Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g094190 Medicago truncatula HOM05D006329 ORTHO05D008357 5.5e-218 760.8 409 100.0
Ca_10544_v3 Cicer arietinum L. HOM05D006329 ORTHO05D008357 8.6e-187 657.1 415 86.7
TPR.G10288 Trifolium pratense HOM05D006329 ORTHO05D008357 8.1e-185 650.6 414 88.2
Psat6g180040 Pisum sativum HOM05D006329 ORTHO05D008357 1.4e-181 639.8 412 85.2
Phvul.007G098900 Phaseolus vulgaris HOM05D006329 ORTHO05D008357 1.9e-157 559.7 402 75.4
Glyma.10G207800 Glycine max HOM05D006329 ORTHO05D008357 5.4e-157 558.1 404 74.8
Lj5g0015116 Lotus japonicus HOM05D006329 ORTHO05D008357 2.9e-150 535.8 414 73.2
arahy.Tifrunner.gnm1.ann1.KFTR8M Arachis hypogaea HOM05D006329 ORTHO05D008357 2.5e-149 532.7 416 71.4
Lalb_Chr21g0313671 Lupinus albus HOM05D006329 ORTHO05D008357 1.4e-144 516.9 413 70.9
arahy.Tifrunner.gnm1.ann1.21BGD2 Arachis hypogaea HOM05D006329 ORTHO05D008357 9.3e-141 504.2 406 69.7
QL08p054507 Quercus lobata HOM05D006329 ORTHO05D008357 4.2e-133 478.8 407 67.1
Sed0004104 Sechium edule HOM05D006329 ORTHO05D008357 1.2e-132 477.2 397 63.2
Duzib114G0755 Durio zibethinus HOM05D006329 ORTHO05D008357 2.3e-131 473.0 412 63.6
Nitab4.5_0001659g0150 Nicotiana tabacum HOM05D006329 ORTHO05D008357 2.3e-131 473.0 414 61.6
FvH4_7g18810 Fragaria vesca HOM05D006329 ORTHO05D008357 3.0e-131 472.6 404 65.1
FAN10G3782 Fragaria x ananassa HOM05D006329 ORTHO05D008357 3.0e-131 472.6 403 63.0
QL08p054383 Quercus lobata HOM05D006329 ORTHO05D008357 3.0e-131 472.6 407 66.3
MD07G1170000 Malus domestica HOM05D006329 ORTHO05D008357 3.9e-131 472.2 404 64.9
Nitab4.5_0001450g0040 Nicotiana tabacum HOM05D006329 ORTHO05D008357 3.9e-131 472.2 414 61.1
Atru.chr12.838 Acer truncatum HOM05D003507 ORTHO05D008357 8.8e-131 471.1 379 64.9
Thecc.10G083200 Theobroma cacao HOM05D006329 ORTHO05D008357 8.8e-131 471.1 376 65.2
CsaV3_6G036680 Cucumis sativus L. HOM05D006329 ORTHO05D008357 2.5e-130 469.5 332 71.1
FAN06G3910 Fragaria x ananassa HOM05D006329 ORTHO05D008357 2.5e-130 469.5 404 64.9
Sabra08G0023700 Salix brachista HOM05D006329 ORTHO05D008357 2.5e-130 469.5 366 66.4
VMungo0251G3605 Vigna mungo HOM05D006329 ORTHO05D008357 2.5e-130 469.5 322 75.2
CiPaw.01G268700 Carya illinoinensis HOM05D006329 ORTHO05D008357 3.3e-130 469.2 331 71.3
Potri.008G035500 Populus trichocarpa HOM05D006329 ORTHO05D008357 3.3e-130 469.2 399 62.2
PGSC0003DMG400007434 Solanum tuberosum HOM05D006329 ORTHO05D008357 7.4e-130 468.0 415 66.0
Gohir.D10G211400 Gossypium hirsutum HOM05D006329 ORTHO05D008357 1.3e-129 467.2 401 62.1
Gorai.011G237100 Gossypium raimondii HOM05D006329 ORTHO05D008357 1.3e-129 467.2 401 62.1
Gohir.A10G203300 Gossypium hirsutum HOM05D006329 ORTHO05D008357 1.7e-129 466.8 401 62.1
