Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0054s0019 Marchantia polymorpha HOM05D005431 ORTHO05D006762 2.6e-150 535.4 286 100.0
Pp3c5_17010 Physcomitrium patens HOM05D005431 ORTHO05D006762 2.1e-62 243.4 276 52.2
MD03G1112900 Malus domestica HOM05D005431 ORTHO05D006762 7.9e-62 241.5 284 52.1
TAR633G0900 Trochodendron aralioides HOM05D005431 ORTHO05D006762 9.6e-60 234.6 288 53.8
Prupe.6G097200 Prunus persica HOM05D005431 ORTHO05D006762 1.3e-59 234.2 283 51.6
Glyma.16G042800 Glycine max HOM05D005431 ORTHO05D006762 2.1e-59 233.4 283 50.2
Phvul.001G100700 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 4.8e-59 232.3 279 49.8
Actinidia02566 Actinidia chinensis HOM05D005431 ORTHO05D006762 8.2e-59 231.5 290 51.0
Rhsim06G0113900 Rhododendron simsii HOM05D005431 ORTHO05D006762 1.1e-58 231.1 289 51.6
QL07p020652 Quercus lobata HOM05D005431 ORTHO05D006762 3.1e-58 229.6 283 51.6
Lj1A1139T47 Lonicera japonica HOM05D005431 ORTHO05D006762 5.3e-58 228.8 284 50.7
ATR0782G102 Amborella trichopoda HOM05D005431 ORTHO05D006762 6.9e-58 228.4 288 50.3
Glyma.19G109200 Glycine max HOM05D005431 ORTHO05D006762 6.9e-58 228.4 283 48.8
HanXRQChr02g0054501 Helianthus annuus HOM05D005431 ORTHO05D006762 9.0e-58 228.0 283 50.5
Sed0005030 Sechium edule HOM05D005431 ORTHO05D006762 1.5e-57 227.3 288 49.7
Zm00001eb015560 Zea mays HOM05D005431 ORTHO05D006762 2.0e-57 226.9 277 51.6
Dinv18088 Davidia involucrata HOM05D005431 ORTHO05D006762 2.6e-57 226.5 292 49.3
Oeu051845.1 Olea europaea HOM05D005431 ORTHO05D006762 2.6e-57 226.5 287 48.8
CSS0010563 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 7.6e-57 224.9 281 52.0
CiPaw.10G000400 Carya illinoinensis HOM05D005431 ORTHO05D006762 1.0e-56 224.6 287 50.9
vmacro12472 Vaccinium macrocarpon HOM05D005431 ORTHO05D006762 1.0e-56 224.6 294 49.7
Sc24g0002060 Simmondsia chinensis HOM05D005431 ORTHO05D006762 2.2e-56 223.4 285 49.1
PSO339G6142 Papaver somniferum HOM05D005431 ORTHO05D006762 2.9e-56 223.0 288 49.3
ECA233G5562 Erigeron canadensis HOM05D005431 ORTHO05D006762 3.8e-56 222.6 283 51.6
Lj1g0019204 Lotus japonicus HOM05D005431 ORTHO05D006762 3.8e-56 222.6 284 46.8
Thecc.05G259000 Theobroma cacao HOM05D005431 ORTHO05D006762 3.8e-56 222.6 288 47.9
Migut.C00530 Erythranthe guttata HOM05D005431 ORTHO05D006762 5.0e-56 222.2 278 50.4
Aqoxy6G02574 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 6.5e-56 221.9 285 49.5
Eucgr.A02076 Eucalyptus grandis HOM05D005431 ORTHO05D006762 6.5e-56 221.9 290 48.3
Lalb_Chr14g0364381 Lupinus albus HOM05D005431 ORTHO05D006762 6.5e-56 221.9 283 52.3
HPP92_006679 Vanilla planifolia HOM05D005431 ORTHO05D006762 6.5e-56 221.9 283 48.8
Lsat_1_v5_gn_6_37921 Lactuca sativa HOM05D005431 ORTHO05D006762 8.5e-56 221.5 275 51.3
