Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N02118 Erythranthe guttata HOM05D003686 ORTHO05D004322 9.6e-72 273.9 191 100.0
Migut.O00643 Erythranthe guttata HOM05D003686 ORTHO05D004322 2.8e-71 272.3 191 99.5
Sopen06g003610 Solanum pennellii HOM05D003686 ORTHO05D004322 4.8e-39 165.2 202 53.5
PGSC0003DMG400021997 Solanum tuberosum HOM05D003686 ORTHO05D004322 6.3e-39 164.9 202 53.5
Solyc06g008860.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 8.2e-39 164.5 202 53.5
Nitab4.5_0004238g0080 Nicotiana tabacum HOM05D003686 ORTHO05D004322 1.5e-37 160.2 203 52.7
Nitab4.5_0000295g0050 Nicotiana tabacum HOM05D003686 ORTHO05D004322 2.6e-37 159.5 202 53.5
SGA_v2.0_scaffold36G14363 Striga asiatica HOM05D003686 ORTHO05D004322 5.9e-37 158.3 115 72.2
unitig_61.g26148 Utricularia gibba HOM05D003686 ORTHO05D004322 2.9e-36 156.0 109 75.2
CAN.G1006.23 Capsicum annuum HOM05D003686 ORTHO05D004322 1.9e-35 153.3 118 72.0
MSTRG.12592 Avicennia marina HOM05D003686 ORTHO05D004322 3.2e-35 152.5 90 85.6
Oeu022800.1 Olea europaea HOM05D003686 ORTHO05D004322 5.5e-35 151.8 93 86.0
Oeu022802.1 Olea europaea HOM05D003686 ORTHO05D004322 5.5e-35 151.8 93 86.0
SalBow6G6913 Salvia bowleyana HOM05D003686 ORTHO05D004322 9.4e-35 151.0 111 73.9
SalBow8G5349 Salvia bowleyana HOM05D003686 ORTHO05D004322 9.4e-35 151.0 111 73.9
Actinidia00703 Actinidia chinensis HOM05D003686 ORTHO05D004322 2.1e-34 149.8 119 67.2
Cc01_g20160 Coffea canephora HOM05D003686 ORTHO05D004322 1.0e-33 147.5 220 45.9
Glyma.02G152300 Glycine max HOM05D003686 ORTHO05D004322 1.4e-33 147.1 121 66.1
Glyma.10G021900 Glycine max HOM05D003686 ORTHO05D004322 1.4e-33 147.1 121 66.1
Rhsim13G0017700 Rhododendron simsii HOM05D003686 ORTHO05D004322 1.1e-32 144.1 118 68.6
PSO801G0146 Papaver somniferum HOM05D003686 ORTHO05D004322 1.5e-32 143.7 199 60.3
SGA_v2.0_scaffold172G39059 Striga asiatica HOM05D003686 ORTHO05D004322 2.0e-32 143.3 130 65.4
CANSAT78G2257 Cannabis sativa HOM05D003686 ORTHO05D004322 1.3e-31 140.6 122 65.6
TWI23G0547 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 1.7e-31 140.2 116 67.2
ECA248G2178 Erigeron canadensis HOM05D003686 ORTHO05D004322 2.2e-31 139.8 118 66.1
Thhalv10028986m.g Eutrema salsugineum HOM05D003686 ORTHO05D004322 2.2e-31 139.8 111 67.6
Gorai.004G053600 Gossypium raimondii HOM05D003686 ORTHO05D004322 2.8e-31 139.4 201 50.2
Sp6g03160 Schrenkiella parvula HOM05D003686 ORTHO05D004322 2.8e-31 139.4 111 67.6
Gohir.D08G053600 Gossypium hirsutum HOM05D003686 ORTHO05D004322 3.7e-31 139.0 116 67.2
BcaB05g23688 Brassica carinata HOM05D003686 ORTHO05D004322 4.8e-31 138.7 111 67.6
BcaB05g23689 Brassica carinata HOM05D003686 ORTHO05D004322 4.8e-31 138.7 111 67.6
Ciclev10022350m.g Citrus clementina HOM05D003686 ORTHO05D004322 4.8e-31 138.7 117 65.8
Sed0010038 Sechium edule HOM05D003686 ORTHO05D004322 4.8e-31 138.7 115 69.6
TWI14G0352 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 4.8e-31 138.7 117 65.8
TPR.G15798 Trifolium pratense HOM05D003686 ORTHO05D004322 6.3e-31 138.3 206 54.4