Solyc11g008360.3 Solanum lycopersicum HOM05D006329 ORTHO05D008357 1.7e-129 466.8 418 63.4
MELO3C019822.2 Cucumis melo HOM05D006329 ORTHO05D008357 2.2e-129 466.5 406 65.8
COL.COLO4_17136 Corchorus olitorius HOM05D006329 ORTHO05D008357 1.4e-128 463.8 396 62.9
FAN10G0068 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.4e-128 463.8 403 62.5
Manes.05G201000 Manihot esculenta HOM05D006329 ORTHO05D008357 1.4e-128 463.8 395 63.0
RcHm_v2.0_Chr1g0362601 Rosa chinensis HOM05D006329 ORTHO05D008357 3.1e-128 462.6 406 61.6
Prupe.2G208900 Prunus persica HOM05D006329 ORTHO05D008357 9.1e-128 461.1 406 65.3
CANSAT56G2601 Cannabis sativa HOM05D006329 ORTHO05D008357 1.3e-126 457.2 333 70.6
Haze_16856 Corylus avellana HOM05D006329 ORTHO05D008357 2.2e-126 456.4 347 66.6
Eucgr.G02867 Eucalyptus grandis HOM05D006329 ORTHO05D008357 2.9e-126 456.1 330 69.1
Actinidia34805 Actinidia chinensis HOM05D006329 ORTHO05D008357 3.8e-126 455.7 398 60.1
Aqoxy1G01144 Aquilegia oxysepala HOM05D006329 ORTHO05D008357 5.0e-126 455.3 398 60.3
Cc02_g10940 Coffea canephora HOM05D006329 ORTHO05D008357 5.0e-126 455.3 414 60.4
THA.LOC104824234 Tarenaya hassleriana HOM05D006329 ORTHO05D008357 5.0e-126 455.3 406 61.3
Nn6g35280 Nelumbo nucifera HOM05D006329 ORTHO05D008357 1.1e-125 454.1 403 59.8
Ciclev10031516m.g Citrus clementina HOM05D006329 ORTHO05D008357 1.4e-125 453.8 377 63.7
PGR142G3823 Punica granatum HOM05D006329 ORTHO05D008357 1.9e-125 453.4 380 67.6
Hma1.2p1_2894F.1_g329960 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 5.5e-125 451.8 407 60.4
Thhalv10016747m.g Eutrema salsugineum HOM05D006329 ORTHO05D008357 1.6e-124 450.3 409 59.7
SalBow6G7241 Salvia bowleyana HOM05D006329 ORTHO05D008357 1.6e-124 450.3 402 60.2
ClCG08G007690 Citrullus lanatus HOM05D006329 ORTHO05D008357 4.7e-124 448.7 392 67.1
Migut.F01702 Erythranthe guttata HOM05D006329 ORTHO05D008357 4.7e-124 448.7 406 58.9
TAR623G1379 Trochodendron aralioides HOM05D006329 ORTHO05D008357 3.0e-123 446.0 409 58.4
MBI18_g02633_MAGBIO Magnolia biondii HOM05D006329 ORTHO05D008357 1.1e-122 444.1 419 57.5
FAN06G0494 Fragaria x ananassa HOM05D006329 ORTHO05D008357 2.0e-122 443.4 409 62.1
BcaB02g09141 Brassica carinata HOM05D006329 ORTHO05D008357 2.6e-122 443.0 404 59.4
AL4G36440 Arabidopsis lyrata HOM05D006329 ORTHO05D008357 3.3e-122 442.6 414 58.2
HanXRQChr14g0456591 Helianthus annuus HOM05D006329 ORTHO05D008357 4.4e-122 442.2 314 68.8
AT2G39140 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 7.4e-122 441.4 412 58.5
PSO063G6532 Papaver somniferum HOM05D006329 ORTHO05D008357 1.3e-121 440.7 334 65.6
Sp4g21490 Schrenkiella parvula HOM05D006329 ORTHO05D008357 1.7e-121 440.3 414 59.2
PSO339G5012 Papaver somniferum HOM05D006329 ORTHO05D008357 3.7e-121 439.1 334 65.3
