Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002760.2 Olea europaea HOM05D003850 ORTHO05D004515 9.3e-272 939.9 571 100.0
MSTRG.7170 Avicennia marina HOM05D003850 ORTHO05D004515 5.9e-202 708.0 571 75.3
Oeu044421.3 Olea europaea HOM05D003850 ORTHO05D004515 4.0e-190 668.7 832 55.6
SGA_v2.0_scaffold4G01878 Striga asiatica HOM05D003850 ORTHO05D004515 4.9e-188 661.8 541 79.1
SalBow8G5272 Salvia bowleyana HOM05D003850 ORTHO05D004515 6.4e-188 661.4 581 72.1
CSS0032808 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 2.4e-187 659.4 576 70.7
Cc09_g00920 Coffea canephora HOM05D003850 ORTHO05D004515 1.7e-185 653.3 574 74.9
Migut.M01390 Erythranthe guttata HOM05D003850 ORTHO05D004515 3.9e-185 652.1 570 67.9
QL05p069776 Quercus lobata HOM05D003850 ORTHO05D004515 9.5e-184 647.5 578 70.2
Nn1g03331 Nelumbo nucifera HOM05D003850 ORTHO05D004515 2.9e-180 636.0 580 70.7
TAR624G0821 Trochodendron aralioides HOM05D003850 ORTHO05D004515 1.1e-179 634.0 578 70.9
CSS0007684 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 1.0e-177 627.5 579 69.3
Nn1g07354 Nelumbo nucifera HOM05D003850 ORTHO05D004515 3.1e-174 615.9 577 70.5
Ciclev10014841m.g Citrus clementina HOM05D003850 ORTHO05D004515 8.9e-174 614.4 579 67.7
Atru.chr1.2461 Acer truncatum HOM05D003850 ORTHO05D004515 7.6e-173 611.3 580 67.1
CiPaw.09G102000 Carya illinoinensis HOM05D003850 ORTHO05D004515 6.4e-172 608.2 581 68.0
Nitab4.5_0001198g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 1.1e-171 607.4 565 66.7
Potri.006G009100 Populus trichocarpa HOM05D003850 ORTHO05D004515 2.4e-171 606.3 576 68.9
Duzib160G0220 Durio zibethinus HOM05D003850 ORTHO05D004515 3.2e-171 605.9 590 67.5
Sopen11g006940 Solanum pennellii HOM05D003850 ORTHO05D004515 5.4e-171 605.1 572 64.9
RhsimUnG0025700 Rhododendron simsii HOM05D003850 ORTHO05D004515 4.6e-170 602.1 622 65.8
RhsimUnG0028500 Rhododendron simsii HOM05D003850 ORTHO05D004515 4.6e-170 602.1 622 65.8
CANSAT56G0590 Cannabis sativa HOM05D003850 ORTHO05D004515 8.7e-169 597.8 577 64.6
TAR629G2665 Trochodendron aralioides HOM05D003850 ORTHO05D004515 8.7e-169 597.8 575 68.2
Eucgr.E03951 Eucalyptus grandis HOM05D003850 ORTHO05D004515 1.1e-168 597.4 583 67.2
GSVIVG01003352001 Vitis vinifera HOM05D003850 ORTHO05D004515 8.1e-167 591.3 578 70.8
Aqoxy1G04110 Aquilegia oxysepala HOM05D003850 ORTHO05D004515 5.8e-165 585.1 578 61.8
VMungo1215G3075 Vigna mungo HOM05D003850 ORTHO05D004515 1.3e-164 583.9 579 67.5
THA.LOC104812992 Tarenaya hassleriana HOM05D003850 ORTHO05D004515 2.1e-162 576.6 583 63.8
vmacro15772 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 3.0e-161 572.8 588 68.7
Thecc.06G232700 Theobroma cacao HOM05D003850 ORTHO05D004515 6.6e-161 571.6 590 64.2
Manes.07G088900 Manihot esculenta HOM05D003850 ORTHO05D004515 1.1e-160 570.9 573 67.4
arahy.Tifrunner.gnm1.ann1.C17RPB Arachis hypogaea HOM05D003850 ORTHO05D004515 7.3e-160 568.2 577 61.9
Ca_00718_v3 Cicer arietinum L. HOM05D003850 ORTHO05D004515 3.6e-159 565.8 578 61.4
Prupe.4G011300 Prunus persica HOM05D003850 ORTHO05D004515 2.0e-157 560.1 578 64.0
