Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001659g0150 Nicotiana tabacum HOM05D006329 ORTHO05D008357 1.6e-233 812.4 416 100.0
Nitab4.5_0001450g0040 Nicotiana tabacum HOM05D006329 ORTHO05D008357 5.4e-229 797.3 416 97.4
Solyc11g008360.3 Solanum lycopersicum HOM05D006329 ORTHO05D008357 7.4e-194 680.6 416 85.6
PGSC0003DMG400007434 Solanum tuberosum HOM05D006329 ORTHO05D008357 6.3e-193 677.6 415 85.8
Peaxi162Scf00145g01311 Petunia axillaris HOM05D006329 ORTHO05D008357 1.0e-171 607.1 372 86.3
Cc02_g10940 Coffea canephora HOM05D006329 ORTHO05D008357 2.0e-167 592.8 415 75.2
Actinidia34805 Actinidia chinensis HOM05D006329 ORTHO05D008357 3.2e-165 585.5 408 74.0
Hma1.2p1_2894F.1_g329960 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 3.8e-158 562.0 409 71.4
Migut.F01702 Erythranthe guttata HOM05D006329 ORTHO05D008357 9.5e-157 557.4 413 69.5
MSTRG.389 Avicennia marina HOM05D006329 ORTHO05D008357 3.6e-156 555.4 401 70.6
SalBow6G7241 Salvia bowleyana HOM05D006329 ORTHO05D008357 3.6e-156 555.4 405 70.6
Sopen11g004170 Solanum pennellii HOM05D006329 ORTHO05D008357 5.2e-155 551.6 299 92.0
Oeu013841.1 Olea europaea HOM05D006329 ORTHO05D008357 5.0e-150 535.0 392 72.2
QL08p054507 Quercus lobata HOM05D006329 ORTHO05D008357 7.3e-149 531.2 411 70.1
Atru.chr12.838 Acer truncatum HOM05D003507 ORTHO05D008357 3.6e-148 528.9 368 72.0
Sabra08G0023700 Salix brachista HOM05D006329 ORTHO05D008357 4.7e-148 528.5 400 68.0
Thecc.10G083200 Theobroma cacao HOM05D006329 ORTHO05D008357 8.0e-148 527.7 377 70.3
TAR623G1379 Trochodendron aralioides HOM05D006329 ORTHO05D008357 1.8e-147 526.6 415 68.4
QL08p054383 Quercus lobata HOM05D006329 ORTHO05D008357 2.3e-147 526.2 411 69.6
Nn6g35280 Nelumbo nucifera HOM05D006329 ORTHO05D008357 1.5e-146 523.5 376 72.1
Ciclev10031516m.g Citrus clementina HOM05D006329 ORTHO05D008357 2.0e-146 523.1 371 71.7
Sed0004104 Sechium edule HOM05D006329 ORTHO05D008357 2.6e-146 522.7 370 72.4
Gohir.A10G203300 Gossypium hirsutum HOM05D006329 ORTHO05D008357 3.4e-146 522.3 375 70.4
Potri.008G035500 Populus trichocarpa HOM05D006329 ORTHO05D008357 3.4e-146 522.3 402 67.2
COL.COLO4_17136 Corchorus olitorius HOM05D006329 ORTHO05D008357 4.4e-146 521.9 404 67.6
RcHm_v2.0_Chr1g0362601 Rosa chinensis HOM05D006329 ORTHO05D008357 4.4e-146 521.9 408 67.2
Gohir.D10G211400 Gossypium hirsutum HOM05D006329 ORTHO05D008357 5.7e-146 521.5 375 69.9
Gorai.011G237100 Gossypium raimondii HOM05D006329 ORTHO05D008357 5.7e-146 521.5 375 69.9
Rhsim09G0148200 Rhododendron simsii HOM05D000461 ORTHO05D001829 2.2e-145 519.6 429 66.4
Manes.05G201000 Manihot esculenta HOM05D006329 ORTHO05D008357 1.1e-144 517.3 419 65.4
CSS0005771 Camellia sinensis var. sinensis HOM05D006329 ORTHO05D008357 2.4e-144 516.2 409 68.5
