Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F01702 Erythranthe guttata HOM05D006329 ORTHO05D008357 9.4e-226 786.6 410 100.0
SalBow6G7241 Salvia bowleyana HOM05D006329 ORTHO05D008357 1.3e-171 606.7 401 78.1
MSTRG.389 Avicennia marina HOM05D006329 ORTHO05D008357 4.0e-168 595.1 401 75.8
Cc02_g10940 Coffea canephora HOM05D006329 ORTHO05D008357 2.2e-158 562.8 409 72.4
Nitab4.5_0001450g0040 Nicotiana tabacum HOM05D006329 ORTHO05D008357 1.9e-157 559.7 413 69.7
Nitab4.5_0001659g0150 Nicotiana tabacum HOM05D006329 ORTHO05D008357 3.5e-156 555.4 413 69.5
SGA_v2.0_scaffold51G18714 Striga asiatica HOM05D006329 ORTHO05D008357 1.4e-152 543.5 392 73.5
Solyc11g008360.3 Solanum lycopersicum HOM05D006329 ORTHO05D008357 1.2e-151 540.4 417 69.1
PGSC0003DMG400007434 Solanum tuberosum HOM05D006329 ORTHO05D008357 4.5e-151 538.5 411 68.6
Actinidia34805 Actinidia chinensis HOM05D006329 ORTHO05D008357 1.2e-148 530.4 399 68.4
Hma1.2p1_2894F.1_g329960 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 1.9e-146 523.1 403 68.2
Oeu013841.1 Olea europaea HOM05D006329 ORTHO05D008357 6.3e-145 518.1 394 71.1
Gohir.A10G203300 Gossypium hirsutum HOM05D006329 ORTHO05D008357 1.9e-141 506.5 417 65.5
Thecc.10G083200 Theobroma cacao HOM05D006329 ORTHO05D008357 2.5e-141 506.1 367 69.5
Gohir.D10G211400 Gossypium hirsutum HOM05D006329 ORTHO05D008357 4.2e-141 505.4 417 64.7
Gorai.011G237100 Gossypium raimondii HOM05D006329 ORTHO05D008357 4.2e-141 505.4 417 64.7
Potri.008G035500 Populus trichocarpa HOM05D006329 ORTHO05D008357 5.5e-141 505.0 395 65.3
Sabra08G0023700 Salix brachista HOM05D006329 ORTHO05D008357 2.1e-140 503.1 404 66.8
COL.COLO4_17136 Corchorus olitorius HOM05D006329 ORTHO05D008357 3.9e-139 498.8 408 64.5
Nn6g35280 Nelumbo nucifera HOM05D006329 ORTHO05D008357 5.7e-138 495.0 402 64.4
QL08p054507 Quercus lobata HOM05D006329 ORTHO05D008357 4.8e-137 491.9 397 65.0
Duzib114G0755 Durio zibethinus HOM05D006329 ORTHO05D008357 6.3e-137 491.5 410 62.2
Peaxi162Scf00145g01311 Petunia axillaris HOM05D006329 ORTHO05D008357 1.8e-136 490.0 370 69.2
Thhalv10016747m.g Eutrema salsugineum HOM05D006329 ORTHO05D008357 3.1e-136 489.2 407 62.2
MBI18_g02633_MAGBIO Magnolia biondii HOM05D006329 ORTHO05D008357 6.9e-136 488.0 401 63.8
THA.LOC104824234 Tarenaya hassleriana HOM05D006329 ORTHO05D008357 6.9e-136 488.0 411 63.5
Aqoxy1G01144 Aquilegia oxysepala HOM05D006329 ORTHO05D008357 9.1e-136 487.6 408 62.3
MD07G1170000 Malus domestica HOM05D006329 ORTHO05D008357 1.2e-135 487.3 402 64.4
QL08p054383 Quercus lobata HOM05D006329 ORTHO05D008357 2.0e-135 486.5 397 64.5
TAR623G1379 Trochodendron aralioides HOM05D006329 ORTHO05D008357 7.7e-135 484.6 408 62.7
RcHm_v2.0_Chr1g0362601 Rosa chinensis HOM05D006329 ORTHO05D008357 1.3e-134 483.8 405 64.2