Haze_04804 Corylus avellana HOM05D003686 ORTHO05D004322 8.2e-31 137.9 118 65.3
Lalb_Chr06g0163281 Lupinus albus HOM05D003686 ORTHO05D004322 8.2e-31 137.9 123 65.9
FAN20G0133 Fragaria x ananassa HOM05D003686 ORTHO05D004322 1.1e-30 137.5 202 50.5
FAN27G0391 Fragaria x ananassa HOM05D003686 ORTHO05D004322 1.1e-30 137.5 202 50.5
THA.LOC104826011 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 1.1e-30 137.5 112 66.1
VMungo0720G0802 Vigna mungo HOM05D003686 ORTHO05D004322 1.4e-30 137.1 120 65.0
Aqoxy2G03146 Aquilegia oxysepala HOM05D003686 ORTHO05D004322 1.8e-30 136.7 119 63.0
Lalb_Chr02g0143061 Lupinus albus HOM05D003686 ORTHO05D004322 1.8e-30 136.7 123 65.9
Medtr1g088990 Medicago truncatula HOM05D003686 ORTHO05D004322 1.8e-30 136.7 209 59.8
Phvul.007G166600 Phaseolus vulgaris HOM05D003686 ORTHO05D004322 1.8e-30 136.7 206 56.8
GSVIVG01011011001 Vitis vinifera HOM05D003686 ORTHO05D004322 1.8e-30 136.7 128 62.5
ECA247G2101 Erigeron canadensis HOM05D003686 ORTHO05D004322 2.4e-30 136.3 108 72.2
Gohir.A08G043900 Gossypium hirsutum HOM05D003686 ORTHO05D004322 3.1e-30 136.0 201 48.8
Lsat_1_v5_gn_5_188760 Lactuca sativa HOM05D003686 ORTHO05D004322 3.1e-30 136.0 116 66.4
Eucgr.B02749 Eucalyptus grandis HOM05D003686 ORTHO05D004322 4.1e-30 135.6 117 67.5
FvH4_2g24650 Fragaria vesca HOM05D003686 ORTHO05D004322 4.1e-30 135.6 202 50.5
Manes.01G213100 Manihot esculenta HOM05D003686 ORTHO05D004322 4.1e-30 135.6 122 63.9
Potri.003G058400 Populus trichocarpa HOM05D003686 ORTHO05D004322 4.1e-30 135.6 117 65.8
QL07p015848 Quercus lobata HOM05D003686 ORTHO05D004322 4.1e-30 135.6 120 65.0
QL93p0358_0011 Quercus lobata HOM05D003686 ORTHO05D004322 4.1e-30 135.6 120 65.0
Cpa.g.sc9.157 Carica papaya HOM05D003686 ORTHO05D004322 5.3e-30 135.2 122 63.9
COL.COLO4_08036 Corchorus olitorius HOM05D003686 ORTHO05D004322 5.3e-30 135.2 126 60.3
Eucgr.A00286 Eucalyptus grandis HOM05D003686 ORTHO05D004322 5.3e-30 135.2 123 64.2
Gohir.A11G118400 Gossypium hirsutum HOM05D003686 ORTHO05D004322 6.9e-30 134.8 211 58.8
Gorai.007G132200 Gossypium raimondii HOM05D003686 ORTHO05D004322 6.9e-30 134.8 210 59.0
PGR031G1643 Punica granatum HOM05D003686 ORTHO05D004322 6.9e-30 134.8 117 65.0
ATR0706G002 Amborella trichopoda HOM05D003686 ORTHO05D004322 9.1e-30 134.4 127 59.8
AT4G03120 Arabidopsis thaliana HOM05D003686 ORTHO05D004322 9.1e-30 134.4 111 65.8
Nn1g08910 Nelumbo nucifera HOM05D003686 ORTHO05D004322 1.5e-29 133.7 128 59.4
vmacro17192 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 1.5e-29 133.7 120 64.2
TAR636G2878 Trochodendron aralioides HOM05D003686 ORTHO05D004322 2.0e-29 133.3 207 44.4
QL04p005272 Quercus lobata HOM05D003686 ORTHO05D004322 2.6e-29 132.9 121 62.8
Manes.05G068800 Manihot esculenta HOM05D003686 ORTHO05D004322 3.4e-29 132.5 122 62.3
FAN15G3346 Fragaria x ananassa HOM05D003686 ORTHO05D004322 4.5e-29 132.1 205 49.8
Medtr7g107640 Medicago truncatula HOM05D003686 ORTHO05D004322 4.5e-29 132.1 123 60.2