arahy.Tifrunner.gnm1.ann1.IIR6TV Arachis hypogaea HOM05D003850 ORTHO05D004515 1.3e-156 557.4 579 61.0
Nitab4.5_0000143g0310 Nicotiana tabacum HOM05D003850 ORTHO05D004515 1.3e-156 557.4 565 64.1
Gorai.010G186300 Gossypium raimondii HOM05D003850 ORTHO05D004515 3.8e-156 555.8 589 67.4
ECA233G3046 Erigeron canadensis HOM05D003850 ORTHO05D004515 1.4e-155 553.9 583 65.5
PSO210G4264 Papaver somniferum HOM05D003850 ORTHO05D004515 1.9e-155 553.5 580 62.1
Phvul.003G083500 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 2.4e-155 553.1 579 65.6
Sed0003006 Sechium edule HOM05D003850 ORTHO05D004515 4.2e-155 552.4 578 63.5
PGR102G0753 Punica granatum HOM05D003850 ORTHO05D004515 9.3e-155 551.2 578 64.0
unitig_748.g7103 Utricularia gibba HOM05D003850 ORTHO05D004515 3.5e-154 549.3 568 64.8
Glyma.09G009900 Glycine max HOM05D003850 ORTHO05D004515 4.6e-154 548.9 580 61.2
Gohir.A06G153120 Gossypium hirsutum HOM05D003850 ORTHO05D004515 6.0e-154 548.5 589 66.7
Peaxi162Scf00558g00516 Petunia axillaris HOM05D003850 ORTHO05D004515 6.0e-154 548.5 517 69.6
Phvul.006G143600 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 1.3e-153 547.4 580 61.2
Gohir.D06G159600 Gossypium hirsutum HOM05D003850 ORTHO05D004515 1.8e-153 547.0 589 67.1
AL6G47570 Arabidopsis lyrata HOM05D003850 ORTHO05D004515 1.9e-152 543.5 581 68.2
MBI16_g42266_MAGBIO Magnolia biondii HOM05D003850 ORTHO05D004515 4.3e-152 542.3 576 62.7
arahy.Tifrunner.gnm1.ann1.97WSNQ Arachis hypogaea HOM05D003850 ORTHO05D004515 1.3e-151 540.8 592 64.7
Solyc11g012150.3 Solanum lycopersicum HOM05D003850 ORTHO05D004515 1.3e-151 540.8 535 63.7
ATR0751G086 Amborella trichopoda HOM05D003850 ORTHO05D004515 2.1e-151 540.0 585 62.6
PGSC0003DMG400013344 Solanum tuberosum HOM05D003850 ORTHO05D004515 2.1e-151 540.0 536 64.0
Potri.016G015100 Populus trichocarpa HOM05D003850 ORTHO05D004515 8.1e-151 538.1 576 63.5
Sabra06G0006900 Salix brachista HOM05D003850 ORTHO05D004515 9.0e-150 534.6 581 62.1
TPR.G3343 Trifolium pratense HOM05D003850 ORTHO05D004515 2.6e-149 533.1 579 61.7
Cfa000110 Carpinus fangiana HOM05D003850 ORTHO05D004515 4.5e-149 532.3 578 65.2
VMungo0540G1287 Vigna mungo HOM05D003850 ORTHO05D004515 7.6e-149 531.6 579 59.9
Medtr2g025590 Medicago truncatula HOM05D003850 ORTHO05D004515 1.0e-148 531.2 574 64.6
arahy.Tifrunner.gnm1.ann1.0C9QHL Arachis hypogaea HOM05D003850 ORTHO05D004515 1.7e-148 530.4 593 63.9
CsaV3_3G028740 Cucumis sativus L. HOM05D003850 ORTHO05D004515 4.2e-147 525.8 580 61.7
COL.COLO4_31876 Corchorus olitorius HOM05D003850 ORTHO05D004515 1.2e-146 524.2 586 61.1
Lj2A262G45 Lonicera japonica HOM05D003850 ORTHO05D004515 3.0e-145 519.6 548 65.1
Lalb_Chr20g0119201 Lupinus albus HOM05D003850 ORTHO05D004515 3.0e-145 519.6 586 57.7
TWI63G0294 Tripterygium wilfordii HOM05D003850 ORTHO05D004515 5.1e-145 518.8 548 69.0
AT4G12610 Arabidopsis thaliana HOM05D003850 ORTHO05D004515 7.4e-144 515.0 582 65.1
Aa31LG9G10040 Aethionema arabicum HOM05D003850 ORTHO05D004515 9.6e-144 514.6 597 61.8
CiPaw.10G077600 Carya illinoinensis HOM05D003850 ORTHO05D004515 1.3e-143 514.2 528 59.8
