Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0105s0015 Marchantia polymorpha HOM05D003850 ORTHO05D004515 2.2e-241 839.0 551 100.0
Pp3c3_2280 Physcomitrium patens HOM05D003850 ORTHO05D004515 1.6e-127 460.7 558 55.7
Nn1g03331 Nelumbo nucifera HOM05D003850 ORTHO05D004515 1.8e-123 447.2 551 52.6
QL05p069776 Quercus lobata HOM05D003850 ORTHO05D004515 6.9e-123 445.3 550 52.0
CSS0032808 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 5.9e-122 442.2 558 49.3
CANSAT56G0590 Cannabis sativa HOM05D003850 ORTHO05D004515 5.9e-122 442.2 563 50.3
CiPaw.09G102000 Carya illinoinensis HOM05D003850 ORTHO05D004515 3.2e-120 436.4 548 53.1
SEGI_18521 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 3.2e-120 436.4 555 60.4
Duzib160G0220 Durio zibethinus HOM05D003850 ORTHO05D004515 1.6e-119 434.1 590 49.3
Aqoxy1G04110 Aquilegia oxysepala HOM05D003850 ORTHO05D004515 2.1e-119 433.7 559 50.1
Eucgr.E03951 Eucalyptus grandis HOM05D003850 ORTHO05D004515 6.7e-118 428.7 553 55.0
Potri.006G009100 Populus trichocarpa HOM05D003850 ORTHO05D004515 2.6e-117 426.8 549 50.6
CSS0007684 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 2.8e-116 423.3 551 52.6
TAR624G0821 Trochodendron aralioides HOM05D003850 ORTHO05D004515 6.3e-116 422.2 550 51.3
Nn1g07354 Nelumbo nucifera HOM05D003850 ORTHO05D004515 8.2e-116 421.8 547 51.6
Atru.chr1.2461 Acer truncatum HOM05D003850 ORTHO05D004515 1.8e-115 420.6 557 51.5
TAR629G2665 Trochodendron aralioides HOM05D003850 ORTHO05D004515 3.1e-115 419.9 551 51.4
Ciclev10014841m.g Citrus clementina HOM05D003850 ORTHO05D004515 5.3e-115 419.1 551 50.6
GSVIVG01003352001 Vitis vinifera HOM05D003850 ORTHO05D004515 9.1e-115 418.3 548 53.5
Glyma.09G009900 Glycine max HOM05D003850 ORTHO05D004515 1.7e-113 414.1 549 52.6
MSTRG.7170 Avicennia marina HOM05D003850 ORTHO05D004515 3.8e-113 412.9 555 51.2
HPP92_001629 Vanilla planifolia HOM05D003850 ORTHO05D004515 1.1e-112 411.4 554 46.4
SalBow8G5272 Salvia bowleyana HOM05D003850 ORTHO05D004515 5.5e-112 409.1 562 50.5
Ca_00718_v3 Cicer arietinum L. HOM05D003850 ORTHO05D004515 2.7e-111 406.8 565 47.1
Manes.07G088900 Manihot esculenta HOM05D003850 ORTHO05D004515 2.7e-111 406.8 548 50.7
arahy.Tifrunner.gnm1.ann1.C17RPB Arachis hypogaea HOM05D003850 ORTHO05D004515 6.1e-111 405.6 561 46.3
MBI16_g42266_MAGBIO Magnolia biondii HOM05D003850 ORTHO05D004515 6.1e-111 405.6 546 51.1
Thecc.06G232700 Theobroma cacao HOM05D003850 ORTHO05D004515 1.4e-110 404.4 558 50.0
Potri.016G015100 Populus trichocarpa HOM05D003850 ORTHO05D004515 2.3e-110 403.7 555 55.5
Lalb_Chr20g0119201 Lupinus albus HOM05D003850 ORTHO05D004515 3.0e-110 403.3 556 53.8
THA.LOC104812992 Tarenaya hassleriana HOM05D003850 ORTHO05D004515 3.0e-110 403.3 553 50.3
Phvul.006G143600 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 2.0e-109 400.6 551 48.6
PGR102G0753 Punica granatum HOM05D003850 ORTHO05D004515 4.4e-109 399.4 550 56.7
arahy.Tifrunner.gnm1.ann1.IIR6TV Arachis hypogaea HOM05D003850 ORTHO05D004515 2.8e-108 396.7 561 45.6
