Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001453g0090 Nicotiana tabacum HOM05D006129 ORTHO05D007446 0.0e+00 1638.2 819 100.0
Nitab4.5_0007303g0010 Nicotiana tabacum HOM05D006129 ORTHO05D007446 0.0e+00 1423.7 814 88.8
Peaxi162Scf00789g00530 Petunia axillaris HOM05D006129 ORTHO05D007446 0.0e+00 1273.8 825 79.2
Solyc11g066850.3 Solanum lycopersicum HOM05D006129 ORTHO05D007446 0.0e+00 1213.0 801 77.5
CAN.G644.34 Capsicum annuum HOM05D006129 ORTHO05D007446 0.0e+00 1179.9 730 81.6
PGSC0003DMG400026525 Solanum tuberosum HOM05D006129 ORTHO05D007446 0.0e+00 1099.3 686 80.8
Sopen11g026560 Solanum pennellii HOM05D006129 ORTHO05D007446 0.0e+00 1085.5 689 80.0
Dinv42121 Davidia involucrata HOM05D006129 ORTHO05D007446 2.2e-298 1028.9 829 64.2
Lj5P206T15 Lonicera japonica HOM05D006129 ORTHO05D007446 1.5e-291 1006.1 832 62.1
CSS0025307 Camellia sinensis var. sinensis HOM05D006129 ORTHO05D007446 4.3e-286 988.0 829 61.8
CSS0048591 Camellia sinensis var. sinensis HOM05D006129 ORTHO05D007446 4.3e-286 988.0 829 61.8
GSVIVG01031785001 Vitis vinifera HOM05D006129 ORTHO05D007446 2.2e-282 975.7 822 60.3
Duzib248G0151 Durio zibethinus HOM05D006129 ORTHO05D007446 2.1e-280 969.1 794 62.5
QL11p038411 Quercus lobata HOM05D006129 ORTHO05D007446 2.5e-278 962.2 828 60.3
Haze_01881 Corylus avellana HOM05D006129 ORTHO05D007446 3.1e-276 955.3 810 59.9
Thecc.02G095400 Theobroma cacao HOM05D006129 ORTHO05D007446 4.0e-276 954.9 761 63.5
TWI79G0519 Tripterygium wilfordii HOM05D006129 ORTHO05D007446 2.0e-275 952.6 813 60.1
CiPaw.05G055300 Carya illinoinensis HOM05D006129 ORTHO05D007446 3.4e-275 951.8 817 60.3
TWI31G0609 Tripterygium wilfordii HOM05D006129 ORTHO05D007446 4.4e-275 951.4 812 59.7
vmacro02172 Vaccinium macrocarpon HOM05D006129 ORTHO05D007446 4.9e-274 948.0 814 60.6
Nn4g23272 Nelumbo nucifera HOM05D006129 ORTHO05D007446 6.4e-274 947.6 742 63.3
Cfa005424 Carpinus fangiana HOM05D006129 ORTHO05D007446 4.1e-273 944.9 811 59.3
Dinv23594 Davidia involucrata HOM05D006129 ORTHO05D007446 7.1e-273 944.1 794 60.6
COL.COLO4_11724 Corchorus olitorius HOM05D006129 ORTHO05D007446 3.9e-271 938.3 768 62.2
RcHm_v2.0_Chr6g0259211 Rosa chinensis HOM05D006129 ORTHO05D007446 6.8e-268 927.5 806 57.8
CANSAT25G2181 Cannabis sativa HOM05D006129 ORTHO05D007446 3.8e-266 921.8 815 57.1
DCAR_003623 Daucus carota HOM05D006129 ORTHO05D007446 1.4e-265 919.8 792 59.1
Rhsim11G0169300 Rhododendron simsii HOM05D006129 ORTHO05D007446 2.4e-265 919.1 743 62.4
Oeu057674.1 Olea europaea HOM05D006129 ORTHO05D007446 3.2e-265 918.7 808 59.5
Cpa.g.sc62.53 Carica papaya HOM05D006129 ORTHO05D007446 7.1e-265 917.5 841 57.9
Gohir.D01G006000 Gossypium hirsutum HOM05D006129 ORTHO05D007446 1.0e-263 913.7 805 58.9
MD10G1089000 Malus domestica HOM05D006129 ORTHO05D007446 8.7e-263 910.6 790 57.7