Aqoxy1G01144 Aquilegia oxysepala HOM05D006329 ORTHO05D008357 3.2e-144 515.8 417 66.7
THA.LOC104824234 Tarenaya hassleriana HOM05D006329 ORTHO05D008357 9.2e-144 514.2 380 67.9
MD07G1170000 Malus domestica HOM05D006329 ORTHO05D008357 1.2e-143 513.8 408 67.6
PGR142G3823 Punica granatum HOM05D006329 ORTHO05D008357 3.5e-143 512.3 403 66.5
BcaB02g09141 Brassica carinata HOM05D006329 ORTHO05D008357 1.0e-142 510.8 409 65.5
Duzib114G0755 Durio zibethinus HOM05D006329 ORTHO05D008357 1.0e-142 510.8 374 69.0
Thhalv10016747m.g Eutrema salsugineum HOM05D006329 ORTHO05D008357 1.3e-142 510.4 418 63.9
FAN10G3782 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.3e-142 510.4 408 67.6
SGA_v2.0_scaffold51G18714 Striga asiatica HOM05D006329 ORTHO05D008357 3.0e-142 509.2 386 69.2
FvH4_7g18810 Fragaria vesca HOM05D006329 ORTHO05D008357 8.6e-142 507.7 407 67.8
AL4G36440 Arabidopsis lyrata HOM05D006329 ORTHO05D008357 3.3e-141 505.8 423 63.6
MELO3C019822.2 Cucumis melo HOM05D006329 ORTHO05D008357 5.6e-141 505.0 329 76.3
Eucgr.G02867 Eucalyptus grandis HOM05D006329 ORTHO05D008357 2.1e-140 503.1 334 73.1
FAN06G3910 Fragaria x ananassa HOM05D006329 ORTHO05D008357 2.8e-140 502.7 407 67.3
FAN10G0068 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.4e-139 500.4 411 66.4
AT2G39140 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 3.1e-139 499.2 422 62.6
CsaV3_6G036680 Cucumis sativus L. HOM05D006329 ORTHO05D008357 3.1e-139 499.2 329 75.7
arahy.Tifrunner.gnm1.ann1.KFTR8M Arachis hypogaea HOM05D006329 ORTHO05D008357 4.0e-139 498.8 421 64.8
Carub.0004s2119 Capsella rubella HOM05D006329 ORTHO05D008357 4.0e-139 498.8 417 62.8
Sp4g21490 Schrenkiella parvula HOM05D006329 ORTHO05D008357 4.0e-139 498.8 420 61.7
CANSAT56G2601 Cannabis sativa HOM05D006329 ORTHO05D008357 5.8e-138 495.0 338 71.9
CARHR133910 Cardamine hirsuta HOM05D006329 ORTHO05D008357 5.8e-138 495.0 426 61.0
vmacro04842 Vaccinium macrocarpon HOM05D006329 ORTHO05D008357 5.8e-138 495.0 431 63.8
CAN.G321.64 Capsicum annuum HOM05D006329 ORTHO05D008357 4.9e-137 491.9 264 92.0
CiPaw.01G268700 Carya illinoinensis HOM05D006329 ORTHO05D008357 8.3e-137 491.1 325 73.8
Prupe.2G208900 Prunus persica HOM05D006329 ORTHO05D008357 2.4e-136 489.6 403 66.0
ClCG08G007690 Citrullus lanatus HOM05D006329 ORTHO05D008357 9.2e-136 487.6 309 78.0
Glyma.10G207800 Glycine max HOM05D006329 ORTHO05D008357 2.7e-135 486.1 420 63.8
Haze_16856 Corylus avellana HOM05D006329 ORTHO05D008357 1.0e-134 484.2 342 69.0
Cpa.g.sc53.128 Carica papaya HOM05D006329 ORTHO05D008357 1.7e-134 483.4 333 72.4
A05p07160 Brassica napus HOM05D006329 ORTHO05D008357 2.3e-134 483.0 410 62.2
BraA05t19681Z Brassica rapa HOM05D006329 ORTHO05D008357 6.6e-134 481.5 410 61.7
