Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004242g0040 Nicotiana tabacum HOM05D003938 ORTHO05D004759 1.5e-41 172.6 96 100.0
Sc09g0007280 Simmondsia chinensis HOM05D003938 ORTHO05D004759 1.2e-11 73.2 83 51.8
CAN.G943.34 Capsicum annuum HOM05D003938 ORTHO05D004759 1.6e-11 72.8 83 50.6
Nitab4.5_0001749g0120 Nicotiana tabacum HOM05D003938 ORTHO05D004759 1.6e-11 72.8 83 50.6
Nitab4.5_0004242g0030 Nicotiana tabacum HOM05D003938 ORTHO05D004759 1.6e-11 72.8 97 49.5
Nitab4.5_0009317g0010 Nicotiana tabacum HOM05D003938 ORTHO05D004759 1.6e-11 72.8 83 50.6
Solyc07g066420.4 Solanum lycopersicum HOM05D003938 ORTHO05D004759 1.6e-11 72.8 83 50.6
Sopen07g034590 Solanum pennellii HOM05D003938 ORTHO05D004759 1.6e-11 72.8 83 50.6
Peaxi162Scf00452g00848 Petunia axillaris HOM05D003938 ORTHO05D004759 2.8e-11 72.0 83 50.6
Carub.0001s4300 Capsella rubella HOM05D003938 ORTHO05D004759 3.6e-11 71.6 83 50.6
Cc05_g16030 Coffea canephora HOM05D003938 ORTHO05D004759 3.6e-11 71.6 83 50.6
Lj8A187T28 Lonicera japonica HOM05D003938 ORTHO05D004759 4.7e-11 71.2 83 49.4
Manes.06G173850 Manihot esculenta HOM05D003938 ORTHO05D004759 4.7e-11 71.2 83 50.6
AL1G62420 Arabidopsis lyrata HOM05D003938 ORTHO05D004759 6.2e-11 70.9 83 49.4
CSS0000259 Camellia sinensis var. sinensis HOM05D003938 ORTHO05D004759 6.2e-11 70.9 83 49.4
CSS0019207 Camellia sinensis var. sinensis HOM05D003938 ORTHO05D004759 6.2e-11 70.9 83 49.4
Zm00001eb274050 Zea mays HOM05D003938 ORTHO05D004759 6.2e-11 70.9 83 49.4
MELO3C012622.2 Cucumis melo HOM05D003938 ORTHO05D004759 8.1e-11 70.5 83 48.2
CsaV3_7G022770 Cucumis sativus L. HOM05D003938 ORTHO05D004759 8.1e-11 70.5 83 48.2
Dinv19621 Davidia involucrata HOM05D003938 ORTHO05D004759 8.1e-11 70.5 83 48.2
Os06g0670500 Oryza sativa ssp. japonica HOM05D003938 ORTHO05D004759 8.1e-11 70.5 83 49.4
Atru.chr1.190 Acer truncatum HOM05D003938 ORTHO05D004759 1.4e-10 69.7 99 42.4
Actinidia07348 Actinidia chinensis HOM05D003938 ORTHO05D004759 1.4e-10 69.7 83 48.2
AT1G53720 Arabidopsis thaliana HOM05D003938 ORTHO05D004759 1.4e-10 69.7 83 48.2
Thhalv10011414m.g Eutrema salsugineum HOM05D003938 ORTHO05D004759 1.4e-10 69.7 83 47.0
THA.LOC104822756 Tarenaya hassleriana HOM05D003938 ORTHO05D004759 1.4e-10 69.7 83 47.0
Sabra05G0079800 Salix brachista HOM05D003938 ORTHO05D004759 1.8e-10 69.3 83 49.4
CARHR044020 Cardamine hirsuta HOM05D003938 ORTHO05D004759 2.4e-10 68.9 83 47.0
Gohir.D05G003701 Gossypium hirsutum HOM05D003938 ORTHO05D004759 3.1e-10 68.6 97 44.3
Sed0018665 Sechium edule HOM05D003938 ORTHO05D004759 3.1e-10 68.6 83 47.0
CANSAT80G1380 Cannabis sativa HOM05D003938 ORTHO05D004759 4.0e-10 68.2 83 45.8
ECA240G3729 Erigeron canadensis HOM05D003938 ORTHO05D004759 4.0e-10 68.2 81 50.6
HPP92_008853 Vanilla planifolia HOM05D003938 ORTHO05D004759 4.0e-10 68.2 83 47.0
Aa31LG10G170 Aethionema arabicum HOM05D003938 ORTHO05D004759 5.2e-10 67.8 83 47.0
Gohir.A05G003300 Gossypium hirsutum HOM05D003938 ORTHO05D004759 5.2e-10 67.8 83 47.0
Gorai.009G003300 Gossypium raimondii HOM05D003938 ORTHO05D004759 5.2e-10 67.8 83 47.0