Gorai.002G007000 Gossypium raimondii HOM05D006129 ORTHO05D007446 3.3e-262 908.7 792 59.2
Gohir.A01G005900 Gossypium hirsutum HOM05D006129 ORTHO05D007446 2.8e-261 905.6 785 59.4
Potri.009G106800 Populus trichocarpa HOM05D006129 ORTHO05D007446 3.1e-260 902.1 823 57.4
Manes.17G094600 Manihot esculenta HOM05D006129 ORTHO05D007446 4.0e-260 901.7 831 56.7
Atru.BG.82.p Acer truncatum HOM05D006129 ORTHO05D007446 9.0e-260 900.6 689 63.0
Sc08g0000140 Simmondsia chinensis HOM05D006129 ORTHO05D007446 2.0e-259 899.4 794 57.8
FAN27G0179 Fragaria x ananassa HOM05D006129 ORTHO05D007446 5.8e-259 897.9 751 58.6
Aqoxy3G03484 Aquilegia oxysepala HOM05D006129 ORTHO05D007446 2.4e-257 892.5 813 56.8
FvH4_2g06900 Fragaria vesca HOM05D006129 ORTHO05D007446 2.7e-256 889.0 762 57.5
Lj2g0010354 Lotus japonicus HOM05D006129 ORTHO05D007446 1.3e-255 886.7 731 60.3
TAR371G0476 Trochodendron aralioides HOM05D006129 ORTHO05D007446 2.3e-255 885.9 741 61.8
Prupe.8G116000 Prunus persica HOM05D006129 ORTHO05D007446 3.9e-255 885.2 803 56.2
MSTRG.20134 Avicennia marina HOM05D006129 ORTHO05D007446 6.6e-255 884.4 796 57.5
FAN24G2628 Fragaria x ananassa HOM05D006129 ORTHO05D007446 1.1e-254 883.6 758 57.4
Ciclev10027854m.g Citrus clementina HOM05D006129 ORTHO05D007446 2.5e-254 882.5 777 56.8
FAN15G2181 Fragaria x ananassa HOM05D006129 ORTHO05D007446 4.3e-254 881.7 780 56.7
ClCG07G001810 Citrullus lanatus HOM05D006129 ORTHO05D007446 7.3e-254 880.9 800 56.4
Actinidia12976 Actinidia chinensis HOM05D006129 ORTHO05D007446 1.3e-253 880.2 812 57.3
Migut.B00306 Erythranthe guttata HOM05D006129 ORTHO05D007446 1.1e-252 877.1 792 56.4
Lalb_Chr10g0095451 Lupinus albus HOM05D006129 ORTHO05D007446 1.4e-252 876.7 803 55.8
Medtr1g026035 Medicago truncatula HOM05D006129 ORTHO05D007446 4.0e-252 875.2 787 56.5
MELO3C026699.2 Cucumis melo HOM05D006129 ORTHO05D007446 5.3e-252 874.8 808 55.9
THA.LOC104807348 Tarenaya hassleriana HOM05D006129 ORTHO05D007446 9.9e-251 870.5 715 60.4
Sed0004701 Sechium edule HOM05D006129 ORTHO05D007446 7.1e-249 864.4 793 55.6
Glyma.07G178800 Glycine max HOM05D006129 ORTHO05D007446 1.2e-248 863.6 718 58.2
Ca_13480_v3 Cicer arietinum L. HOM05D006129 ORTHO05D007446 3.5e-248 862.1 807 55.0
Eucgr.L01320 Eucalyptus grandis HOM05D006129 ORTHO05D007446 6.0e-248 861.3 834 55.4
Lsat_1_v5_gn_5_113460 Lactuca sativa HOM05D006129 ORTHO05D007446 6.0e-248 861.3 821 55.7
CsaV3_3G028800 Cucumis sativus L. HOM05D006129 ORTHO05D007446 3.0e-247 859.0 816 54.5
Glyma.20G009700 Glycine max HOM05D006129 ORTHO05D007446 3.0e-247 859.0 709 58.5
TPR.G26422 Trifolium pratense HOM05D006129 ORTHO05D007446 6.7e-247 857.8 731 58.0
PGR042G1055 Punica granatum HOM05D006129 ORTHO05D007446 8.7e-247 857.4 805 56.1
ECA234G4125 Erigeron canadensis HOM05D006129 ORTHO05D007446 5.6e-246 854.7 810 54.9
HanXRQChr10g0303221 Helianthus annuus HOM05D006129 ORTHO05D007446 1.7e-242 843.2 829 54.4