Haze_08659 Corylus avellana HOM05D003850 ORTHO05D004515 1.4e-142 510.8 617 58.7
Carub.0006s3188 Capsella rubella HOM05D003850 ORTHO05D004515 6.9e-142 508.4 581 65.4
Cpa.g.sc75.120 Carica papaya HOM05D003850 ORTHO05D004515 9.0e-142 508.1 578 64.5
Actinidia39269 Actinidia chinensis HOM05D003850 ORTHO05D004515 1.2e-141 507.7 394 73.4
HanXRQChr15g0470091 Helianthus annuus HOM05D003850 ORTHO05D004515 4.5e-141 505.8 562 65.5
MD05G1357300 Malus domestica HOM05D003850 ORTHO05D004515 2.2e-140 503.4 583 61.4
HPP92_001629 Vanilla planifolia HOM05D003850 ORTHO05D004515 5.0e-140 502.3 574 55.4
PSO302G0165 Papaver somniferum HOM05D003850 ORTHO05D004515 1.4e-139 500.7 578 59.2
SEGI_18521 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 4.6e-138 495.7 586 58.9
CAN.G1186.28 Capsicum annuum HOM05D003850 ORTHO05D004515 7.9e-138 495.0 574 57.7
ClCG07G001740 Citrullus lanatus HOM05D003850 ORTHO05D004515 1.3e-137 494.2 576 59.4
Sabra16G0017100 Salix brachista HOM05D003850 ORTHO05D004515 8.7e-137 491.5 608 55.3
Glyma.15G114200 Glycine max HOM05D003850 ORTHO05D004515 1.1e-136 491.1 582 56.0
Sabra16G0000900 Salix brachista HOM05D003850 ORTHO05D004515 3.3e-136 489.6 586 52.6
C03p36090 Brassica napus HOM05D003850 ORTHO05D004515 1.3e-135 487.6 583 64.2
A03p29830 Brassica napus HOM05D003850 ORTHO05D004515 3.7e-135 486.1 583 64.0
CARHR253560 Cardamine hirsuta HOM05D003850 ORTHO05D004515 4.8e-135 485.7 579 64.4
BcaC01g04577 Brassica carinata HOM05D003850 ORTHO05D004515 6.3e-135 485.3 585 63.9
BolC3t15918H Brassica oleracea HOM05D003850 ORTHO05D004515 6.3e-135 485.3 585 63.9
BraA03t12173Z Brassica rapa HOM05D003850 ORTHO05D004515 3.1e-134 483.0 585 63.6
AUR62021872 Chenopodium quinoa HOM05D003850 ORTHO05D004515 7.7e-133 478.4 579 52.5
PSO339G3925 Papaver somniferum HOM05D003850 ORTHO05D004515 1.7e-132 477.2 581 60.2
Lj4g0025543 Lotus japonicus HOM05D003850 ORTHO05D004515 6.5e-132 475.3 578 55.5
MD10G1331000 Malus domestica HOM05D003850 ORTHO05D004515 2.5e-131 473.4 560 63.0
Thhalv10028564m.g Eutrema salsugineum HOM05D003850 ORTHO05D004515 1.0e-129 468.0 578 62.6
FAN25G3770 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.4e-129 467.6 623 52.2
vmacro03646 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 1.4e-129 467.6 604 51.3
Lj6g0013016 Lotus japonicus HOM05D003850 ORTHO05D004515 1.5e-128 464.2 581 60.9
Sp6g04900 Schrenkiella parvula HOM05D003850 ORTHO05D004515 7.4e-128 461.8 581 62.5
FvH4_3g01042 Fragaria vesca HOM05D003850 ORTHO05D004515 2.8e-127 459.9 598 52.3
BolC9t56221H Brassica oleracea HOM05D003850 ORTHO05D004515 5.3e-126 455.7 573 59.2
RcHm_v2.0_Chr5g0001581 Rosa chinensis HOM05D003850 ORTHO05D004515 1.5e-125 454.1 598 55.7
BcaB01g01757 Brassica carinata HOM05D003850 ORTHO05D004515 2.6e-125 453.4 568 57.9
SHI24464 Sapria himalayana HOM05D003850 ORTHO05D004515 4.5e-125 452.6 570 52.1
RhsimUnG0109100 Rhododendron simsii HOM05D003850 ORTHO05D004515 6.7e-121 438.7 568 56.0
Lsat_1_v5_gn_7_13561 Lactuca sativa HOM05D003850 ORTHO05D004515 2.6e-120 436.8 535 63.4