Aqoxy2G02389 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.4e-55 220.7 285 49.5
Manes.08G148100 Manihot esculenta HOM05D005431 ORTHO05D006762 2.5e-55 219.9 284 50.7
GSVIVG01020933001 Vitis vinifera HOM05D005431 ORTHO05D006762 3.2e-55 219.5 284 50.7
AagrBONN_evm.TU.Sc2ySwM_228.5426 Anthoceros agrestis HOM05D005431 ORTHO05D006762 5.5e-55 218.8 278 46.4
COL.COLO4_08630 Corchorus olitorius HOM05D005431 ORTHO05D006762 9.3e-55 218.0 292 47.9
Gohir.A11G240400 Gossypium hirsutum HOM05D005431 ORTHO05D006762 9.3e-55 218.0 290 47.9
CSS0005177 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 2.3e-53 213.4 281 50.2
CDE02G0906 Ceratophyllum demersum HOM05D005431 ORTHO05D006762 2.3e-53 213.4 287 48.1
Gohir.D11G249800 Gossypium hirsutum HOM05D005431 ORTHO05D006762 3.0e-53 213.0 288 47.2
TWI32G0483 Tripterygium wilfordii HOM05D005431 ORTHO05D006762 3.0e-53 213.0 278 48.9
Gorai.007G267600 Gossypium raimondii HOM05D005431 ORTHO05D006762 3.9e-53 212.6 288 47.2
PSO384G4368 Papaver somniferum HOM05D005431 ORTHO05D006762 3.9e-53 212.6 286 48.6
SMO339G0047 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 3.9e-53 212.6 271 50.9
arahy.Tifrunner.gnm1.ann1.UBW8VJ Arachis hypogaea HOM05D005431 ORTHO05D006762 8.7e-53 211.5 281 48.8
MSTRG.16956 Avicennia marina HOM05D005431 ORTHO05D006762 1.5e-52 210.7 284 46.8
Os03g0326600 Oryza sativa ssp. japonica HOM05D005431 ORTHO05D006762 1.9e-52 210.3 286 47.9
Ciclev10020067m.g Citrus clementina HOM05D005431 ORTHO05D006762 2.5e-52 209.9 289 46.7
AUR62035802 Chenopodium quinoa HOM05D005431 ORTHO05D006762 3.3e-52 209.5 281 49.8
MBI13_g30325_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 3.3e-52 209.5 286 49.7
Solyc01g110820.4 Solanum lycopersicum HOM05D005431 ORTHO05D006762 3.3e-52 209.5 284 45.1
Medtr7g085290 Medicago truncatula HOM05D005431 ORTHO05D006762 5.7e-52 208.8 284 46.5
PGR042G1130 Punica granatum HOM05D005431 ORTHO05D006762 5.7e-52 208.8 287 47.4
SalBow1G3497 Salvia bowleyana HOM05D005431 ORTHO05D006762 7.4e-52 208.4 278 47.8
FvH4_3g32950 Fragaria vesca HOM05D005431 ORTHO05D006762 2.2e-51 206.8 281 47.7
EL10Ac8g19795 Beta vulgaris HOM05D005431 ORTHO05D006762 3.7e-51 206.1 281 48.4
GSVIVG01010770001 Vitis vinifera HOM05D005431 ORTHO05D006762 4.8e-51 205.7 272 50.0
Atru.chr2.1265 Acer truncatum HOM05D005431 ORTHO05D006762 1.4e-50 204.1 291 46.4
FAN16G2474 Fragaria x ananassa HOM05D005431 ORTHO05D006762 2.4e-50 203.4 282 46.8
CANSAT78G0764 Cannabis sativa HOM05D005431 ORTHO05D006762 4.1e-50 202.6 279 48.0
Sabra13G0049000 Salix brachista HOM05D005431 ORTHO05D006762 4.1e-50 202.6 282 48.2
Ca_08254_v3 Cicer arietinum L. HOM05D005431 ORTHO05D006762 1.5e-49 200.7 274 45.6
BraA06t23807Z Brassica rapa HOM05D005431 ORTHO05D006762 1.7e-48 197.2 278 46.8
