7g107640 Medicago truncatula HOM05D003686 ORTHO05D004322 2.3e-27 126.3 98 66.3
Psat3g024960 Pisum sativum HOM05D003686 ORTHO05D004322 2.3e-27 126.3 98 66.3
Lalb_Chr06g0163281 Lupinus albus HOM05D003686 ORTHO05D004322 3.0e-27 125.9 100 69.0
QL04p005272 Quercus lobata HOM05D003686 ORTHO05D004322 3.0e-27 125.9 100 66.0
CDE11G0890 Ceratophyllum demersum HOM05D003686 ORTHO05D004322 3.9e-27 125.6 99 66.7
FAN20G0133 Fragaria x ananassa HOM05D003686 ORTHO05D004322 3.9e-27 125.6 97 69.1
FAN27G0391 Fragaria x ananassa HOM05D003686 ORTHO05D004322 3.9e-27 125.6 97 69.1
RcHm_v2.0_Chr6g0292481 Rosa chinensis HOM05D003686 ORTHO05D004322 3.9e-27 125.6 97 69.1
Aqoxy2G03146 Aquilegia oxysepala HOM05D003686 ORTHO05D004322 5.1e-27 125.2 117 58.1
Hma1.2p1_0643F.1_g194695 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 5.1e-27 125.2 93 71.0
Hma1.2p1_0643F.1_g194700 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 5.1e-27 125.2 93 71.0
Hma1.2p1_0643F.1_g194710 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 5.1e-27 125.2 93 71.0
Hma1.2p1_0643F.1_g194711 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 5.1e-27 125.2 93 71.0
Lj1g0025208 Lotus japonicus HOM05D003686 ORTHO05D004322 5.1e-27 125.2 103 64.1
Prupe.8G251800 Prunus persica HOM05D003686 ORTHO05D004322 5.1e-27 125.2 103 64.1
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 5.1e-27 125.2 96 68.8
ATR0706G002 Amborella trichopoda HOM05D003686 ORTHO05D004322 6.6e-27 124.8 99 67.7
TPR.G15798 Trifolium pratense HOM05D003686 ORTHO05D004322 6.6e-27 124.8 203 51.2
BcaB01g01979 Brassica carinata HOM05D003686 ORTHO05D004322 1.1e-26 124.0 88 70.5
FvH4_2g24650 Fragaria vesca HOM05D003686 ORTHO05D004322 1.5e-26 123.6 97 69.1
Sed0008045 Sechium edule HOM05D003686 ORTHO05D004322 1.5e-26 123.6 92 69.6
Thhalv10028986m.g Eutrema salsugineum HOM05D003686 ORTHO05D004322 1.9e-26 123.2 96 66.7
Sp6g03160 Schrenkiella parvula HOM05D003686 ORTHO05D004322 1.9e-26 123.2 96 66.7
VMungo0720G0802 Vigna mungo HOM05D003686 ORTHO05D004322 1.9e-26 123.2 98 69.4
Ca_10377_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 2.5e-26 122.9 96 66.7
Ca_29655_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 2.5e-26 122.9 96 66.7
Medtr1g088990 Medicago truncatula HOM05D003686 ORTHO05D004322 2.5e-26 122.9 208 54.8
PSO339G4974 Papaver somniferum HOM05D003686 ORTHO05D004322 2.5e-26 122.9 94 69.1
Cfa010467 Carpinus fangiana HOM05D003686 ORTHO05D004322 3.3e-26 122.5 93 69.9
PGSC0003DMG400022854 Solanum tuberosum HOM05D003686 ORTHO05D004322 3.3e-26 122.5 101 61.4
Lj5g0005016 Lotus japonicus HOM05D003686 ORTHO05D004322 4.3e-26 122.1 102 65.7
BcaB01g02510 Brassica carinata HOM05D003686 ORTHO05D004322 5.6e-26 121.7 88 69.3