CDE04G2591 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 3.3e-120 436.4 580 56.2
FAN21G1422 Fragaria x ananassa HOM05D003850 ORTHO05D004515 5.7e-120 435.6 616 50.0
BraA09t38246Z Brassica rapa HOM05D003850 ORTHO05D004515 9.7e-120 434.9 575 55.5
BcaB01g02623 Brassica carinata HOM05D003850 ORTHO05D004515 1.3e-119 434.5 571 58.1
Lj8A171G42 Lonicera japonica HOM05D003850 ORTHO05D004515 1.6e-117 427.6 578 48.8
Hund23984 Selenicereus undatus HOM05D003850 ORTHO05D004515 8.5e-116 421.8 593 57.3
A09p26740 Brassica napus HOM05D003850 ORTHO05D004515 8.0e-114 415.2 572 54.4
Rhsim13G0146600 Rhododendron simsii HOM05D003850 ORTHO05D004515 2.3e-113 413.7 622 51.1
EL10Ac8g20176 Beta vulgaris HOM05D003850 ORTHO05D004515 5.7e-112 409.1 583 55.7
BcaC04g21251 Brassica carinata HOM05D003850 ORTHO05D004515 2.8e-111 406.8 570 56.0
C09p33830 Brassica napus HOM05D003850 ORTHO05D004515 2.8e-111 406.8 570 56.0
Zm00001eb224360 Zea mays HOM05D003850 ORTHO05D004515 2.4e-110 403.7 522 57.3
Psat1g176560 Pisum sativum HOM05D003850 ORTHO05D004515 8.5e-108 395.2 503 62.0
MELO3C012788.2 Cucumis melo HOM05D003850 ORTHO05D004515 6.1e-106 389.0 503 59.2
Mapoly0105s0015 Marchantia polymorpha HOM05D003850 ORTHO05D004515 5.9e-101 372.5 585 47.9
CDE06G1774 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 2.5e-99 367.1 324 63.0
DCAR_025996 Daucus carota HOM05D003850 ORTHO05D004515 7.2e-99 365.5 477 63.5
RcHm_v2.0_Chr5g0007791 Rosa chinensis HOM05D003850 ORTHO05D004515 6.1e-98 362.5 587 46.7
Pp3c3_2280 Physcomitrium patens HOM05D003850 ORTHO05D004515 8.0e-98 362.1 585 47.2
Duzib235G1223 Durio zibethinus HOM05D003850 ORTHO05D004515 1.3e-95 354.8 447 61.7
QL09p006300 Quercus lobata HOM05D003850 ORTHO05D004515 4.0e-89 333.2 399 64.2
FvH4_2g22070 Fragaria vesca HOM05D003850 ORTHO05D004515 1.2e-88 331.6 587 42.1
FvH4_3g04782 Fragaria vesca HOM05D003850 ORTHO05D004515 4.4e-88 329.7 585 41.7
FAN11G3915 Fragaria x ananassa HOM05D003850 ORTHO05D004515 7.5e-88 328.9 586 41.6
FAN16G3024 Fragaria x ananassa HOM05D003850 ORTHO05D004515 8.3e-87 325.5 579 42.3
FAN21G1676 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.8e-86 324.3 575 42.4
FAN24G0125 Fragaria x ananassa HOM05D003850 ORTHO05D008045 1.8e-86 324.3 587 42.1
FAN03G2951 Fragaria x ananassa HOM05D003850 ORTHO05D004515 4.1e-86 323.2 575 42.3
Dinv07398 Davidia involucrata HOM05D003850 ORTHO05D004515 2.7e-85 320.5 362 69.1
Zm00001eb398520 Zea mays HOM05D003850 ORTHO05D004515 2.7e-85 320.5 572 39.0
Medtr2g025620 Medicago truncatula HOM05D003850 ORTHO05D004515 9.5e-83 312.0 550 51.1
TPR.G34491 Trifolium pratense HOM05D003850 ORTHO05D004515 1.0e-81 308.5 195 75.4
AUR62012783 Chenopodium quinoa HOM05D003850 ORTHO05D004515 1.5e-80 304.7 458 47.4
AagrBONN_evm.TU.Sc2ySwM_228.4136 Anthoceros agrestis HOM05D003850 ORTHO05D004515 7.0e-78 295.8 384 50.8
TPR.G13041 Trifolium pratense HOM05D003850 ORTHO05D004515 2.6e-64 250.8 400 57.5
Peaxi162Scf00015g02110 Petunia axillaris HOM05D003850 ORTHO05D004515 2.9e-63 247.3 348 50.9