arahy.Tifrunner.gnm1.ann1.MV1AMG Arachis hypogaea HOM05D003686 ORTHO05D004322 5.9e-29 131.7 106 64.2
Atru.chr5.1287 Acer truncatum HOM05D003686 ORTHO05D004322 7.7e-29 131.3 119 63.9
A03p30600 Brassica napus HOM05D003686 ORTHO05D004322 7.7e-29 131.3 104 66.3
TAR362G1277 Trochodendron aralioides HOM05D003686 ORTHO05D004322 7.7e-29 131.3 120 62.5
Cfa010467 Carpinus fangiana HOM05D003686 ORTHO05D004322 1.0e-28 131.0 115 63.5
MD03G1275200 Malus domestica HOM05D003686 ORTHO05D004322 1.0e-28 131.0 118 64.4
Prupe.8G251800 Prunus persica HOM05D003686 ORTHO05D004322 1.0e-28 131.0 115 63.5
DCAR_007018 Daucus carota HOM05D003686 ORTHO05D004322 1.3e-28 130.6 117 60.7
HanXRQChr11g0330151 Helianthus annuus HOM05D003686 ORTHO05D004322 1.3e-28 130.6 124 60.5
CiPaw.07G099200 Carya illinoinensis HOM05D003686 ORTHO05D004322 1.7e-28 130.2 117 64.1
HanXRQChr01g0002781 Helianthus annuus HOM05D003686 ORTHO05D004322 1.7e-28 130.2 125 60.0
BcaB01g01979 Brassica carinata HOM05D003686 ORTHO05D004322 2.2e-28 129.8 103 66.0
BraA02t07500Z Brassica rapa HOM05D003686 ORTHO05D004322 2.2e-28 129.8 101 68.3
CARHR251560 Cardamine hirsuta HOM05D003686 ORTHO05D004322 2.2e-28 129.8 112 64.3
BcaB01g02510 Brassica carinata HOM05D003686 ORTHO05D004322 2.9e-28 129.4 103 66.0
Gohir.D11G123300 Gossypium hirsutum HOM05D003686 ORTHO05D004322 3.8e-28 129.0 207 45.9
BcaC01g06704 Brassica carinata HOM05D003686 ORTHO05D004322 6.5e-28 128.3 103 65.0
RcHm_v2.0_Chr6g0292481 Rosa chinensis HOM05D003686 ORTHO05D004322 8.5e-28 127.9 221 42.1
Dinv11293 Davidia involucrata HOM05D003686 ORTHO05D004322 1.4e-27 127.1 106 64.2
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 1.4e-27 127.1 118 61.0
A09p02440 Brassica napus HOM05D003686 ORTHO05D004322 1.9e-27 126.7 101 65.3
BraA03t12240Z Brassica rapa HOM05D003686 ORTHO05D004322 1.9e-27 126.7 102 65.7
BraA09t35891Z Brassica rapa HOM05D003686 ORTHO05D004322 1.9e-27 126.7 101 65.3
AUR62025901 Chenopodium quinoa HOM05D003686 ORTHO05D004322 1.9e-27 126.7 118 61.0
AUR62025902 Chenopodium quinoa HOM05D003686 ORTHO05D004322 1.9e-27 126.7 118 61.0
Lj1g0025208 Lotus japonicus HOM05D003686 ORTHO05D004322 1.9e-27 126.7 117 60.7
Ah.12g061550 Amaranthus hybridus HOM05D003686 ORTHO05D004322 3.2e-27 125.9 109 63.3
MSTRG.21821 Avicennia marina HOM05D003686 ORTHO05D004322 3.2e-27 125.9 125 58.4
Ca_09109_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 3.2e-27 125.9 123 59.3
PSO339G4974 Papaver somniferum HOM05D003686 ORTHO05D004322 3.2e-27 125.9 122 59.8
C03p37160 Brassica napus HOM05D003686 ORTHO05D004322 4.2e-27 125.6 102 64.7
BolC3t16013H Brassica oleracea HOM05D003686 ORTHO05D004322 4.2e-27 125.6 102 64.7
Dinv11297 Davidia involucrata HOM05D003686 ORTHO05D004322 4.2e-27 125.6 106 63.2
ClCG09G006530 Citrullus lanatus HOM05D003686 ORTHO05D004322 5.5e-27 125.2 111 63.1
Pp3c12_26180 Physcomitrium patens HOM05D003686 ORTHO05D004322 5.5e-27 125.2 117 60.7
BolC9t53184H Brassica oleracea HOM05D003686 ORTHO05D004322 7.2e-27 124.8 101 65.3