BcaC01g06704 Brassica carinata HOM05D003686 ORTHO05D004322 5.6e-26 121.7 88 69.3
Sc25g0004660 Simmondsia chinensis HOM05D003686 ORTHO05D004322 7.3e-26 121.3 93 67.7
TAR362G1277 Trochodendron aralioides HOM05D003686 ORTHO05D004322 7.3e-26 121.3 105 62.9
A03p30600 Brassica napus HOM05D003686 ORTHO05D004322 9.6e-26 120.9 102 62.7
Solyc01g067830.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 9.6e-26 120.9 101 60.4
Sopen01g029780 Solanum pennellii HOM05D003686 ORTHO05D004322 1.2e-25 120.6 101 60.4
FAN15G3346 Fragaria x ananassa HOM05D003686 ORTHO05D004322 1.6e-25 120.2 100 67.0
Peaxi162Scf01364g00015 Petunia axillaris HOM05D003686 ORTHO05D004322 1.6e-25 120.2 101 58.4
THA.LOC104817532 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 2.1e-25 119.8 95 65.3
BolC9t53184H Brassica oleracea HOM05D003686 ORTHO05D004322 2.8e-25 119.4 86 69.8
EL10Ac2g03326 Beta vulgaris HOM05D003686 ORTHO05D004322 3.6e-25 119.0 78 75.6
BcaB05g23688 Brassica carinata HOM05D003686 ORTHO05D004322 3.6e-25 119.0 96 64.6
BcaB05g23689 Brassica carinata HOM05D003686 ORTHO05D004322 3.6e-25 119.0 96 64.6
AagrBONN_evm.TU.Sc2ySwM_228.930 Anthoceros agrestis HOM05D003686 ORTHO05D004322 4.7e-25 118.6 75 77.3
A09p02440 Brassica napus HOM05D003686 ORTHO05D004322 6.2e-25 118.2 90 66.7
BraA09t35891Z Brassica rapa HOM05D003686 ORTHO05D004322 6.2e-25 118.2 90 66.7
AT4G03120 Arabidopsis thaliana HOM05D003686 ORTHO05D004322 8.1e-25 117.9 111 58.6
MD03G1275200 Malus domestica HOM05D003686 ORTHO05D004322 8.1e-25 117.9 104 58.7
Carub.0006s3393 Capsella rubella HOM05D003686 ORTHO05D004322 1.1e-24 117.5 59 88.1
COL.COLO4_34092 Corchorus olitorius HOM05D003686 ORTHO05D004322 1.1e-24 117.5 95 65.3
BolC3t16013H Brassica oleracea HOM05D003686 ORTHO05D004322 1.4e-24 117.1 86 68.6
C03p37160 Brassica napus HOM05D003686 ORTHO05D004322 1.8e-24 116.7 103 65.0
MD11G1297300 Malus domestica HOM05D003686 ORTHO05D004322 2.4e-24 116.3 59 86.4
BraA03t12240Z Brassica rapa HOM05D003686 ORTHO05D004322 3.1e-24 115.9 100 62.0
CAN.G185.6 Capsicum annuum HOM05D003686 ORTHO05D004322 3.1e-24 115.9 99 59.6
CARHR251560 Cardamine hirsuta HOM05D003686 ORTHO05D004322 3.1e-24 115.9 93 64.5
Mapoly0087s0074 Marchantia polymorpha HOM05D003686 ORTHO05D004322 3.1e-24 115.9 99 65.7
BraA02t07500Z Brassica rapa HOM05D003686 ORTHO05D004322 6.9e-24 114.8 105 61.0
CSS0048633 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 9.0e-24 114.4 111 55.0
Pp3c12_26180 Physcomitrium patens HOM05D003686 ORTHO05D004322 1.5e-23 113.6 59 88.1
Pp3c4_170 Physcomitrium patens HOM05D003686 ORTHO05D004322 1.5e-23 113.6 59 88.1
arahy.Tifrunner.gnm1.ann1.TAZ1K7 Arachis hypogaea HOM05D003686 ORTHO05D004322 4.4e-23 112.1 129 53.5