Phvul.002G308800 Phaseolus vulgaris HOM05D006129 ORTHO05D007446 4.9e-242 841.6 718 57.2
EL10Ac9g21818 Beta vulgaris HOM05D006129 ORTHO05D007446 3.2e-241 839.0 797 51.9
VMungo0464G0688 Vigna mungo HOM05D006129 ORTHO05D007446 9.3e-241 837.4 723 56.2
unitig_744.g24241 Utricularia gibba HOM05D006129 ORTHO05D007446 5.1e-239 831.6 801 52.6
arahy.Tifrunner.gnm1.ann1.769PPM Arachis hypogaea HOM05D006129 ORTHO05D007446 2.5e-238 829.3 734 57.1
Thhalv10022548m.g Eutrema salsugineum HOM05D006129 ORTHO05D007446 4.8e-237 825.1 815 52.5
Carub.0003s2972 Capsella rubella HOM05D006129 ORTHO05D007446 1.1e-236 823.9 813 52.3
A07p04960 Brassica napus HOM05D006129 ORTHO05D007446 1.8e-236 823.2 782 53.6
AUR62011424 Chenopodium quinoa HOM05D006129 ORTHO05D007446 2.4e-236 822.8 783 52.6
AL3G47590 Arabidopsis lyrata HOM05D006129 ORTHO05D007446 2.0e-235 819.7 819 52.5
CARHR106180 Cardamine hirsuta HOM05D006129 ORTHO05D007446 1.3e-234 817.0 814 51.8
BraA07t28289Z Brassica rapa HOM05D006129 ORTHO05D007446 2.2e-234 816.2 782 53.3
Sp3g29130 Schrenkiella parvula HOM05D006129 ORTHO05D007446 3.8e-234 815.5 791 53.4
BcaB03g16332 Brassica carinata HOM05D006129 ORTHO05D007446 9.3e-233 810.8 686 56.9
BcaC06g36090 Brassica carinata HOM05D006129 ORTHO05D007446 4.6e-232 808.5 686 56.3
C07p07940 Brassica napus HOM05D006129 ORTHO05D007446 4.6e-232 808.5 686 56.3
BolC7t41212H Brassica oleracea HOM05D006129 ORTHO05D007446 4.6e-232 808.5 686 56.3
SGA_v2.0_scaffold58G20604 Striga asiatica HOM05D006129 ORTHO05D007446 5.1e-231 805.1 814 51.7
AT2G15820 Arabidopsis thaliana HOM05D006129 ORTHO05D007446 7.4e-230 801.2 824 51.0
Aa31LG8G13380 Aethionema arabicum HOM05D006129 ORTHO05D007446 2.7e-224 782.7 785 52.6
Ah.01g006750 Amaranthus hybridus HOM05D006129 ORTHO05D007446 6.1e-224 781.6 791 49.8
AUR62016636 Chenopodium quinoa HOM05D006129 ORTHO05D007446 1.1e-217 760.8 699 53.9
Os02g0702000 Oryza sativa ssp. japonica HOM05D006129 ORTHO05D007446 2.5e-217 759.6 705 52.2
FAN20G2787 Fragaria x ananassa HOM05D006129 ORTHO05D007446 7.2e-217 758.1 623 60.0
ATR0665G475 Amborella trichopoda HOM05D006129 ORTHO05D007446 3.7e-213 745.7 723 51.6
Zm00001eb251880 Zea mays HOM05D006129 ORTHO05D007446 9.4e-209 731.1 722 51.4
TAR629G1168 Trochodendron aralioides HOM05D006129 ORTHO05D007446 2.7e-208 729.6 551 64.1
HPP92_022045 Vanilla planifolia HOM05D006129 ORTHO05D007446 5.7e-206 721.8 772 48.3
Sabra09G0081600 Salix brachista HOM05D006129 ORTHO05D007446 1.8e-204 716.8 595 60.8
Medtr0381s0010 Medicago truncatula HOM05D006129 ORTHO05D007446 2.0e-198 696.8 615 56.9
Eucgr.G01504 Eucalyptus grandis HOM05D006129 ORTHO05D007446 1.5e-185 654.1 790 47.1
SEGI_31419 Sequoiadendron giganteum HOM05D006129 ORTHO05D007446 5.2e-167 592.4 708 43.5
Eucgr.L00820 Eucalyptus grandis HOM05D006129 ORTHO05D007446 1.1e-164 584.7 539 56.8