VMungo1215G3075 Vigna mungo HOM05D003850 ORTHO05D004515 2.8e-108 396.7 552 49.1
PSO210G4264 Papaver somniferum HOM05D003850 ORTHO05D004515 6.3e-108 395.6 566 49.1
Phvul.003G083500 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 6.3e-108 395.6 553 49.7
Prupe.4G011300 Prunus persica HOM05D003850 ORTHO05D004515 2.4e-107 393.7 550 48.0
Gohir.A06G153120 Gossypium hirsutum HOM05D003850 ORTHO05D004515 5.3e-107 392.5 555 52.6
Migut.M01390 Erythranthe guttata HOM05D003850 ORTHO05D004515 2.6e-106 390.2 554 47.5
Cc09_g00920 Coffea canephora HOM05D003850 ORTHO05D004515 4.5e-106 389.4 554 51.3
Nitab4.5_0001198g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 1.3e-105 387.9 550 49.1
Gorai.010G186300 Gossypium raimondii HOM05D003850 ORTHO05D004515 2.2e-105 387.1 555 52.1
VMungo0540G1287 Vigna mungo HOM05D003850 ORTHO05D004515 3.8e-105 386.3 552 47.1
RhsimUnG0025700 Rhododendron simsii HOM05D003850 ORTHO05D004515 5.0e-105 386.0 586 50.7
RhsimUnG0028500 Rhododendron simsii HOM05D003850 ORTHO05D004515 5.0e-105 386.0 586 50.7
Sopen11g006940 Solanum pennellii HOM05D003850 ORTHO05D004515 5.0e-105 386.0 559 49.0
vmacro15772 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 5.0e-105 386.0 561 56.0
COL.COLO4_31876 Corchorus olitorius HOM05D003850 ORTHO05D004515 1.5e-104 384.4 557 53.9
Sed0003006 Sechium edule HOM05D003850 ORTHO05D004515 3.2e-104 383.3 554 46.4
Glyma.15G114200 Glycine max HOM05D003850 ORTHO05D004515 4.2e-104 382.9 550 54.0
Gohir.D06G159600 Gossypium hirsutum HOM05D003850 ORTHO05D004515 4.2e-104 382.9 555 52.3
Oeu002760.2 Olea europaea HOM05D003850 ORTHO05D004515 9.4e-104 381.7 585 47.9
PSO302G0165 Papaver somniferum HOM05D003850 ORTHO05D004515 1.2e-103 381.3 546 54.2
arahy.Tifrunner.gnm1.ann1.97WSNQ Arachis hypogaea HOM05D003850 ORTHO05D004515 5.2e-102 375.9 556 48.6
CsaV3_3G028740 Cucumis sativus L. HOM05D003850 ORTHO05D004515 2.0e-101 374.0 579 43.5
ECA233G3046 Erigeron canadensis HOM05D003850 ORTHO05D004515 2.6e-101 373.6 551 52.6
ATR0751G086 Amborella trichopoda HOM05D003850 ORTHO05D004515 1.3e-100 371.3 553 47.6
Sabra06G0006900 Salix brachista HOM05D003850 ORTHO05D004515 1.7e-100 370.9 557 45.8
Nitab4.5_0000143g0310 Nicotiana tabacum HOM05D003850 ORTHO05D004515 3.1e-99 366.7 548 50.0
TPR.G3343 Trifolium pratense HOM05D003850 ORTHO05D004515 3.1e-99 366.7 568 48.8
AUR62021872 Chenopodium quinoa HOM05D003850 ORTHO05D004515 7.0e-99 365.5 551 42.6
Medtr2g025590 Medicago truncatula HOM05D003850 ORTHO05D004515 2.0e-98 364.0 547 48.3
Aa31LG9G10040 Aethionema arabicum HOM05D003850 ORTHO05D004515 3.5e-98 363.2 564 49.5
arahy.Tifrunner.gnm1.ann1.0C9QHL Arachis hypogaea HOM05D003850 ORTHO05D004515 4.5e-98 362.8 556 47.8
AL6G47570 Arabidopsis lyrata HOM05D003850 ORTHO05D004515 7.7e-98 362.1 550 48.0
Actinidia39269 Actinidia chinensis HOM05D003850 ORTHO05D004515 1.7e-97 360.9 365 59.5
MD05G1357300 Malus domestica HOM05D003850 ORTHO05D004515 5.0e-97 359.4 560 44.8