Psat3g182400 Pisum sativum HOM05D003686 ORTHO05D004322 2.9e-22 109.4 72 66.7
Psat0s3642g0040 Pisum sativum HOM05D000068 ORTHO05D025728 1.9e-21 106.7 72 68.1
Peaxi162Scf00936g00218 Petunia axillaris HOM05D003686 ORTHO05D004322 5.4e-21 105.1 85 68.2
A02p25120 Brassica napus HOM05D003686 ORTHO05D004322 7.1e-21 104.8 99 57.6
BolC2t10013H Brassica oleracea HOM05D003686 ORTHO05D004322 7.1e-21 104.8 95 60.0
HPP92_021468 Vanilla planifolia HOM05D003686 ORTHO05D004322 7.1e-21 104.8 56 83.9
BcaC03g16209 Brassica carinata HOM05D003686 ORTHO05D004322 2.7e-20 102.8 94 59.6
CSS0007511 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 3.0e-19 99.4 74 71.6
CSS0037271 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 3.0e-19 99.4 74 71.6
vmacro02511 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 3.9e-19 99.0 78 70.5
SGA_v2.0_scaffold89G27564 Striga asiatica HOM05D003686 ORTHO05D004322 1.9e-18 96.7 112 46.4
Nitab4.5_0001149g0030 Nicotiana tabacum HOM05D003686 ORTHO05D004322 4.8e-17 92.0 101 51.5
Nitab4.5_0001624g0040 Nicotiana tabacum HOM05D003686 ORTHO05D004322 4.8e-17 92.0 101 51.5
Sabra03G0032800 Salix brachista HOM05D003686 ORTHO05D004322 2.4e-16 89.7 81 64.2
Lj2P1184T34 Lonicera japonica HOM05D003686 ORTHO05D004322 2.6e-15 86.3 89 57.3
FAN20G1534 Fragaria x ananassa HOM05D003686 ORTHO05D004322 5.8e-15 85.1 80 62.5
Psat6g168000 Pisum sativum HOM05D003686 ORTHO05D004322 5.8e-15 85.1 188 39.9
C09p02540 Brassica napus HOM05D003686 ORTHO05D004322 1.7e-14 83.6 71 63.4
HPP92_021461 Vanilla planifolia HOM05D003686 ORTHO05D004322 1.7e-14 83.6 73 63.0
FAN24G2968 Fragaria x ananassa HOM05D003686 ORTHO05D004322 2.2e-14 83.2 80 62.5
Cre09.g401300 Chlamydomonas reinhardtii HOM05D003686 ORTHO05D004322 1.1e-13 80.9 41 80.5
Hund24902 Selenicereus undatus HOM05D003686 ORTHO05D004322 1.4e-13 80.5 61 68.9
Lj3A810T51 Lonicera japonica HOM05D003686 ORTHO05D004322 3.2e-13 79.3 83 57.8
Nn2g12370 Nelumbo nucifera HOM05D003686 ORTHO05D004322 3.2e-13 79.3 84 57.1
unitig_22.g6331 Utricularia gibba HOM05D003686 ORTHO05D004322 9.3e-13 77.8 92 46.7
vmacro14957 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 1.9e-10 70.1 72 59.7
vmacro14959 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 7.4e-10 68.2 98 48.0
Duzib211G0369 Durio zibethinus HOM05D003686 ORTHO05D004322 1.8e-08 63.5 65 60.0
PRCOL_00005459 Prasinoderma coloniale HOM05D003686 ORTHO05D004322 4.0e-08 62.4 75 46.7
Lj5g0025755 Lotus japonicus HOM05D003686 ORTHO05D009933 6.9e-08 61.6 59 54.2
Peaxi162Scf01067g00002 Petunia axillaris HOM05D003686 ORTHO05D004322 2.2e-06 56.6 71 45.1


User provided reference genes

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