Sed0004104 Sechium edule HOM05D006329 ORTHO05D008357 1.7e-134 483.4 392 64.5
Prupe.2G208900 Prunus persica HOM05D006329 ORTHO05D008357 1.1e-133 480.7 404 66.6
Ciclev10031516m.g Citrus clementina HOM05D006329 ORTHO05D008357 2.5e-133 479.6 384 65.1
Manes.05G201000 Manihot esculenta HOM05D006329 ORTHO05D008357 2.5e-133 479.6 416 59.9
AL4G36440 Arabidopsis lyrata HOM05D006329 ORTHO05D008357 5.5e-133 478.4 416 60.6
BcaB02g09141 Brassica carinata HOM05D006329 ORTHO05D008357 9.4e-133 477.6 407 62.2
FAN10G3782 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.6e-132 476.9 405 63.5
Rhsim09G0148200 Rhododendron simsii HOM05D000461 ORTHO05D001829 1.6e-132 476.9 427 62.3
Atru.chr12.838 Acer truncatum HOM05D003507 ORTHO05D008357 3.6e-132 475.7 379 64.6
FvH4_7g18810 Fragaria vesca HOM05D006329 ORTHO05D008357 1.8e-131 473.4 403 63.0
PGR142G3823 Punica granatum HOM05D006329 ORTHO05D008357 3.0e-131 472.6 408 63.0
Sp4g21490 Schrenkiella parvula HOM05D006329 ORTHO05D008357 3.9e-131 472.2 410 60.7
MELO3C019822.2 Cucumis melo HOM05D006329 ORTHO05D008357 5.1e-131 471.9 337 70.3
AT2G39140 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 6.7e-131 471.5 416 60.1
CsaV3_6G036680 Cucumis sativus L. HOM05D006329 ORTHO05D008357 2.6e-130 469.5 337 70.0
FAN06G3910 Fragaria x ananassa HOM05D006329 ORTHO05D008357 3.3e-130 469.2 403 62.3
Sopen11g004170 Solanum pennellii HOM05D006329 ORTHO05D008357 9.7e-130 467.6 296 79.1
FAN10G0068 Fragaria x ananassa HOM05D006329 ORTHO05D008357 2.8e-129 466.1 405 62.2
CiPaw.01G268700 Carya illinoinensis HOM05D006329 ORTHO05D008357 3.7e-129 465.7 337 68.5
ClCG08G007690 Citrullus lanatus HOM05D006329 ORTHO05D008357 4.8e-129 465.3 321 72.0
CARHR133910 Cardamine hirsuta HOM05D006329 ORTHO05D008357 8.2e-129 464.5 411 60.3
Ca_10544_v3 Cicer arietinum L. HOM05D006329 ORTHO05D008357 8.2e-129 464.5 404 60.1
Cpa.g.sc53.128 Carica papaya HOM05D006329 ORTHO05D008357 4.1e-128 462.2 327 71.6
Carub.0004s2119 Capsella rubella HOM05D006329 ORTHO05D008357 1.2e-127 460.7 415 59.3
Eucgr.G02867 Eucalyptus grandis HOM05D006329 ORTHO05D008357 5.9e-127 458.4 328 68.6
Psat6g180040 Pisum sativum HOM05D006329 ORTHO05D008357 5.9e-127 458.4 402 60.7
arahy.Tifrunner.gnm1.ann1.KFTR8M Arachis hypogaea HOM05D006329 ORTHO05D008357 7.7e-127 458.0 412 61.4
CANSAT56G2601 Cannabis sativa HOM05D006329 ORTHO05D008357 1.7e-126 456.8 341 67.4
GSVIVG01016221001 Vitis vinifera HOM05D006329 ORTHO05D008357 2.2e-126 456.4 269 80.7
BraA05t19681Z Brassica rapa HOM05D006329 ORTHO05D008357 3.8e-126 455.7 406 60.1
vmacro04842 Vaccinium macrocarpon HOM05D006329 ORTHO05D008357 6.5e-126 454.9 421 60.6
PSO339G5012 Papaver somniferum HOM05D006329 ORTHO05D008357 1.5e-125 453.8 418 58.1
