Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001198g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 3.4e-271 937.9 545 100.0
Nitab4.5_0000143g0310 Nicotiana tabacum HOM05D003850 ORTHO05D004515 3.8e-246 854.7 545 93.4
Sopen11g006940 Solanum pennellii HOM05D003850 ORTHO05D004515 2.1e-236 822.4 523 90.6
PGSC0003DMG400013344 Solanum tuberosum HOM05D003850 ORTHO05D004515 3.3e-218 761.9 486 92.0
Solyc11g012150.3 Solanum lycopersicum HOM05D003850 ORTHO05D004515 3.2e-213 745.3 486 90.3
CAN.G1186.28 Capsicum annuum HOM05D003850 ORTHO05D004515 6.5e-198 694.5 554 76.5
Migut.M01390 Erythranthe guttata HOM05D003850 ORTHO05D004515 6.7e-195 684.5 529 77.1
MSTRG.7170 Avicennia marina HOM05D003850 ORTHO05D004515 1.7e-193 679.9 530 77.5
Peaxi162Scf00558g00516 Petunia axillaris HOM05D003850 ORTHO05D004515 9.1e-192 674.1 468 85.0
QL05p069776 Quercus lobata HOM05D003850 ORTHO05D004515 5.2e-187 658.3 529 74.9
CSS0032808 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 3.3e-186 655.6 532 71.4
Nn1g03331 Nelumbo nucifera HOM05D003850 ORTHO05D004515 2.8e-185 652.5 535 73.5
CANSAT56G0590 Cannabis sativa HOM05D003850 ORTHO05D004515 1.6e-183 646.7 532 71.1
Atru.chr1.2461 Acer truncatum HOM05D003850 ORTHO05D004515 6.7e-179 631.3 532 72.0
CSS0007684 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 2.0e-178 629.8 532 69.2
TAR624G0821 Trochodendron aralioides HOM05D003850 ORTHO05D004515 7.5e-178 627.9 534 70.0
SalBow8G5272 Salvia bowleyana HOM05D003850 ORTHO05D004515 9.7e-178 627.5 539 72.2
SGA_v2.0_scaffold4G01878 Striga asiatica HOM05D003850 ORTHO05D004515 1.3e-177 627.1 524 73.7
Aqoxy1G04110 Aquilegia oxysepala HOM05D003850 ORTHO05D004515 2.4e-176 622.9 534 68.5
Ciclev10014841m.g Citrus clementina HOM05D003850 ORTHO05D004515 1.2e-175 620.5 530 70.8
TAR629G2665 Trochodendron aralioides HOM05D003850 ORTHO05D004515 1.2e-175 620.5 533 71.5
Cc09_g00920 Coffea canephora HOM05D003850 ORTHO05D004515 4.5e-175 618.6 531 71.9
Potri.006G009100 Populus trichocarpa HOM05D003850 ORTHO05D004515 8.5e-174 614.4 532 71.2
CiPaw.09G102000 Carya illinoinensis HOM05D003850 ORTHO05D004515 2.5e-173 612.8 533 70.2
Ca_00718_v3 Cicer arietinum L. HOM05D003850 ORTHO05D004515 4.2e-173 612.1 530 67.9
arahy.Tifrunner.gnm1.ann1.C17RPB Arachis hypogaea HOM05D003850 ORTHO05D004515 4.7e-172 608.6 530 68.7
Glyma.09G009900 Glycine max HOM05D003850 ORTHO05D004515 2.6e-170 602.8 527 68.3
Nn1g07354 Nelumbo nucifera HOM05D003850 ORTHO05D004515 5.7e-170 601.7 532 69.9
Oeu002760.2 Olea europaea HOM05D003850 ORTHO05D004515 2.2e-169 599.7 565 66.7