VMungo1383G2520 Vigna mungo HOM05D005431 ORTHO05D006762 1.7e-48 197.2 261 47.1
Duzib177G0804 Durio zibethinus HOM05D005431 ORTHO05D006762 2.2e-48 196.8 279 45.9
Peaxi162Scf00362g01188 Petunia axillaris HOM05D005431 ORTHO05D006762 2.2e-48 196.8 284 43.0
PGSC0003DMG400001606 Solanum tuberosum HOM05D005431 ORTHO05D006762 2.9e-48 196.4 284 43.3
FAN11G0735 Fragaria x ananassa HOM05D005431 ORTHO05D006762 3.8e-48 196.1 274 46.7
RcHm_v2.0_Chr5g0060221 Rosa chinensis HOM05D005431 ORTHO05D006762 5.0e-48 195.7 276 45.3
AT1G09230 Arabidopsis thaliana HOM05D005431 ORTHO05D006762 8.5e-48 194.9 279 46.2
Potri.013G054300 Populus trichocarpa HOM05D005431 ORTHO05D006762 8.5e-48 194.9 283 47.3
BolC5t29482H Brassica oleracea HOM05D005431 ORTHO05D006762 3.2e-47 193.0 276 46.0
Cc10_g14020 Coffea canephora HOM05D005431 ORTHO05D006762 3.2e-47 193.0 273 46.2
SGA_v2.0_scaffold32G13347 Striga asiatica HOM05D005431 ORTHO05D006762 3.2e-47 193.0 286 42.7
Thhalv10007645m.g Eutrema salsugineum HOM05D005431 ORTHO05D006762 4.2e-47 192.6 275 45.1
SEGI_41626 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 1.6e-46 190.7 280 48.6
Sopen01g052890 Solanum pennellii HOM05D005431 ORTHO05D006762 3.6e-46 189.5 275 42.9
AagrBONN_evm.TU.Sc2ySwM_117.3064__3065 Anthoceros agrestis HOM05D005431 ORTHO05D006762 7.9e-46 188.3 256 47.7
CARHR009190 Cardamine hirsuta HOM05D005431 ORTHO05D006762 1.4e-45 187.6 275 45.5
A06p05970 Brassica napus HOM05D005431 ORTHO05D006762 1.8e-45 187.2 277 42.6
Sp1g07840 Schrenkiella parvula HOM05D005431 ORTHO05D006762 3.0e-45 186.4 275 44.4
THA.LOC104805792 Tarenaya hassleriana HOM05D005431 ORTHO05D006762 3.9e-45 186.0 276 43.8
Nn7g35775 Nelumbo nucifera HOM05D005431 ORTHO05D006762 1.1e-44 184.5 208 54.3
Nitab4.5_0001364g0090 Nicotiana tabacum HOM05D005431 ORTHO05D006762 9.7e-44 181.4 259 44.8
TPR.G5901 Trifolium pratense HOM05D005431 ORTHO05D006762 9.7e-44 181.4 327 39.8
C05p07240 Brassica napus HOM05D005431 ORTHO05D006762 1.7e-43 180.6 275 43.3
CsaV3_6G010080 Cucumis sativus L. HOM05D005431 ORTHO05D006762 1.8e-42 177.2 270 44.4
AUR62027554 Chenopodium quinoa HOM05D005431 ORTHO05D006762 2.4e-42 176.8 215 50.2
Psat3g089720 Pisum sativum HOM05D005431 ORTHO05D006762 3.1e-42 176.4 281 42.7
Cfa016425 Carpinus fangiana HOM05D005431 ORTHO05D006762 1.0e-40 171.4 258 47.3
Carub.0001s0857 Capsella rubella HOM05D005431 ORTHO05D006762 1.3e-40 171.0 275 41.5
arahy.Tifrunner.gnm1.ann1.M3GFZ7 Arachis hypogaea HOM05D005431 ORTHO05D006762 1.1e-39 167.9 279 41.2
AL1G19720 Arabidopsis lyrata HOM05D005431 ORTHO05D006762 1.2e-38 164.5 275 41.8
Haze_19398 Corylus avellana HOM05D005431 ORTHO05D006762 1.4e-37 161.0 280 43.2
Aa31LG1G5950 Aethionema arabicum HOM05D005431 ORTHO05D006762 1.1e-36 157.9 298 38.3