Sopen11g004170 Solanum pennellii HOM05D006329 ORTHO05D008357 3.7e-121 439.1 306 71.9
GSVIVG01016221001 Vitis vinifera HOM05D006329 ORTHO05D008357 3.7e-121 439.1 274 77.4
MSTRG.389 Avicennia marina HOM05D006329 ORTHO05D008357 4.8e-121 438.7 398 59.0
CDE03G0204 Ceratophyllum demersum HOM05D006329 ORTHO05D008357 4.8e-121 438.7 381 60.6
Lsat_1_v5_gn_2_113040 Lactuca sativa HOM05D006329 ORTHO05D008357 4.1e-120 435.6 306 70.6
Carub.0004s2119 Capsella rubella HOM05D006329 ORTHO05D008357 4.5e-119 432.2 424 56.4
CARHR133910 Cardamine hirsuta HOM05D006329 ORTHO05D008357 1.7e-118 430.3 415 56.9
Zm00001eb004240 Zea mays HOM05D006329 ORTHO05D008357 1.5e-117 427.2 344 62.5
FAN03G2323 Fragaria x ananassa HOM05D003507 ORTHO05D004324 1.9e-117 426.8 318 68.9
Oeu013841.1 Olea europaea HOM05D006329 ORTHO05D008357 4.2e-117 425.6 395 60.3
BraA05t19681Z Brassica rapa HOM05D006329 ORTHO05D008357 7.2e-117 424.9 330 65.5
Cfa001679 Carpinus fangiana HOM05D006329 ORTHO05D008357 9.4e-117 424.5 290 72.4
SGA_v2.0_scaffold51G18714 Striga asiatica HOM05D006329 ORTHO05D008357 9.4e-117 424.5 387 60.2
Ah.02g128110 Amaranthus hybridus HOM05D006329 ORTHO05D008357 1.2e-116 424.1 330 66.4
BcaC02g12042 Brassica carinata HOM05D006329 ORTHO05D008357 1.6e-116 423.7 330 65.2
A05p07160 Brassica napus HOM05D006329 ORTHO05D008357 1.6e-116 423.7 377 59.9
C04p08570 Brassica napus HOM05D006329 ORTHO05D008357 1.6e-116 423.7 330 65.2
BolC4t22452H Brassica oleracea HOM05D006329 ORTHO05D008357 1.6e-116 423.7 330 65.2
EL10Ac6g14260 Beta vulgaris HOM05D006329 ORTHO05D008357 1.0e-115 421.0 311 67.8
Peaxi162Scf00145g01311 Petunia axillaris HOM05D006329 ORTHO05D008357 1.8e-115 420.2 370 62.2
Rhsim09G0148200 Rhododendron simsii HOM05D000461 ORTHO05D001829 1.8e-115 420.2 413 56.2
ATR0219G015 Amborella trichopoda HOM05D006329 ORTHO05D008357 9.7e-114 414.5 369 59.3
Cpa.g.sc53.128 Carica papaya HOM05D006329 ORTHO05D008357 1.7e-113 413.7 384 58.1
CAN.G321.64 Capsicum annuum HOM05D006329 ORTHO05D008357 1.1e-112 411.0 251 78.5
ECA238G1295 Erigeron canadensis HOM05D006329 ORTHO05D001676 9.1e-112 407.9 247 77.7
EL10Ac4g09587 Beta vulgaris HOM05D006329 ORTHO05D008357 5.0e-110 402.1 328 64.3
HPP92_026018 Vanilla planifolia HOM05D006329 ORTHO05D008357 5.5e-109 398.7 332 61.7
DCAR_005490 Daucus carota HOM05D006329 ORTHO05D008357 3.0e-107 392.9 297 66.7
vmacro04842 Vaccinium macrocarpon HOM05D006329 ORTHO05D008357 1.5e-106 390.6 415 54.2
Os03g0152700 Oryza sativa ssp. japonica HOM05D006329 ORTHO05D008357 4.1e-104 382.5 305 62.3
HPP92_027741 Vanilla planifolia HOM05D006329 ORTHO05D008357 4.1e-104 382.5 315 62.9
Lalb_Chr21g0313541 Lupinus albus HOM05D006329 ORTHO05D008357 3.5e-103 379.4 210 86.7