Cc02_g18440 Coffea canephora HOM05D006129 ORTHO05D007446 3.4e-158 563.1 470 60.2
CDE04G1903 Ceratophyllum demersum HOM05D006129 ORTHO05D007446 1.7e-157 560.8 728 42.2
Psat6g001360 Pisum sativum HOM05D006129 ORTHO05D007446 1.2e-155 554.7 716 43.2
Hund00318 Selenicereus undatus HOM05D006129 ORTHO05D007446 1.2e-139 501.5 465 53.5
Atru.chr5.2887 Acer truncatum HOM05D006129 ORTHO05D007446 3.8e-117 426.8 549 44.8
TAR371G0992 Trochodendron aralioides HOM05D006129 ORTHO05D007446 2.8e-112 410.6 522 46.2
QL11p038542 Quercus lobata HOM05D006129 ORTHO05D007446 1.8e-98 364.8 304 60.9
Atru.chr5.2823 Acer truncatum HOM05D006129 ORTHO05D007446 1.1e-95 355.5 518 42.7
TAR371G0058 Trochodendron aralioides HOM05D006129 ORTHO05D007446 3.5e-86 323.9 381 48.3
Pp3c25_10050 Physcomitrium patens HOM05D006129 ORTHO05D007446 8.5e-85 319.3 738 29.7
Atru.chr5.2881 Acer truncatum HOM05D006129 ORTHO05D007446 7.7e-78 296.2 301 50.5
Atru.chr5.2826 Acer truncatum HOM05D006129 ORTHO05D007446 2.9e-77 294.3 419 44.9
SMO356G0628 Selaginella moellendorffii HOM05D006129 ORTHO05D007446 4.3e-68 263.8 744 26.1
AagrBONN_evm.TU.Sc2ySwM_344.1734 Anthoceros agrestis HOM05D006129 ORTHO05D007446 1.8e-63 248.4 677 27.0
Mapoly0036s0055 Marchantia polymorpha HOM05D006129 ORTHO05D007446 3.9e-61 240.7 691 25.9
AagrBONN_evm.TU.Sc2ySwM_344.5085 Anthoceros agrestis HOM05D006129 ORTHO05D007446 2.0e-57 228.4 732 25.7
TAR629G1760 Trochodendron aralioides HOM05D006129 ORTHO05D007446 1.8e-50 205.3 170 58.8
Cc02_g18430 Coffea canephora HOM05D006129 ORTHO05D007446 3.6e-43 181.0 185 50.8
arahy.Tifrunner.gnm1.ann1.SUMB0F Arachis hypogaea HOM05D006129 ORTHO05D007446 5.4e-39 167.2 153 55.6
Pp3c16_23700 Physcomitrium patens HOM05D006129 ORTHO05D007446 3.0e-37 161.4 715 23.6
Atru.chr5.2882 Acer truncatum HOM05D006129 ORTHO05D007446 3.6e-27 127.9 198 38.4
QL11p038477 Quercus lobata HOM05D006129 ORTHO05D007446 7.1e-23 113.6 168 43.5
Atru.chr5.2820 Acer truncatum HOM05D006129 ORTHO05D007446 3.2e-15 88.2 81 53.1
RcHm_v2.0_Chr6g0302241 Rosa chinensis HOM05D006129 ORTHO05D007446 3.0e-13 81.6 61 52.5
CBR_g19584 Chara braunii HOM05D006129 ORTHO05D007446 5.1e-13 80.9 628 17.7
RcHm_v2.0_Chr1g0376021 Rosa chinensis HOM05D006129 ORTHO05D007446 8.1e-11 73.6 51 56.9
RcHm_v2.0_Chr2g0152801 Rosa chinensis HOM05D006129 ORTHO05D007446 1.1e-10 73.2 81 43.2
CBR_g8924 Chara braunii HOM05D006129 ORTHO05D007446 2.0e-09 68.9 272 25.0
TAR371G0388 Trochodendron aralioides HOM05D001464 ORTHO05D002836 3.4e-09 68.2 60 58.3
Sopen01g021730 Solanum pennellii HOM05D001779 ORTHO05D001753 1.6e-06 59.3 387 20.2
ECA236G0552 Erigeron canadensis HOM05D001779 ORTHO05D001753 3.5e-06 58.2 302 23.8
AagrBONN_evm.TU.Sc2ySwM_117.4077 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.6e-06 57.8 263 22.1


User provided reference genes

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