Ca_10377_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 7.2e-27 124.8 203 45.8
Ca_29655_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 7.2e-27 124.8 203 45.8
Os02g0266100 Oryza sativa ssp. japonica HOM05D003686 ORTHO05D004322 9.4e-27 124.4 119 59.7
Mapoly0087s0074 Marchantia polymorpha HOM05D003686 ORTHO05D004322 1.2e-26 124.0 119 61.3
THA.LOC104817532 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 1.2e-26 124.0 119 58.8
CiPaw.08G100800 Carya illinoinensis HOM05D003686 ORTHO05D004322 1.6e-26 123.6 110 61.8
MELO3C015891.2 Cucumis melo HOM05D003686 ORTHO05D004322 1.6e-26 123.6 111 62.2
CsaV3_7G028310 Cucumis sativus L. HOM05D003686 ORTHO05D004322 1.6e-26 123.6 111 62.2
Lj5g0005016 Lotus japonicus HOM05D003686 ORTHO05D004322 1.6e-26 123.6 111 63.1
Pp3c4_170 Physcomitrium patens HOM05D003686 ORTHO05D004322 1.6e-26 123.6 117 60.7
Sc25g0004660 Simmondsia chinensis HOM05D003686 ORTHO05D004322 1.6e-26 123.6 92 66.3
Thecc.10G102800 Theobroma cacao HOM05D003686 ORTHO05D004322 1.6e-26 123.6 108 64.8
TAR365G0683 Trochodendron aralioides HOM05D003686 ORTHO05D004322 1.6e-26 123.6 208 43.8
Hma1.2p1_0643F.1_g194700 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 2.1e-26 123.2 116 62.9
Hma1.2p1_0643F.1_g194711 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 2.1e-26 123.2 116 62.9
MD11G1297300 Malus domestica HOM05D003686 ORTHO05D004322 2.1e-26 123.2 111 62.2
A02p25120 Brassica napus HOM05D003686 ORTHO05D004322 3.6e-26 122.5 111 62.2
Mapoly0103s0046 Marchantia polymorpha HOM05D003686 ORTHO05D004322 3.6e-26 122.5 127 55.1
Psat3g024960 Pisum sativum HOM05D003686 ORTHO05D004322 3.6e-26 122.5 108 62.0
Duzib133G0241 Durio zibethinus HOM05D003686 ORTHO05D004322 4.7e-26 122.1 109 62.4
Duzib138G0197 Durio zibethinus HOM05D003686 ORTHO05D004322 4.7e-26 122.1 109 62.4
Sed0008045 Sechium edule HOM05D003686 ORTHO05D004322 4.7e-26 122.1 109 63.3
CDE11G0890 Ceratophyllum demersum HOM05D003686 ORTHO05D004322 6.1e-26 121.7 126 55.6
Zm00001eb203990 Zea mays HOM05D003686 ORTHO05D004322 6.1e-26 121.7 113 60.2
CSS0048633 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 1.0e-25 120.9 106 61.3
BolC2t10013H Brassica oleracea HOM05D003686 ORTHO05D004322 1.4e-25 120.6 104 66.3
DCAR_012430 Daucus carota HOM05D003686 ORTHO05D004322 2.3e-25 119.8 118 60.2
Migut.N00130 Erythranthe guttata HOM05D003686 ORTHO05D004322 2.3e-25 119.8 124 57.3
AagrBONN_evm.TU.Sc2ySwM_228.930 Anthoceros agrestis HOM05D003686 ORTHO05D004322 3.0e-25 119.4 59 91.5
BcaC03g16209 Brassica carinata HOM05D003686 ORTHO05D004322 3.9e-25 119.0 110 63.6
EL10Ac2g03326 Beta vulgaris HOM05D003686 ORTHO05D004322 5.2e-25 118.6 83 72.3
Carub.0006s3393 Capsella rubella HOM05D003686 ORTHO05D004322 5.2e-25 118.6 86 68.6
AUR62029649 Chenopodium quinoa HOM05D003686 ORTHO05D004322 6.7e-25 118.2 129 55.0
CAN.G185.6 Capsicum annuum HOM05D003686 ORTHO05D004322 2.0e-24 116.7 119 58.0
arahy.Tifrunner.gnm1.ann1.TAZ1K7 Arachis hypogaea HOM05D003686 ORTHO05D004322 3.3e-24 115.9 136 50.0