Hund20700 Selenicereus undatus HOM05D006329 ORTHO05D008357 2.3e-99 366.7 407 51.4
CSS0005771 Camellia sinensis var. sinensis HOM05D006329 ORTHO05D008357 6.8e-99 365.2 401 54.1
AUR62002759 Chenopodium quinoa HOM05D006329 ORTHO05D008357 6.3e-97 358.6 252 72.2
RhsimUnG0185600 Rhododendron simsii HOM05D000461 ORTHO05D001829 7.7e-95 351.7 374 53.5
Lj3A938T44 Lonicera japonica HOM05D006329 ORTHO05D008357 5.0e-94 349.0 387 53.7
Dinv31231 Davidia involucrata HOM05D006329 ORTHO05D008357 6.6e-94 348.6 327 59.3
Mapoly0002s0007 Marchantia polymorpha HOM05D006329 ORTHO05D008357 1.2e-87 327.8 270 59.3
Pp3c7_13640 Physcomitrium patens HOM05D006329 ORTHO05D008357 1.9e-85 320.5 290 57.9
SMO329G0071 Selaginella moellendorffii HOM05D006329 ORTHO05D008357 1.1e-80 304.7 252 59.1
Cfa001678 Carpinus fangiana HOM05D006329 ORTHO05D008357 1.6e-79 300.8 228 67.1
Aa31LG5G20460 Aethionema arabicum HOM05D006329 ORTHO05D008357 8.6e-78 295.0 369 49.1
Sc09g0006060 Simmondsia chinensis HOM05D006329 ORTHO05D008357 5.1e-70 269.2 205 67.3
FAN01G2166 Fragaria x ananassa HOM05D006329 ORTHO05D008357 6.8e-67 258.8 185 70.8
HPP92_026744 Vanilla planifolia HOM05D006329 ORTHO05D008357 4.6e-63 246.1 254 53.9
CBR_g29624 Chara braunii HOM05D006329 ORTHO05D008357 1.2e-55 221.5 162 66.0
MCO14G528 Micromonas commoda HOM05D006329 ORTHO05D008357 2.1e-52 210.7 256 45.3
Cre02.g095121 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 1.3e-49 201.4 330 38.2
PRCOL_00004574 Prasinoderma coloniale HOM05D006329 ORTHO05D008357 2.8e-44 183.7 252 41.7
AUR62014125 Chenopodium quinoa HOM05D006329 ORTHO05D008357 4.9e-41 172.9 166 59.0
CAN.G176.13 Capsicum annuum HOM05D006329 ORTHO05D033978 8.7e-30 135.6 83 75.9
Pp3s196_90 Physcomitrium patens HOM05D006329 ORTHO05D008357 5.7e-29 132.9 247 32.4
Hma1.2p1_2894F.1_g329970 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 9.6e-29 132.1 79 75.9
AT3G43340 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 6.1e-23 112.8 73 72.6
Cre07.g323550 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 4.5e-18 96.7 263 31.2
Hma1.2p1_2894F.1_g329973 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 1.7e-17 94.7 54 77.8
Glyma.20G182966 Glycine max HOM05D006329 ORTHO05D028485 3.8e-17 93.6 88 56.8
Lalb_Chr21g0313531 Lupinus albus HOM05D006329 ORTHO05D008357 6.7e-14 82.8 103 46.6
CAN.G184.4 Capsicum annuum HOM05D006329 ORTHO05D028485 2.8e-12 77.4 53 66.0
MCO04G216 Micromonas commoda HOM05D006329 ORTHO05D008357 2.8e-12 77.4 265 27.5
MCO01G641 Micromonas commoda HOM05D006329 ORTHO05D008357 1.2e-10 72.0 231 28.1
Potri.010G226901 Populus trichocarpa HOM05D006329 ORTHO05D028485 1.3e-09 68.6 51 66.7


User provided reference genes

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