arahy.Tifrunner.gnm1.ann1.IIR6TV Arachis hypogaea HOM05D003850 ORTHO05D004515 1.8e-168 596.7 536 67.7
Duzib160G0220 Durio zibethinus HOM05D003850 ORTHO05D004515 2.4e-168 596.3 546 66.3
Phvul.006G143600 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 5.4e-168 595.1 531 67.2
Eucgr.E03951 Eucalyptus grandis HOM05D003850 ORTHO05D004515 7.0e-168 594.7 534 68.9
THA.LOC104812992 Tarenaya hassleriana HOM05D003850 ORTHO05D004515 1.2e-167 594.0 546 65.9
RhsimUnG0025700 Rhododendron simsii HOM05D003850 ORTHO05D004515 1.7e-166 590.1 578 64.2
RhsimUnG0028500 Rhododendron simsii HOM05D003850 ORTHO05D004515 1.7e-166 590.1 578 64.2
VMungo0540G1287 Vigna mungo HOM05D003850 ORTHO05D004515 3.8e-166 589.0 530 67.0
Thecc.06G232700 Theobroma cacao HOM05D003850 ORTHO05D004515 1.5e-165 587.0 545 65.9
PSO210G4264 Papaver somniferum HOM05D003850 ORTHO05D004515 5.5e-165 585.1 536 66.6
Sed0003006 Sechium edule HOM05D003850 ORTHO05D004515 5.5e-165 585.1 530 66.6
GSVIVG01003352001 Vitis vinifera HOM05D003850 ORTHO05D004515 7.2e-165 584.7 532 68.2
MBI16_g42266_MAGBIO Magnolia biondii HOM05D003850 ORTHO05D004515 1.2e-164 583.9 526 67.3
VMungo1215G3075 Vigna mungo HOM05D003850 ORTHO05D004515 2.8e-164 582.8 532 69.0
ECA233G3046 Erigeron canadensis HOM05D003850 ORTHO05D004515 4.7e-164 582.0 535 72.3
Lalb_Chr20g0119201 Lupinus albus HOM05D003850 ORTHO05D004515 3.4e-162 575.9 553 62.7
TPR.G3343 Trifolium pratense HOM05D003850 ORTHO05D004515 4.1e-160 568.9 553 66.5
unitig_748.g7103 Utricularia gibba HOM05D003850 ORTHO05D004515 2.0e-159 566.6 534 68.7
PGR102G0753 Punica granatum HOM05D003850 ORTHO05D004515 8.6e-158 561.2 530 66.2
CsaV3_3G028740 Cucumis sativus L. HOM05D003850 ORTHO05D004515 9.5e-157 557.8 528 65.0
Manes.07G088900 Manihot esculenta HOM05D003850 ORTHO05D004515 2.8e-156 556.2 527 66.6
arahy.Tifrunner.gnm1.ann1.0C9QHL Arachis hypogaea HOM05D003850 ORTHO05D004515 4.0e-155 552.4 550 63.8
Phvul.003G083500 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 8.9e-155 551.2 532 66.7
Potri.016G015100 Populus trichocarpa HOM05D003850 ORTHO05D004515 8.9e-155 551.2 532 65.8
Actinidia39269 Actinidia chinensis HOM05D003850 ORTHO05D004515 1.2e-154 550.8 358 81.3
arahy.Tifrunner.gnm1.ann1.97WSNQ Arachis hypogaea HOM05D003850 ORTHO05D004515 1.2e-154 550.8 548 61.7
Glyma.15G114200 Glycine max HOM05D003850 ORTHO05D004515 3.4e-154 549.3 529 63.3
COL.COLO4_31876 Corchorus olitorius HOM05D003850 ORTHO05D004515 5.8e-154 548.5 539 62.3
Gohir.A06G153120 Gossypium hirsutum HOM05D003850 ORTHO05D004515 5.8e-154 548.5 544 67.1
Prupe.4G011300 Prunus persica HOM05D003850 ORTHO05D004515 5.8e-154 548.5 528 63.4