Lsat_1_v5_gn_7_71321 Lactuca sativa HOM05D003938 ORTHO05D004759 5.2e-10 67.8 83 47.0
TPR.G22448 Trifolium pratense HOM05D003938 ORTHO05D004759 5.2e-10 67.8 83 47.0
TPR.G9407 Trifolium pratense HOM05D003938 ORTHO05D004759 5.2e-10 67.8 83 47.0
GSVIVG01020281001 Vitis vinifera HOM05D003938 ORTHO05D004759 5.2e-10 67.8 83 47.0
Duzib168G1061 Durio zibethinus HOM05D003938 ORTHO05D004759 6.8e-10 67.4 83 47.0
HanXRQChr05g0160881 Helianthus annuus HOM05D003938 ORTHO05D004759 6.8e-10 67.4 81 49.4
TWI74G0164 Tripterygium wilfordii HOM05D003938 ORTHO05D004759 6.8e-10 67.4 83 47.0
Eucgr.F01467 Eucalyptus grandis HOM05D003938 ORTHO05D004759 8.9e-10 67.0 83 45.8
Lj3g0013935 Lotus japonicus HOM05D003938 ORTHO05D004759 8.9e-10 67.0 83 48.2
Medtr8g442420 Medicago truncatula HOM05D003938 ORTHO05D004759 8.9e-10 67.0 83 48.2
RcHm_v2.0_Chr5g0026161 Rosa chinensis HOM05D003938 ORTHO05D004759 8.9e-10 67.0 83 47.0
SGA_v2.0_scaffold7G03579 Striga asiatica HOM05D003938 ORTHO05D004759 8.9e-10 67.0 83 45.8
CSS0016392 Camellia sinensis var. sinensis HOM05D003938 ORTHO05D004759 1.2e-09 66.6 83 45.8
CiPaw.01G119900 Carya illinoinensis HOM05D003938 ORTHO05D004759 1.2e-09 66.6 83 47.0
AUR62037621 Chenopodium quinoa HOM05D003938 ORTHO05D004759 1.2e-09 66.6 83 45.8
AUR62040863 Chenopodium quinoa HOM05D003938 ORTHO05D004759 1.2e-09 66.6 83 45.8
Ca_12645_v3 Cicer arietinum L. HOM05D003938 ORTHO05D004759 1.2e-09 66.6 83 45.8
Potri.005G097500 Populus trichocarpa HOM05D003938 ORTHO05D004759 1.2e-09 66.6 83 47.0
PGR119G1566 Punica granatum HOM05D003938 ORTHO05D004759 1.2e-09 66.6 83 45.8
Sp1g38950 Schrenkiella parvula HOM05D003938 ORTHO05D004759 1.2e-09 66.6 83 45.8
HPP92_008859 Vanilla planifolia HOM05D003938 ORTHO05D004759 1.2e-09 66.6 83 45.8
CDE01G0219 Ceratophyllum demersum HOM05D003938 ORTHO05D004759 1.5e-09 66.2 83 47.0
Ciclev10004604m.g Citrus clementina HOM05D003938 ORTHO05D004759 1.5e-09 66.2 83 47.0
MSTRG.16112 Avicennia marina HOM05D003938 ORTHO05D004759 2.0e-09 65.9 77 45.5
Medtr6g084140 Medicago truncatula HOM05D003938 ORTHO05D004759 2.0e-09 65.9 83 47.0
PSO675G9176 Papaver somniferum HOM05D003938 ORTHO05D004759 2.0e-09 65.9 81 48.1
PSO717G0129 Papaver somniferum HOM05D003938 ORTHO05D004759 2.0e-09 65.9 81 48.1
Psat4g174120 Pisum sativum HOM05D003938 ORTHO05D004759 2.0e-09 65.9 83 47.0
QL04p077115 Quercus lobata HOM05D003938 ORTHO05D004759 2.0e-09 65.9 83 45.8
Ciclev10007155m.g Citrus clementina HOM05D003938 ORTHO05D004759 2.6e-09 65.5 82 46.3
Nn7g37935 Nelumbo nucifera HOM05D003938 ORTHO05D004759 2.6e-09 65.5 83 47.0
TAR626G0088 Trochodendron aralioides HOM05D003938 ORTHO05D004759 2.6e-09 65.5 77 46.8
arahy.Tifrunner.gnm1.ann1.KA488U Arachis hypogaea HOM05D003938 ORTHO05D004759 3.4e-09 65.1 83 45.8
arahy.Tifrunner.gnm1.ann1.TD7I6F Arachis hypogaea HOM05D003938 ORTHO05D004759 3.4e-09 65.1 83 45.8
Migut.M01560 Erythranthe guttata HOM05D003938 ORTHO05D004759 3.4e-09 65.1 83 45.8
Glyma.19G004200 Glycine max HOM05D003938 ORTHO05D004759 3.4e-09 65.1 83 45.8
MD05G1222400 Malus domestica HOM05D003938 ORTHO05D004759 3.4e-09 65.1 83 45.8