CiPaw.10G077600 Carya illinoinensis HOM05D003850 ORTHO05D004515 3.2e-96 356.7 508 46.7
C03p36090 Brassica napus HOM05D003850 ORTHO05D004515 5.5e-96 355.9 551 54.1
BcaC01g04577 Brassica carinata HOM05D003850 ORTHO05D004515 7.2e-96 355.5 553 54.2
BolC3t15918H Brassica oleracea HOM05D003850 ORTHO05D004515 7.2e-96 355.5 553 54.2
Cfa000110 Carpinus fangiana HOM05D003850 ORTHO05D004515 7.2e-96 355.5 548 47.1
ClCG07G001740 Citrullus lanatus HOM05D003850 ORTHO05D004515 9.4e-96 355.1 552 45.1
SGA_v2.0_scaffold4G01878 Striga asiatica HOM05D003850 ORTHO05D004515 3.6e-95 353.2 527 49.1
A03p29830 Brassica napus HOM05D003850 ORTHO05D004515 8.0e-95 352.1 551 53.5
Lj6g0013016 Lotus japonicus HOM05D003850 ORTHO05D004515 1.0e-94 351.7 549 54.1
AT4G12610 Arabidopsis thaliana HOM05D003850 ORTHO05D004515 1.4e-94 351.3 550 47.8
Haze_08659 Corylus avellana HOM05D003850 ORTHO05D004515 3.0e-94 350.1 594 42.4
BraA03t12173Z Brassica rapa HOM05D003850 ORTHO05D004515 2.0e-93 347.4 554 54.0
Peaxi162Scf00558g00516 Petunia axillaris HOM05D003850 ORTHO05D004515 1.3e-92 344.7 499 50.9
TWI63G0294 Tripterygium wilfordii HOM05D003850 ORTHO05D004515 2.2e-92 344.0 521 48.4
Carub.0006s3188 Capsella rubella HOM05D003850 ORTHO05D004515 3.7e-92 343.2 549 49.4
Sabra16G0017100 Salix brachista HOM05D003850 ORTHO05D004515 3.7e-92 343.2 581 40.6
Cpa.g.sc75.120 Carica papaya HOM05D003850 ORTHO05D004515 5.4e-91 339.3 549 46.6
PSO339G3925 Papaver somniferum HOM05D003850 ORTHO05D004515 1.6e-90 337.8 559 47.0
Sabra16G0000900 Salix brachista HOM05D003850 ORTHO05D004515 1.6e-90 337.8 559 40.4
vmacro03646 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 2.7e-90 337.0 572 42.8
FAN25G3770 Fragaria x ananassa HOM05D003850 ORTHO05D004515 3.5e-90 336.7 594 39.6
BraA09t38246Z Brassica rapa HOM05D003850 ORTHO05D004515 1.0e-89 335.1 550 48.7
BcaB01g02623 Brassica carinata HOM05D003850 ORTHO05D004515 1.7e-89 334.3 544 56.2
HanXRQChr15g0470091 Helianthus annuus HOM05D003850 ORTHO05D004515 1.7e-89 334.3 536 49.3
CARHR253560 Cardamine hirsuta HOM05D003850 ORTHO05D004515 6.5e-89 332.4 556 47.7
PGSC0003DMG400013344 Solanum tuberosum HOM05D003850 ORTHO05D004515 1.9e-88 330.9 522 48.3
Lj4g0025543 Lotus japonicus HOM05D003850 ORTHO05D004515 4.2e-88 329.7 551 42.6
BcaB01g01757 Brassica carinata HOM05D003850 ORTHO05D004515 5.5e-88 329.3 552 50.5
Solyc11g012150.3 Solanum lycopersicum HOM05D003850 ORTHO05D004515 1.6e-87 327.8 521 48.0
FvH4_3g01042 Fragaria vesca HOM05D003850 ORTHO05D004515 2.8e-87 327.0 566 39.8
Sp6g04900 Schrenkiella parvula HOM05D003850 ORTHO05D004515 3.6e-87 326.6 552 50.4
BolC9t56221H Brassica oleracea HOM05D003850 ORTHO05D004515 8.0e-87 325.5 546 45.6
Thhalv10028564m.g Eutrema salsugineum HOM05D003850 ORTHO05D004515 8.0e-87 325.5 549 48.5
Lj2A262G45 Lonicera japonica HOM05D003850 ORTHO05D004515 6.8e-86 322.4 523 46.7
A09p26740 Brassica napus HOM05D003850 ORTHO05D004515 8.9e-86 322.0 552 50.5