Gorai.010G186300 Gossypium raimondii HOM05D003850 ORTHO05D004515 1.3e-153 547.4 544 66.5
ATR0751G086 Amborella trichopoda HOM05D003850 ORTHO05D004515 6.4e-153 545.0 540 65.4
vmacro15772 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 8.3e-153 544.7 544 64.7
Lj2A262G45 Lonicera japonica HOM05D003850 ORTHO05D004515 3.2e-152 542.7 512 68.2
ClCG07G001740 Citrullus lanatus HOM05D003850 ORTHO05D004515 4.1e-152 542.3 528 64.8
Gohir.D06G159600 Gossypium hirsutum HOM05D003850 ORTHO05D004515 1.7e-150 537.0 544 65.8
Medtr2g025590 Medicago truncatula HOM05D003850 ORTHO05D004515 1.9e-149 533.5 528 65.3
AL6G47570 Arabidopsis lyrata HOM05D003850 ORTHO05D004515 4.3e-149 532.3 533 65.7
CiPaw.10G077600 Carya illinoinensis HOM05D003850 ORTHO05D004515 1.2e-148 530.8 484 65.7
Aa31LG9G10040 Aethionema arabicum HOM05D003850 ORTHO05D004515 1.4e-147 527.3 551 63.5
Sabra06G0006900 Salix brachista HOM05D003850 ORTHO05D004515 2.0e-146 523.5 534 62.2
HanXRQChr15g0470091 Helianthus annuus HOM05D003850 ORTHO05D004515 3.4e-146 522.7 518 69.1
PSO302G0165 Papaver somniferum HOM05D003850 ORTHO05D004515 9.8e-146 521.2 536 62.3
AUR62021872 Chenopodium quinoa HOM05D003850 ORTHO05D004515 6.4e-145 518.5 535 59.1
MD05G1357300 Malus domestica HOM05D003850 ORTHO05D004515 9.2e-144 514.6 532 63.3
Cpa.g.sc75.120 Carica papaya HOM05D003850 ORTHO05D004515 1.2e-143 514.2 529 64.1
SEGI_18521 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 2.1e-143 513.5 545 60.6
HPP92_001629 Vanilla planifolia HOM05D003850 ORTHO05D004515 2.1e-143 513.5 531 58.8
vmacro03646 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 7.8e-143 511.5 553 57.0
SHI24464 Sapria himalayana HOM05D003850 ORTHO05D004515 1.7e-142 510.4 530 58.9
AT4G12610 Arabidopsis thaliana HOM05D003850 ORTHO05D004515 5.0e-142 508.8 534 64.2
Oeu044421.3 Olea europaea HOM05D003850 ORTHO05D004515 9.5e-141 504.6 825 44.5
Cfa000110 Carpinus fangiana HOM05D003850 ORTHO05D004515 4.7e-140 502.3 535 62.1
Carub.0006s3188 Capsella rubella HOM05D003850 ORTHO05D004515 2.3e-139 500.0 534 62.7
Sabra16G0017100 Salix brachista HOM05D003850 ORTHO05D004515 7.5e-138 495.0 563 57.2
Haze_08659 Corylus avellana HOM05D003850 ORTHO05D004515 9.9e-138 494.6 568 58.5
TWI63G0294 Tripterygium wilfordii HOM05D003850 ORTHO05D004515 7.1e-136 488.4 511 62.2
C03p36090 Brassica napus HOM05D003850 ORTHO05D004515 3.5e-135 486.1 533 61.5
FvH4_3g01042 Fragaria vesca HOM05D003850 ORTHO05D004515 7.8e-135 485.0 549 59.0
BcaC01g04577 Brassica carinata HOM05D003850 ORTHO05D004515 1.7e-134 483.8 535 61.3
BolC3t15918H Brassica oleracea HOM05D003850 ORTHO05D004515 1.7e-134 483.8 535 61.3