Hma1.2p1_0643F.1_g194695 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 1.3e-23 114.0 107 61.7
Hma1.2p1_0643F.1_g194710 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 1.3e-23 114.0 107 61.7
Solyc01g067830.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 1.3e-23 114.0 121 57.0
Sopen01g029780 Solanum pennellii HOM05D003686 ORTHO05D004322 1.3e-23 114.0 121 57.0
Peaxi162Scf00936g00218 Petunia axillaris HOM05D003686 ORTHO05D004322 2.2e-23 113.2 105 65.7
Peaxi162Scf01364g00015 Petunia axillaris HOM05D003686 ORTHO05D004322 2.8e-23 112.8 105 57.1
PGSC0003DMG400022854 Solanum tuberosum HOM05D003686 ORTHO05D004322 3.7e-23 112.5 105 59.0
Psat3g182400 Pisum sativum HOM05D003686 ORTHO05D004322 2.0e-21 106.7 63 73.0
COL.COLO4_34092 Corchorus olitorius HOM05D003686 ORTHO05D004322 5.9e-21 105.1 109 56.0
HPP92_021468 Vanilla planifolia HOM05D003686 ORTHO05D004322 5.9e-21 105.1 56 83.9
Psat0s3642g0040 Pisum sativum HOM05D000068 ORTHO05D025728 1.3e-20 104.0 63 74.6
CSS0007511 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 1.9e-19 100.1 96 60.4
CSS0037271 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 1.9e-19 100.1 96 60.4
FAN20G1534 Fragaria x ananassa HOM05D003686 ORTHO05D004322 2.1e-18 96.7 185 45.9
Lj2P1184T34 Lonicera japonica HOM05D003686 ORTHO05D004322 4.7e-18 95.5 183 52.5
Psat6g168000 Pisum sativum HOM05D003686 ORTHO05D004322 8.0e-18 94.7 101 56.4
SGA_v2.0_scaffold89G27564 Striga asiatica HOM05D003686 ORTHO05D004322 8.0e-18 94.7 94 52.1
FAN24G2968 Fragaria x ananassa HOM05D003686 ORTHO05D004322 1.8e-17 93.6 185 42.7
Sabra03G0032800 Salix brachista HOM05D003686 ORTHO05D004322 6.7e-17 91.7 100 58.0
Hund24902 Selenicereus undatus HOM05D003686 ORTHO05D004322 3.3e-16 89.4 100 57.0
C09p02540 Brassica napus HOM05D003686 ORTHO05D004322 4.4e-16 89.0 86 59.3
vmacro02511 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 1.3e-15 87.4 79 60.8
HPP92_021461 Vanilla planifolia HOM05D003686 ORTHO05D004322 3.7e-15 85.9 107 53.3
Nn2g12370 Nelumbo nucifera HOM05D003686 ORTHO05D004322 9.1e-14 81.3 108 49.1
Cre09.g401300 Chlamydomonas reinhardtii HOM05D003686 ORTHO05D004322 1.2e-13 80.9 41 80.5
Nitab4.5_0001149g0030 Nicotiana tabacum HOM05D003686 ORTHO05D004322 2.0e-13 80.1 105 47.6
Nitab4.5_0001624g0040 Nicotiana tabacum HOM05D003686 ORTHO05D004322 2.0e-13 80.1 105 47.6
Lj3A810T51 Lonicera japonica HOM05D003686 ORTHO05D004322 4.5e-13 79.0 92 56.5
unitig_22.g6331 Utricularia gibba HOM05D003686 ORTHO05D004322 5.0e-12 75.5 118 43.2
vmacro14959 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 2.0e-08 63.5 124 41.1
PRCOL_00005459 Prasinoderma coloniale HOM05D003686 ORTHO05D004322 2.6e-08 63.2 104 44.2
Lj5g0025755 Lotus japonicus HOM05D003686 ORTHO05D009933 7.5e-08 61.6 59 54.2
vmacro14957 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 1.3e-07 60.8 84 48.8
Duzib211G0369 Durio zibethinus HOM05D003686 ORTHO05D004322 7.0e-06 55.1 82 51.2


User provided reference genes

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