MD10G1331000 Malus domestica HOM05D003850 ORTHO05D004515 1.5e-85 321.2 518 46.3
Oeu044421.3 Olea europaea HOM05D003850 ORTHO05D004515 1.5e-85 321.2 317 56.8
SHI24464 Sapria himalayana HOM05D003850 ORTHO05D004515 7.5e-85 318.9 559 41.1
RhsimUnG0109100 Rhododendron simsii HOM05D003850 ORTHO05D004515 2.8e-84 317.0 430 47.9
AagrBONN_evm.TU.Sc2ySwM_228.4136 Anthoceros agrestis HOM05D003850 ORTHO05D004515 6.3e-84 315.8 378 52.6
Zm00001eb224360 Zea mays HOM05D003850 ORTHO05D004515 1.2e-82 311.6 507 44.2
RcHm_v2.0_Chr5g0001581 Rosa chinensis HOM05D003850 ORTHO05D004515 4.5e-82 309.7 566 40.6
FAN21G1422 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.0e-81 308.5 583 38.4
CAN.G1186.28 Capsicum annuum HOM05D003850 ORTHO05D004515 1.9e-80 304.3 559 41.9
unitig_748.g7103 Utricularia gibba HOM05D003850 ORTHO05D004515 2.5e-80 303.9 551 40.5
CDE06G1774 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 7.3e-80 302.4 320 54.1
BcaC04g21251 Brassica carinata HOM05D003850 ORTHO05D004515 2.8e-79 300.4 545 50.1
C09p33830 Brassica napus HOM05D003850 ORTHO05D004515 2.8e-79 300.4 545 50.1
Hund23984 Selenicereus undatus HOM05D003850 ORTHO05D004515 3.4e-77 293.5 563 45.5
Zm00001eb398520 Zea mays HOM05D003850 ORTHO05D004515 5.8e-77 292.7 553 38.0
CDE04G2591 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 7.5e-77 292.4 552 41.1
Lsat_1_v5_gn_7_13561 Lactuca sativa HOM05D003850 ORTHO05D004515 7.5e-77 292.4 503 49.3
Rhsim13G0146600 Rhododendron simsii HOM05D003850 ORTHO05D004515 9.8e-77 292.0 484 43.0
EL10Ac8g20176 Beta vulgaris HOM05D003850 ORTHO05D004515 7.0e-75 285.8 550 43.5
MELO3C012788.2 Cucumis melo HOM05D003850 ORTHO05D004515 1.5e-72 278.1 503 42.1
RcHm_v2.0_Chr5g0007791 Rosa chinensis HOM05D003850 ORTHO05D004515 1.9e-72 277.7 575 39.7
Lj8A171G42 Lonicera japonica HOM05D003850 ORTHO05D004515 2.6e-69 267.3 550 34.2
Psat1g176560 Pisum sativum HOM05D003850 ORTHO05D004515 1.3e-68 265.0 476 45.0
FvH4_2g22070 Fragaria vesca HOM05D003850 ORTHO05D004515 1.3e-65 255.0 563 35.9
FvH4_3g04782 Fragaria vesca HOM05D003850 ORTHO05D004515 9.5e-64 248.8 562 34.2
FAN11G3915 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.6e-63 248.1 562 34.7
Duzib235G1223 Durio zibethinus HOM05D003850 ORTHO05D004515 2.8e-63 247.3 425 51.5
FAN16G3024 Fragaria x ananassa HOM05D003850 ORTHO05D004515 8.1e-63 245.7 559 34.0
TPR.G34491 Trifolium pratense HOM05D003850 ORTHO05D004515 8.1e-63 245.7 196 58.2
FAN24G0125 Fragaria x ananassa HOM05D003850 ORTHO05D008045 1.1e-62 245.4 558 35.3
FAN03G2951 Fragaria x ananassa HOM05D003850 ORTHO05D004515 8.9e-62 242.3 559 35.1
FAN21G1676 Fragaria x ananassa HOM05D003850 ORTHO05D004515 8.9e-62 242.3 554 34.8
DCAR_025996 Daucus carota HOM05D003850 ORTHO05D004515 1.6e-58 231.5 479 43.0
AUR62012783 Chenopodium quinoa HOM05D003850 ORTHO05D004515 3.5e-58 230.3 434 39.9
SEGI_38016 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 1.1e-56 225.3 305 43.9
Medtr2g025620 Medicago truncatula HOM05D003850 ORTHO05D004515 7.3e-56 222.6 526 43.5