A03p29830 Brassica napus HOM05D003850 ORTHO05D004515 8.6e-134 481.5 533 61.2
BraA09t38246Z Brassica rapa HOM05D003850 ORTHO05D004515 8.6e-134 481.5 534 60.9
CARHR253560 Cardamine hirsuta HOM05D003850 ORTHO05D004515 1.5e-133 480.7 531 61.6
BraA03t12173Z Brassica rapa HOM05D003850 ORTHO05D004515 2.5e-133 479.9 535 60.7
BcaB01g01757 Brassica carinata HOM05D003850 ORTHO05D004515 2.1e-132 476.9 522 60.0
Sabra16G0000900 Salix brachista HOM05D003850 ORTHO05D004515 2.0e-130 470.3 540 53.9
BolC9t56221H Brassica oleracea HOM05D003850 ORTHO05D004515 2.6e-130 469.9 535 59.6
PSO339G3925 Papaver somniferum HOM05D003850 ORTHO05D004515 4.4e-130 469.2 532 57.1
FAN25G3770 Fragaria x ananassa HOM05D003850 ORTHO05D004515 5.8e-130 468.8 574 53.3
BcaB01g02623 Brassica carinata HOM05D003850 ORTHO05D004515 2.9e-129 466.5 521 63.7
Lj6g0013016 Lotus japonicus HOM05D003850 ORTHO05D004515 6.4e-129 465.3 536 61.0
Thhalv10028564m.g Eutrema salsugineum HOM05D003850 ORTHO05D004515 1.1e-128 464.5 528 60.4
Lj4g0025543 Lotus japonicus HOM05D003850 ORTHO05D004515 3.2e-128 463.0 532 57.9
MD10G1331000 Malus domestica HOM05D003850 ORTHO05D004515 4.2e-128 462.6 499 62.9
FAN21G1422 Fragaria x ananassa HOM05D003850 ORTHO05D004515 9.2e-128 461.5 567 56.3
A09p26740 Brassica napus HOM05D003850 ORTHO05D004515 5.1e-126 455.7 526 60.1
RhsimUnG0109100 Rhododendron simsii HOM05D003850 ORTHO05D004515 1.4e-123 447.6 533 54.8
CDE04G2591 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 5.3e-123 445.7 539 60.3
Sp6g04900 Schrenkiella parvula HOM05D003850 ORTHO05D004515 3.4e-122 443.0 531 59.1
Zm00001eb224360 Zea mays HOM05D003850 ORTHO05D004515 3.4e-122 443.0 481 62.4
RcHm_v2.0_Chr5g0001581 Rosa chinensis HOM05D003850 ORTHO05D004515 5.8e-122 442.2 553 54.2
Lsat_1_v5_gn_7_13561 Lactuca sativa HOM05D003850 ORTHO05D004515 2.2e-121 440.3 488 61.7
BcaC04g21251 Brassica carinata HOM05D003850 ORTHO05D004515 2.7e-119 433.3 526 58.4
C09p33830 Brassica napus HOM05D003850 ORTHO05D004515 2.7e-119 433.3 526 58.4
MELO3C012788.2 Cucumis melo HOM05D003850 ORTHO05D004515 1.3e-118 431.0 450 63.6
Rhsim13G0146600 Rhododendron simsii HOM05D003850 ORTHO05D004515 4.8e-116 422.5 587 49.7
Psat1g176560 Pisum sativum HOM05D003850 ORTHO05D004515 1.8e-115 420.6 456 65.4
Hund23984 Selenicereus undatus HOM05D003850 ORTHO05D004515 2.0e-114 417.2 541 54.7
EL10Ac8g20176 Beta vulgaris HOM05D003850 ORTHO05D004515 9.3e-112 408.3 542 57.6
Lj8A171G42 Lonicera japonica HOM05D003850 ORTHO05D004515 1.9e-109 400.6 531 49.9
CDE06G1774 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 8.4e-105 385.2 324 64.2