MD10G1204000 Malus domestica HOM05D003938 ORTHO05D004759 3.4e-09 65.1 83 45.8
Phvul.011G177175 Phaseolus vulgaris HOM05D003938 ORTHO05D004759 3.4e-09 65.1 81 46.9
Prupe.4G137900 Prunus persica HOM05D003938 ORTHO05D004759 3.4e-09 65.1 83 45.8
unitig_26.g10081 Utricularia gibba HOM05D003938 ORTHO05D004759 3.4e-09 65.1 83 44.6
FAN16G1651 Fragaria x ananassa HOM05D003938 ORTHO05D004759 4.4e-09 64.7 83 45.8
FAN21G1947 Fragaria x ananassa HOM05D003938 ORTHO05D004759 4.4e-09 64.7 83 45.8
FAN25G2080 Fragaria x ananassa HOM05D003938 ORTHO05D004759 4.4e-09 64.7 83 45.8
BcaB04g16924 Brassica carinata HOM05D003938 ORTHO05D004759 5.8e-09 64.3 83 45.8
A08p00110 Brassica napus HOM05D000173 ORTHO05D008065 5.8e-09 64.3 83 45.8
C03p93390 Brassica napus HOM05D003938 ORTHO05D008065 5.8e-09 64.3 83 45.8
BolC3t21636H Brassica oleracea HOM05D003938 ORTHO05D008065 5.8e-09 64.3 83 45.8
BraA08t32068Z Brassica rapa HOM05D003938 ORTHO05D008065 5.8e-09 64.3 83 45.8
FvH4_3g15530 Fragaria vesca HOM05D003938 ORTHO05D004759 9.9e-09 63.5 83 44.6
FAN11G2591 Fragaria x ananassa HOM05D003938 ORTHO05D004759 9.9e-09 63.5 83 44.6
Aqoxy3G04185_Aqoxy3G04186 Aquilegia oxysepala HOM05D003938 ORTHO05D004759 1.7e-08 62.8 81 46.9
Glyma.15G213200 Glycine max HOM05D003938 ORTHO05D004759 1.7e-08 62.8 83 44.6
Solyc02g061800.2 Solanum lycopersicum HOM05D003938 ORTHO05D004759 1.7e-08 62.8 83 44.6
Sopen02g012840 Solanum pennellii HOM05D003938 ORTHO05D004759 2.2e-08 62.4 83 44.6
AagrBONN_evm.TU.Sc2ySwM_368.1871 Anthoceros agrestis HOM05D003938 ORTHO05D004759 2.9e-08 62.0 77 44.2
ATR0763G204 Amborella trichopoda HOM05D003938 ORTHO05D004759 3.8e-08 61.6 93 37.6
Lalb_Chr01g0007211 Lupinus albus HOM05D003938 ORTHO05D004759 3.8e-08 61.6 83 43.4
PGSC0003DMG400004370 Solanum tuberosum HOM05D003938 ORTHO05D004759 3.8e-08 61.6 83 44.6
EL10Ac6g14412 Beta vulgaris HOM05D003938 ORTHO05D004759 6.4e-08 60.8 75 45.3
Solyc12g049430.1 Solanum lycopersicum HOM05D003938 ORTHO05D004759 1.1e-07 60.1 83 43.4
Sopen12g031080 Solanum pennellii HOM05D003938 ORTHO05D004759 1.1e-07 60.1 83 42.2
PGSC0003DMG400017036 Solanum tuberosum HOM05D003938 ORTHO05D004759 1.1e-07 60.1 82 46.3
Mapoly0010s0175 Marchantia polymorpha HOM05D003938 ORTHO05D004759 1.4e-07 59.7 81 45.7
Sopen12g023920 Solanum pennellii HOM05D003938 ORTHO05D004759 1.9e-07 59.3 83 42.2
SMO351G0536 Selaginella moellendorffii HOM05D003938 ORTHO05D004759 3.2e-07 58.5 71 46.5
Pp3c1_5600 Physcomitrium patens HOM05D003938 ORTHO05D004759 1.2e-06 56.6 55 56.4
EL10Ac6g14407 Beta vulgaris HOM05D003938 ORTHO05D004759 2.1e-06 55.8 80 42.5
Solyc12g038120.3 Solanum lycopersicum HOM05D003938 ORTHO05D004759 2.1e-06 55.8 83 42.2
PGSC0003DMG400004369 Solanum tuberosum HOM05D003938 ORTHO05D004759 2.1e-06 55.8 82 43.9
Carub.0008s0543 Capsella rubella HOM05D003938 ORTHO05D004759 3.5e-06 55.1 83 42.2
Solyc12g038020.3 Solanum lycopersicum HOM05D003938 ORTHO05D004759 7.8e-06 53.9 98 35.7
Sopen12g023950 Solanum pennellii HOM05D003938 ORTHO05D004759 7.8e-06 53.9 82 41.5


User provided reference genes

Program Settings