BcaC05g24779 Brassica carinata HOM05D005431 ORTHO05D006762 2.0e-36 157.1 283 39.6
Duzib128G1128 Durio zibethinus HOM05D005431 ORTHO05D006762 1.3e-32 144.4 286 40.6
ClCG02G009850 Citrullus lanatus HOM05D005431 ORTHO05D006762 2.7e-30 136.7 238 42.4
arahy.Tifrunner.gnm1.ann1.H79Q9S Arachis hypogaea HOM05D005431 ORTHO05D006762 8.0e-30 135.2 280 38.6
CBR_g41665 Chara braunii HOM05D005431 ORTHO05D006762 4.0e-29 132.9 277 38.6
Cfa011866 Carpinus fangiana HOM05D005431 ORTHO05D006762 5.2e-29 132.5 215 45.1
Haze_21236 Corylus avellana HOM05D005431 ORTHO05D006762 2.6e-28 130.2 215 44.7
Phvul.004G137800 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 2.2e-27 127.1 102 55.9
Hund08530 Selenicereus undatus HOM05D005431 ORTHO05D006762 2.4e-26 123.6 108 59.3
Cpa.g.sc3384.1 Carica papaya HOM05D005431 ORTHO05D006762 3.1e-26 123.2 98 60.2
Rhsim03G0115400 Rhododendron simsii HOM05D005431 ORTHO05D006762 9.4e-23 111.7 220 39.5
Cpa.g.sc594.2 Carica papaya HOM05D005431 ORTHO05D006762 7.0e-18 95.5 184 42.9
Pp3c25_8310 Physcomitrium patens HOM05D005431 ORTHO05D006762 4.5e-17 92.8 117 43.6
MBI05_g45098_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 2.5e-15 87.0 193 39.9
Potri.019G031700 Populus trichocarpa HOM05D005431 ORTHO05D006762 9.5e-15 85.1 153 46.4
AagrBONN_evm.TU.Sc2ySwM_228.2880 Anthoceros agrestis HOM05D005431 ORTHO05D006762 2.1e-14 84.0 138 39.9
Hund08532 Selenicereus undatus HOM05D005431 ORTHO05D006762 1.8e-13 80.9 190 40.0
MELO3C013491.2 Cucumis melo HOM05D005431 ORTHO05D006762 3.0e-13 80.1 189 37.6
MBI05_g33993_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 6.8e-13 79.0 97 44.3
SMO116G0263 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 2.0e-12 77.4 85 47.1
Lsat_1_v5_gn_3_133701 Lactuca sativa HOM05D005431 ORTHO05D006762 6.3e-11 72.4 174 37.4
TPR.G552 Trifolium pratense HOM05D005431 ORTHO05D006762 8.3e-11 72.0 111 43.2
SHI14712 Sapria himalayana HOM05D000001 ORTHO05D009229 1.7e-08 64.3 43 67.4
TPR.G5921 Trifolium pratense HOM05D005431 ORTHO05D006762 2.3e-08 63.9 48 58.3
Aqoxy113s003 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 3.8e-08 63.2 118 37.3
C08p12570 Brassica napus HOM05D005431 ORTHO05D006762 1.9e-07 60.8 58 50.0
BolC8t48895H Brassica oleracea HOM05D005431 ORTHO05D006762 1.9e-07 60.8 58 50.0
SGA_v2.0_scaffold612G53193 Striga asiatica HOM05D005431 ORTHO05D006762 9.5e-07 58.5 49 57.1
Thhalv10001603m.g Eutrema salsugineum HOM05D002411 ORTHO05D002564 3.6e-06 56.6 103 30.1
SHI14714 Sapria himalayana HOM05D005431 ORTHO05D006762 3.6e-06 56.6 49 51.0
SEGI_34663 Sequoiadendron giganteum HOM05D002411 ORTHO05D002564 4.7e-06 56.2 102 30.4


User provided reference genes

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