Duzib235G1223 Durio zibethinus HOM05D003850 ORTHO05D004515 1.4e-104 384.4 405 64.4
Zm00001eb398520 Zea mays HOM05D003850 ORTHO05D004515 7.4e-101 372.1 531 46.7
RcHm_v2.0_Chr5g0007791 Rosa chinensis HOM05D003850 ORTHO05D004515 1.6e-100 370.9 538 51.3
Mapoly0105s0015 Marchantia polymorpha HOM05D003850 ORTHO05D004515 3.7e-100 369.8 550 49.1
Pp3c3_2280 Physcomitrium patens HOM05D003850 ORTHO05D004515 1.1e-99 368.2 542 50.4
Medtr2g025620 Medicago truncatula HOM05D003850 ORTHO05D004515 6.0e-95 352.4 518 52.9
QL09p006300 Quercus lobata HOM05D003850 ORTHO05D004515 3.0e-94 350.1 350 70.3
FvH4_2g22070 Fragaria vesca HOM05D003850 ORTHO05D004515 2.5e-93 347.1 547 44.2
DCAR_025996 Daucus carota HOM05D003850 ORTHO05D004515 1.4e-91 341.3 429 57.1
FAN24G0125 Fragaria x ananassa HOM05D003850 ORTHO05D008045 5.9e-90 335.9 547 43.3
FAN03G2951 Fragaria x ananassa HOM05D003850 ORTHO05D004515 6.5e-89 332.4 538 46.1
AagrBONN_evm.TU.Sc2ySwM_228.4136 Anthoceros agrestis HOM05D003850 ORTHO05D004515 1.4e-88 331.3 354 55.6
FvH4_3g04782 Fragaria vesca HOM05D003850 ORTHO05D004515 5.5e-88 329.3 543 45.7
FAN21G1676 Fragaria x ananassa HOM05D003850 ORTHO05D004515 9.4e-88 328.6 538 45.9
FAN11G3915 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.2e-87 328.2 543 45.3
AUR62012783 Chenopodium quinoa HOM05D003850 ORTHO05D004515 4.6e-87 326.2 415 54.0
FAN16G3024 Fragaria x ananassa HOM05D003850 ORTHO05D004515 3.0e-86 323.6 543 44.9
Dinv07398 Davidia involucrata HOM05D003850 ORTHO05D004515 3.9e-86 323.2 321 70.4
TPR.G13041 Trifolium pratense HOM05D003850 ORTHO05D004515 9.4e-80 302.0 352 65.3
Peaxi162Scf00015g02110 Petunia axillaris HOM05D003850 ORTHO05D004515 1.4e-78 298.1 309 61.5
TPR.G34491 Trifolium pratense HOM05D003850 ORTHO05D004515 5.1e-78 296.2 195 73.8
SEGI_38016 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 4.1e-67 260.0 310 47.7
Sc17g0007710 Simmondsia chinensis HOM05D003850 ORTHO05D004515 5.0e-65 253.1 366 56.6
Actinidia11880 Actinidia chinensis HOM05D003850 ORTHO05D004515 1.4e-59 235.0 339 50.7
HPP92_001646 Vanilla planifolia HOM05D003850 ORTHO05D004515 3.5e-58 230.3 223 65.5
Gorai.002G145900 Gossypium raimondii HOM05D003850 ORTHO05D004515 4.7e-47 193.4 176 74.4
FAN25G2646 Fragaria x ananassa HOM05D003850 ORTHO05D004515 7.5e-45 186.0 495 34.9
Lsat_1_v5_gn_5_64561 Lactuca sativa HOM05D003952 ORTHO05D004515 1.2e-39 168.7 181 60.8
CBR_g38333 Chara braunii HOM05D000019 ORTHO05D000002 2.2e-36 157.9 241 44.4
HPP92_001645 Vanilla planifolia HOM05D003850 ORTHO05D004515 6.0e-34 149.8 101 70.3
Gohir.D01G119450 Gossypium hirsutum HOM05D003850 ORTHO05D004515 8.9e-30 136.0 102 80.4