MBI18_g02633_MAGBIO Magnolia biondii HOM05D006329 ORTHO05D008357 6.6e-134 481.5 402 63.2
Phvul.007G098900 Phaseolus vulgaris HOM05D006329 ORTHO05D008357 9.5e-133 477.6 377 66.8
GSVIVG01016221001 Vitis vinifera HOM05D006329 ORTHO05D008357 1.6e-132 476.9 294 78.9
FAN06G0494 Fragaria x ananassa HOM05D006329 ORTHO05D008357 2.8e-132 476.1 412 64.6
CDE03G0204 Ceratophyllum demersum HOM05D006329 ORTHO05D008357 3.6e-132 475.7 393 64.6
PSO063G6532 Papaver somniferum HOM05D006329 ORTHO05D008357 3.6e-132 475.7 371 66.6
Ca_10544_v3 Cicer arietinum L. HOM05D006329 ORTHO05D008357 4.7e-132 475.3 403 63.0
DCAR_005490 Daucus carota HOM05D006329 ORTHO05D008357 4.7e-132 475.3 377 67.6
arahy.Tifrunner.gnm1.ann1.21BGD2 Arachis hypogaea HOM05D006329 ORTHO05D008357 4.0e-131 472.2 411 63.5
PSO339G5012 Papaver somniferum HOM05D006329 ORTHO05D008357 4.0e-131 472.2 404 62.9
Psat6g180040 Pisum sativum HOM05D006329 ORTHO05D008357 1.5e-130 470.3 408 61.5
Ah.02g128110 Amaranthus hybridus HOM05D006329 ORTHO05D008357 3.4e-130 469.2 344 68.0
Medtr1g094190 Medicago truncatula HOM05D006329 ORTHO05D008357 3.4e-130 469.2 414 61.6
TPR.G10288 Trifolium pratense HOM05D006329 ORTHO05D008357 7.5e-130 468.0 411 62.0
BolC4t22452H Brassica oleracea HOM05D006329 ORTHO05D008357 9.8e-130 467.6 331 68.6
EL10Ac6g14260 Beta vulgaris HOM05D006329 ORTHO05D008357 1.3e-129 467.2 312 72.1
BcaC02g12042 Brassica carinata HOM05D006329 ORTHO05D008357 1.3e-129 467.2 332 68.4
C04p08570 Brassica napus HOM05D006329 ORTHO05D008357 1.3e-129 467.2 332 68.4
FAN03G2323 Fragaria x ananassa HOM05D003507 ORTHO05D004324 6.4e-129 464.9 312 74.7
Lsat_1_v5_gn_2_113040 Lactuca sativa HOM05D006329 ORTHO05D008357 6.4e-129 464.9 406 63.1
HanXRQChr14g0456591 Helianthus annuus HOM05D006329 ORTHO05D008357 8.3e-129 464.5 336 71.4
Lj5g0015116 Lotus japonicus HOM05D006329 ORTHO05D008357 2.4e-128 463.0 347 68.6
Lalb_Chr21g0313671 Lupinus albus HOM05D006329 ORTHO05D008357 1.2e-124 450.7 352 64.8
ATR0219G015 Amborella trichopoda HOM05D006329 ORTHO05D008357 4.7e-124 448.7 354 66.1
Lj3A938T44 Lonicera japonica HOM05D006329 ORTHO05D008357 6.2e-124 448.4 392 66.1
EL10Ac4g09587 Beta vulgaris HOM05D006329 ORTHO05D008357 1.2e-122 444.1 328 67.7
Dinv31231 Davidia involucrata HOM05D006329 ORTHO05D008357 2.0e-122 443.4 332 72.0
RhsimUnG0185600 Rhododendron simsii HOM05D000461 ORTHO05D001829 4.4e-122 442.2 388 64.7
HPP92_026018 Vanilla planifolia HOM05D006329 ORTHO05D008357 1.6e-119 433.7 362 64.9
Cfa001679 Carpinus fangiana HOM05D006329 ORTHO05D008357 1.7e-118 430.3 283 72.1
Hund20700 Selenicereus undatus HOM05D006329 ORTHO05D008357 7.3e-117 424.9 483 50.9
Zm00001eb004240 Zea mays HOM05D006329 ORTHO05D008357 9.6e-117 424.5 419 55.4