Haze_16856 Corylus avellana HOM05D006329 ORTHO05D008357 1.9e-125 453.4 339 66.7
PSO063G6532 Papaver somniferum HOM05D006329 ORTHO05D008357 1.9e-125 453.4 376 60.9
A05p07160 Brassica napus HOM05D006329 ORTHO05D008357 5.5e-125 451.8 406 59.9
CDE03G0204 Ceratophyllum demersum HOM05D006329 ORTHO05D008357 2.1e-124 449.9 382 60.7
Phvul.007G098900 Phaseolus vulgaris HOM05D006329 ORTHO05D008357 2.7e-124 449.5 328 68.3
Glyma.10G207800 Glycine max HOM05D006329 ORTHO05D008357 6.1e-124 448.4 401 60.6
HanXRQChr14g0456591 Helianthus annuus HOM05D006329 ORTHO05D008357 6.1e-124 448.4 401 60.8
Lsat_1_v5_gn_2_113040 Lactuca sativa HOM05D006329 ORTHO05D008357 1.4e-123 447.2 403 61.8
Medtr1g094190 Medicago truncatula HOM05D006329 ORTHO05D008357 6.7e-123 444.9 406 58.9
EL10Ac6g14260 Beta vulgaris HOM05D006329 ORTHO05D008357 7.4e-122 441.4 307 72.0
FAN06G0494 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.3e-121 440.7 408 59.6
Lj5g0015116 Lotus japonicus HOM05D006329 ORTHO05D008357 2.8e-121 439.5 340 65.6
TPR.G10288 Trifolium pratense HOM05D006329 ORTHO05D008357 6.3e-121 438.3 404 58.9
Ah.02g128110 Amaranthus hybridus HOM05D006329 ORTHO05D008357 5.3e-120 435.3 326 68.7
FAN03G2323 Fragaria x ananassa HOM05D003507 ORTHO05D004324 5.3e-120 435.3 308 71.4
BolC4t22452H Brassica oleracea HOM05D006329 ORTHO05D008357 7.0e-120 434.9 328 66.5
BcaC02g12042 Brassica carinata HOM05D006329 ORTHO05D008357 9.1e-120 434.5 329 66.3
C04p08570 Brassica napus HOM05D006329 ORTHO05D008357 9.1e-120 434.5 329 66.3
CSS0005771 Camellia sinensis var. sinensis HOM05D006329 ORTHO05D008357 1.2e-119 434.1 399 60.4
arahy.Tifrunner.gnm1.ann1.21BGD2 Arachis hypogaea HOM05D006329 ORTHO05D008357 1.6e-119 433.7 402 60.2
CAN.G321.64 Capsicum annuum HOM05D006329 ORTHO05D008357 2.6e-119 433.0 253 83.0
DCAR_005490 Daucus carota HOM05D006329 ORTHO05D008357 1.0e-118 431.0 385 60.5
ATR0219G015 Amborella trichopoda HOM05D006329 ORTHO05D008357 6.5e-118 428.3 401 59.4
Cfa001679 Carpinus fangiana HOM05D006329 ORTHO05D008357 1.0e-115 421.0 283 72.4
Lalb_Chr21g0313671 Lupinus albus HOM05D006329 ORTHO05D008357 1.4e-115 420.6 348 60.9
HPP92_026018 Vanilla planifolia HOM05D006329 ORTHO05D008357 5.2e-115 418.7 358 63.4
Lj3A938T44 Lonicera japonica HOM05D006329 ORTHO05D008357 3.7e-113 412.5 389 60.9
Hund20700 Selenicereus undatus HOM05D006329 ORTHO05D008357 4.8e-113 412.1 479 52.2
Dinv31231 Davidia involucrata HOM05D006329 ORTHO05D008357 8.3e-113 411.4 326 67.5
Zm00001eb004240 Zea mays HOM05D006329 ORTHO05D008357 1.8e-112 410.2 415 55.7
RhsimUnG0185600 Rhododendron simsii HOM05D000461 ORTHO05D001829 9.1e-112 407.9 387 60.2
EL10Ac4g09587 Beta vulgaris HOM05D006329 ORTHO05D008357 1.6e-111 407.1 327 64.5