SEGI_38016 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 1.0e-60 238.8 329 48.6
Sc17g0007710 Simmondsia chinensis HOM05D003850 ORTHO05D004515 1.5e-59 235.0 404 57.4
Actinidia11880 Actinidia chinensis HOM05D003850 ORTHO05D004515 2.9e-55 220.7 309 50.8
FAN25G2646 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.3e-47 195.3 542 33.4
HPP92_001646 Vanilla planifolia HOM05D003850 ORTHO05D004515 3.8e-47 193.7 280 51.1
Lsat_1_v5_gn_5_64561 Lactuca sativa HOM05D003952 ORTHO05D004515 6.4e-39 166.4 212 64.2
Gorai.002G145900 Gossypium raimondii HOM05D003850 ORTHO05D004515 1.9e-35 154.8 211 65.4
HPP92_001645 Vanilla planifolia HOM05D003850 ORTHO05D004515 1.8e-33 148.3 101 70.3
CBR_g38333 Chara braunii HOM05D000019 ORTHO05D000002 4.0e-33 147.1 241 40.7
PSO339G5270 Papaver somniferum HOM05D003850 ORTHO05D004515 4.6e-29 133.7 213 49.8
RcHm_v2.0_Chr6g0288941 Rosa chinensis HOM05D003850 ORTHO05D004515 3.4e-24 117.5 309 34.3
PSO384G4333 Papaver somniferum HOM05D003850 ORTHO05D004515 3.2e-22 110.9 171 51.5
CDE06G0619 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 7.2e-22 109.8 209 48.8
AagrBONN_evm.TU.Sc2ySwM_228.3786 Anthoceros agrestis HOM05D003850 ORTHO05D004515 2.1e-21 108.2 140 42.9
Gohir.D01G119450 Gossypium hirsutum HOM05D003850 ORTHO05D004515 1.8e-20 105.1 124 58.9
TAR629G2548 Trochodendron aralioides HOM05D003850 ORTHO05D004515 1.1e-19 102.4 311 29.6
Lsat_1_v5_gn_3_78300 Lactuca sativa HOM05D002115 ORTHO05D002263 1.6e-18 98.6 56 83.9
VMungo0720G0179 Vigna mungo HOM05D003850 ORTHO05D004515 1.1e-17 95.9 51 84.3
Eucgr.A01650 Eucalyptus grandis HOM05D002251 ORTHO05D004515 1.0e-15 89.4 54 66.7
SEGI_29277 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 1.3e-15 89.0 205 38.0
HPP92_001647 Vanilla planifolia HOM05D003850 ORTHO05D004515 1.4e-14 85.5 106 52.8
CAN.G1186.27 Capsicum annuum HOM05D001620 ORTHO05D005461 2.5e-14 84.7 58 67.2
Nitab4.5_0013082g0020 Nicotiana tabacum HOM05D003850 ORTHO05D004515 4.6e-13 80.5 96 55.2
arahy.Tifrunner.gnm1.ann1.5H9H8Z Arachis hypogaea HOM05D003850 ORTHO05D004515 6.1e-13 80.1 100 55.0
arahy.Tifrunner.gnm1.ann1.N7GRQP Arachis hypogaea HOM05D003850 ORTHO05D004515 7.9e-13 79.7 73 60.3
arahy.Tifrunner.gnm1.ann1.UE8YUV Arachis hypogaea HOM05D003850 ORTHO05D004515 7.9e-13 79.7 73 60.3
arahy.Tifrunner.gnm1.ann1.4A53N1 Arachis hypogaea HOM05D003850 ORTHO05D004515 5.1e-12 77.0 117 47.9
Nitab4.5_0006771g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 2.6e-11 74.7 97 54.6
SEGI_19210 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 1.3e-10 72.4 130 30.8
FAN21G0780 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.7e-10 72.0 212 36.8
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 6.3e-10 70.1 72 54.2
AagrBONN_evm.TU.Sc2ySwM_228.3787 Anthoceros agrestis HOM05D003850 ORTHO05D004515 1.4e-09 68.9 278 30.6
arahy.Tifrunner.gnm1.ann1.GFC3N0 Arachis hypogaea HOM05D003850 ORTHO05D004515 1.1e-06 59.3 93 45.2
Aa31LG9G10030 Aethionema arabicum HOM05D003850 ORTHO05D004515 2.5e-06 58.2 54 61.1


User provided reference genes

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