ECA238G1295 Erigeron canadensis HOM05D006329 ORTHO05D001676 8.1e-116 421.4 248 81.9
VMungo0251G3605 Vigna mungo HOM05D006329 ORTHO05D008357 4.4e-114 415.6 321 67.3
HPP92_027741 Vanilla planifolia HOM05D006329 ORTHO05D008357 1.5e-109 400.6 309 67.6
AUR62002759 Chenopodium quinoa HOM05D006329 ORTHO05D008357 2.8e-108 396.4 372 58.9
Os03g0152700 Oryza sativa ssp. japonica HOM05D006329 ORTHO05D008357 8.7e-102 374.8 346 57.5
Aa31LG5G20460 Aethionema arabicum HOM05D006329 ORTHO05D008357 1.6e-95 354.0 376 54.0
Mapoly0002s0007 Marchantia polymorpha HOM05D006329 ORTHO05D008357 3.5e-95 352.8 267 62.5
Lalb_Chr21g0313541 Lupinus albus HOM05D006329 ORTHO05D008357 8.7e-94 348.2 209 76.6
Pp3c7_13640 Physcomitrium patens HOM05D006329 ORTHO05D008357 4.6e-87 325.9 289 57.1
Cfa001678 Carpinus fangiana HOM05D006329 ORTHO05D008357 8.7e-86 321.6 222 70.7
SMO329G0071 Selaginella moellendorffii HOM05D006329 ORTHO05D008357 6.9e-83 312.0 252 59.5
Sc09g0006060 Simmondsia chinensis HOM05D006329 ORTHO05D008357 6.9e-83 312.0 289 60.6
FAN01G2166 Fragaria x ananassa HOM05D006329 ORTHO05D008357 9.4e-72 275.0 192 74.0
HPP92_026744 Vanilla planifolia HOM05D006329 ORTHO05D008357 4.8e-68 262.7 258 57.8
MCO14G528 Micromonas commoda HOM05D006329 ORTHO05D008357 1.1e-56 224.9 256 47.7
CBR_g29624 Chara braunii HOM05D006329 ORTHO05D008357 3.1e-51 206.8 162 61.1
AUR62014125 Chenopodium quinoa HOM05D006329 ORTHO05D008357 2.7e-50 203.8 152 67.8
PRCOL_00004574 Prasinoderma coloniale HOM05D006329 ORTHO05D008357 1.8e-46 191.0 253 44.3
Cre02.g095121 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 2.3e-46 190.7 324 37.3
CAN.G176.13 Capsicum annuum HOM05D006329 ORTHO05D033978 1.7e-36 157.9 83 90.4
Hma1.2p1_2894F.1_g329970 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 1.3e-33 148.3 82 84.1
Pp3s196_90 Physcomitrium patens HOM05D006329 ORTHO05D008357 2.7e-26 124.0 247 30.4
AT3G43340 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 2.5e-24 117.5 73 72.6
Hma1.2p1_2894F.1_g329973 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 1.1e-19 102.1 57 82.5
CAN.G184.4 Capsicum annuum HOM05D006329 ORTHO05D028485 1.7e-17 94.7 68 67.6
Cre07.g323550 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 8.6e-17 92.4 249 28.5
Glyma.20G182966 Glycine max HOM05D006329 ORTHO05D028485 3.3e-16 90.5 88 51.1
MCO04G216 Micromonas commoda HOM05D006329 ORTHO05D008357 4.4e-13 80.1 260 28.1
MCO01G641 Micromonas commoda HOM05D006329 ORTHO05D008357 3.7e-12 77.0 235 29.4
Potri.010G226901 Populus trichocarpa HOM05D006329 ORTHO05D028485 3.7e-12 77.0 51 74.5
Lalb_Chr21g0313531 Lupinus albus HOM05D006329 ORTHO05D008357 2.4e-06 57.8 101 41.6


User provided reference genes

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