Peaxi162Scf00015g02110 Petunia axillaris HOM05D003850 ORTHO05D004515 7.1e-51 206.1 317 47.6
QL09p006300 Quercus lobata HOM05D003850 ORTHO05D004515 7.1e-51 206.1 375 47.7
Dinv07398 Davidia involucrata HOM05D003850 ORTHO05D004515 5.1e-49 199.9 301 57.8
TPR.G13041 Trifolium pratense HOM05D003850 ORTHO05D004515 2.0e-37 161.4 376 46.8
CBR_g38333 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-36 158.7 239 43.9
HPP92_001646 Vanilla planifolia HOM05D003850 ORTHO05D004515 8.4e-36 156.0 253 46.2
Sc17g0007710 Simmondsia chinensis HOM05D003850 ORTHO05D004515 6.9e-30 136.3 382 43.5
Actinidia11880 Actinidia chinensis HOM05D003850 ORTHO05D004515 6.0e-26 123.2 306 39.9
HPP92_001645 Vanilla planifolia HOM05D003850 ORTHO05D004515 5.1e-25 120.2 102 53.9
Lsat_1_v5_gn_5_64561 Lactuca sativa HOM05D003952 ORTHO05D004515 2.8e-23 114.4 158 55.1
FAN25G2646 Fragaria x ananassa HOM05D003850 ORTHO05D004515 3.7e-23 114.0 524 26.3
AagrBONN_evm.TU.Sc2ySwM_228.3786 Anthoceros agrestis HOM05D003850 ORTHO05D004515 3.4e-21 107.5 140 43.6
Gorai.002G145900 Gossypium raimondii HOM05D003850 ORTHO05D004515 1.3e-20 105.5 182 57.1
PSO339G5270 Papaver somniferum HOM05D003850 ORTHO05D004515 1.1e-14 85.9 213 33.8
RcHm_v2.0_Chr6g0288941 Rosa chinensis HOM05D003850 ORTHO05D004515 1.4e-14 85.5 290 31.7
Lsat_1_v5_gn_3_78300 Lactuca sativa HOM05D002115 ORTHO05D002263 1.2e-13 82.4 49 79.6
Eucgr.A01650 Eucalyptus grandis HOM05D002251 ORTHO05D004515 2.6e-13 81.3 53 62.3
HPP92_001647 Vanilla planifolia HOM05D003850 ORTHO05D004515 6.5e-12 76.6 65 53.8
Gohir.D01G119450 Gossypium hirsutum HOM05D003850 ORTHO05D004515 8.5e-12 76.3 110 57.3
AagrBONN_evm.TU.Sc2ySwM_228.3787 Anthoceros agrestis HOM05D003850 ORTHO05D004515 1.9e-11 75.1 319 39.2
TAR629G2548 Trochodendron aralioides HOM05D003850 ORTHO05D004515 9.4e-11 72.8 53 49.1
CBR_g38329 Chara braunii HOM05D003850 ORTHO05D004515 2.1e-10 71.6 64 51.6
VMungo0720G0179 Vigna mungo HOM05D003850 ORTHO05D004515 1.0e-09 69.3 52 53.8
CDE06G0619 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 2.3e-09 68.2 211 41.7
SEGI_29277 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 3.9e-09 67.4 212 32.1
PSO384G4333 Papaver somniferum HOM05D003850 ORTHO05D004515 2.0e-08 65.1 173 34.7
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 9.7e-08 62.8 59 52.5
Nitab4.5_0013082g0020 Nicotiana tabacum HOM05D003850 ORTHO05D004515 3.7e-07 60.8 75 45.3
arahy.Tifrunner.gnm1.ann1.N7GRQP Arachis hypogaea HOM05D003850 ORTHO05D004515 4.8e-07 60.5 67 47.8
arahy.Tifrunner.gnm1.ann1.UE8YUV Arachis hypogaea HOM05D003850 ORTHO05D004515 4.8e-07 60.5 67 47.8
PSO339G0182 Papaver somniferum HOM05D009217 ORTHO05D009626 1.4e-06 58.9 66 48.5
arahy.Tifrunner.gnm1.ann1.5H9H8Z Arachis hypogaea HOM05D003850 ORTHO05D004515 1.8e-06 58.5 67 47.8
arahy.Tifrunner.gnm1.ann1.4A53N1 Arachis hypogaea HOM05D003850 ORTHO05D004515 2.4e-06 58.2 70 47.1


User provided reference genes

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