PSO339G5270 Papaver somniferum HOM05D003850 ORTHO05D004515 1.4e-27 128.6 209 45.0
AagrBONN_evm.TU.Sc2ySwM_228.3786 Anthoceros agrestis HOM05D003850 ORTHO05D004515 6.6e-25 119.8 140 45.0
RcHm_v2.0_Chr6g0288941 Rosa chinensis HOM05D003850 ORTHO05D004515 6.6e-25 119.8 266 40.2
TAR629G2548 Trochodendron aralioides HOM05D003850 ORTHO05D004515 8.6e-25 119.4 313 32.3
PSO384G4333 Papaver somniferum HOM05D003850 ORTHO05D004515 2.1e-23 114.8 142 55.6
CDE06G0619 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 2.2e-20 104.8 207 52.7
Nitab4.5_0013082g0020 Nicotiana tabacum HOM05D003850 ORTHO05D004515 4.9e-20 103.6 88 70.5
Lsat_1_v5_gn_3_78300 Lactuca sativa HOM05D002115 ORTHO05D002263 1.2e-18 99.0 72 69.4
CAN.G1186.27 Capsicum annuum HOM05D001620 ORTHO05D005461 1.7e-17 95.1 58 77.6
Nitab4.5_0006771g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 1.5e-16 92.0 89 68.5
VMungo0720G0179 Vigna mungo HOM05D003850 ORTHO05D004515 8.1e-15 86.3 51 74.5
Eucgr.A01650 Eucalyptus grandis HOM05D002251 ORTHO05D004515 6.8e-14 83.2 54 63.0
arahy.Tifrunner.gnm1.ann1.4A53N1 Arachis hypogaea HOM05D003850 ORTHO05D004515 2.0e-13 81.6 97 51.5
AagrBONN_evm.TU.Sc2ySwM_228.3787 Anthoceros agrestis HOM05D003850 ORTHO05D004515 4.4e-13 80.5 228 35.5
arahy.Tifrunner.gnm1.ann1.5H9H8Z Arachis hypogaea HOM05D003850 ORTHO05D004515 7.6e-13 79.7 106 48.1
arahy.Tifrunner.gnm1.ann1.N7GRQP Arachis hypogaea HOM05D003850 ORTHO05D004515 1.3e-12 79.0 60 65.0
arahy.Tifrunner.gnm1.ann1.UE8YUV Arachis hypogaea HOM05D003850 ORTHO05D004515 1.3e-12 79.0 60 65.0
HPP92_001647 Vanilla planifolia HOM05D003850 ORTHO05D004515 8.4e-12 76.3 101 49.5
SEGI_29277 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 4.6e-10 70.5 212 33.0
arahy.Tifrunner.gnm1.ann1.GFC3N0 Arachis hypogaea HOM05D003850 ORTHO05D004515 6.6e-09 66.6 92 44.6
SEGI_19210 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 1.1e-08 65.9 130 26.9
Nitab4.5_0013082g0030 Nicotiana tabacum HOM05D003850 ORTHO05D004515 9.6e-08 62.8 77 57.1
FAN21G0780 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.3e-07 62.4 207 37.2
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 2.8e-07 61.2 52 55.8
CARHR253550 Cardamine hirsuta HOM05D003850 ORTHO05D004515 3.6e-07 60.8 52 59.6
CBR_g38329 Chara braunii HOM05D003850 ORTHO05D004515 1.4e-06 58.9 87 39.1
Aa31LG9G10030 Aethionema arabicum HOM05D003850 ORTHO05D004515 3.1e-06 57.8 40 70.0
PSO339G0182 Papaver somniferum HOM05D009217 ORTHO05D009626 6.9e-06 56.6 160 37.5


User provided reference genes

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