ECA238G1295 Erigeron canadensis HOM05D006329 ORTHO05D001676 8.5e-110 401.4 250 78.0
HPP92_027741 Vanilla planifolia HOM05D006329 ORTHO05D008357 3.4e-106 389.4 307 67.4
VMungo0251G3605 Vigna mungo HOM05D006329 ORTHO05D008357 2.3e-102 376.7 318 62.3
AUR62002759 Chenopodium quinoa HOM05D006329 ORTHO05D008357 1.1e-101 374.4 365 59.2
Os03g0152700 Oryza sativa ssp. japonica HOM05D006329 ORTHO05D008357 6.8e-99 365.2 337 58.2
Mapoly0002s0007 Marchantia polymorpha HOM05D006329 ORTHO05D008357 8.3e-97 358.2 263 66.5
Lalb_Chr21g0313541 Lupinus albus HOM05D006329 ORTHO05D008357 6.8e-91 338.6 209 75.1
SMO329G0071 Selaginella moellendorffii HOM05D006329 ORTHO05D008357 3.5e-87 326.2 252 61.9
Pp3c7_13640 Physcomitrium patens HOM05D006329 ORTHO05D008357 7.8e-87 325.1 294 56.5
Aa31LG5G20460 Aethionema arabicum HOM05D006329 ORTHO05D008357 1.7e-86 323.9 370 52.7
Cfa001678 Carpinus fangiana HOM05D006329 ORTHO05D008357 2.6e-82 310.1 222 69.4
Sc09g0006060 Simmondsia chinensis HOM05D006329 ORTHO05D008357 1.7e-78 297.4 306 54.9
FAN01G2166 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.5e-69 267.7 193 71.5
HPP92_026744 Vanilla planifolia HOM05D006329 ORTHO05D008357 1.1e-61 241.5 232 59.5
MCO14G528 Micromonas commoda HOM05D006329 ORTHO05D008357 1.8e-51 207.6 254 45.3
CBR_g29624 Chara braunii HOM05D006329 ORTHO05D008357 1.2e-50 204.9 192 56.2
AUR62014125 Chenopodium quinoa HOM05D006329 ORTHO05D008357 3.5e-47 193.4 156 66.0
Cre02.g095121 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 9.6e-45 185.3 320 37.8
PRCOL_00004574 Prasinoderma coloniale HOM05D006329 ORTHO05D008357 9.6e-45 185.3 250 44.0
CAN.G176.13 Capsicum annuum HOM05D006329 ORTHO05D033978 9.3e-32 142.1 83 78.3
Hma1.2p1_2894F.1_g329970 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 3.9e-30 136.7 79 79.7
Pp3s196_90 Physcomitrium patens HOM05D006329 ORTHO05D008357 5.5e-24 116.3 247 30.4
AT3G43340 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 3.6e-23 113.6 73 74.0
Hma1.2p1_2894F.1_g329973 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 1.7e-17 94.7 54 77.8
Cre07.g323550 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 2.5e-16 90.9 250 28.0
MCO04G216 Micromonas commoda HOM05D006329 ORTHO05D008357 1.7e-12 78.2 260 25.8
Glyma.20G182966 Glycine max HOM05D006329 ORTHO05D028485 3.7e-12 77.0 69 58.0
Potri.010G226901 Populus trichocarpa HOM05D006329 ORTHO05D028485 5.3e-11 73.2 51 72.5
MCO01G641 Micromonas commoda HOM05D006329 ORTHO05D008357 9.1e-11 72.4 235 27.7
CAN.G184.4 Capsicum annuum HOM05D006329 ORTHO05D028485 5.9e-10 69.7 53 60.4
PRCOL_00006422 Prasinoderma coloniale HOM05D006329 ORTHO05D008357 1.2e-07 62.0 202 28.7


User provided reference genes

Program Settings