Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0036s0055 Marchantia polymorpha HOM05D006129 ORTHO05D007446 0.0e+00 1673.7 982 100.0
Pp3c25_10050 Physcomitrium patens HOM05D006129 ORTHO05D007446 3.8e-124 450.3 734 34.9
AagrBONN_evm.TU.Sc2ySwM_344.5085 Anthoceros agrestis HOM05D006129 ORTHO05D007446 1.1e-97 362.5 662 47.3
SEGI_31419 Sequoiadendron giganteum HOM05D006129 ORTHO05D007446 2.3e-84 318.2 660 29.2
SMO356G0628 Selaginella moellendorffii HOM05D006129 ORTHO05D007446 1.2e-77 295.8 654 29.5
CiPaw.05G055300 Carya illinoinensis HOM05D006129 ORTHO05D007446 5.6e-75 287.0 707 27.2
Haze_01881 Corylus avellana HOM05D006129 ORTHO05D007446 2.1e-74 285.0 712 27.0
TWI31G0609 Tripterygium wilfordii HOM05D006129 ORTHO05D007446 9.0e-73 279.6 708 26.7
Potri.009G106800 Populus trichocarpa HOM05D006129 ORTHO05D007446 2.0e-72 278.5 760 26.6
Nn4g23272 Nelumbo nucifera HOM05D006129 ORTHO05D007446 3.4e-72 277.7 705 26.0
Cfa005424 Carpinus fangiana HOM05D006129 ORTHO05D007446 4.5e-72 277.3 712 26.7
Nitab4.5_0007303g0010 Nicotiana tabacum HOM05D006129 ORTHO05D007446 4.5e-72 277.3 661 28.3
QL11p038411 Quercus lobata HOM05D006129 ORTHO05D007446 9.9e-72 276.2 681 28.3
TWI79G0519 Tripterygium wilfordii HOM05D006129 ORTHO05D007446 1.7e-71 275.4 711 26.7
Aqoxy3G03484 Aquilegia oxysepala HOM05D006129 ORTHO05D007446 2.2e-71 275.0 661 26.8
Gohir.A01G005900 Gossypium hirsutum HOM05D006129 ORTHO05D007446 2.9e-71 274.6 719 28.7
Gohir.D01G006000 Gossypium hirsutum HOM05D006129 ORTHO05D007446 1.1e-70 272.7 666 29.0
CsaV3_3G028800 Cucumis sativus L. HOM05D006129 ORTHO05D007446 2.4e-70 271.6 650 27.7
DCAR_003623 Daucus carota HOM05D006129 ORTHO05D007446 3.2e-70 271.2 660 27.3
Gorai.002G007000 Gossypium raimondii HOM05D006129 ORTHO05D007446 5.4e-70 270.4 666 28.7
CAN.G644.34 Capsicum annuum HOM05D006129 ORTHO05D007446 9.3e-70 269.6 659 27.2
Medtr1g026035 Medicago truncatula HOM05D006129 ORTHO05D007446 9.3e-70 269.6 664 26.1
PGR042G1055 Punica granatum HOM05D006129 ORTHO05D007446 1.2e-69 269.2 664 27.9
GSVIVG01031785001 Vitis vinifera HOM05D006129 ORTHO05D007446 2.7e-69 268.1 727 26.5
Prupe.8G116000 Prunus persica HOM05D006129 ORTHO05D007446 6.0e-69 266.9 658 26.7
MELO3C026699.2 Cucumis melo HOM05D006129 ORTHO05D007446 7.9e-69 266.5 650 27.7
RcHm_v2.0_Chr6g0259211 Rosa chinensis HOM05D006129 ORTHO05D007446 7.9e-69 266.5 661 26.2
MSTRG.20134 Avicennia marina HOM05D006129 ORTHO05D007446 1.0e-68 266.2 657 26.6
ClCG07G001810 Citrullus lanatus HOM05D006129 ORTHO05D007446 1.0e-68 266.2 661 27.4
Dinv42121 Davidia involucrata HOM05D006129 ORTHO05D007446 1.0e-68 266.2 672 26.3
Lj2g0010354 Lotus japonicus HOM05D006129 ORTHO05D007446 1.0e-68 266.2 663 25.9
Pp3c16_23700 Physcomitrium patens HOM05D006129 ORTHO05D007446 1.3e-68 265.8 771 35.4
CSS0025307 Camellia sinensis var. sinensis HOM05D006129 ORTHO05D007446 1.8e-68 265.4 670 26.6
CSS0048591 Camellia sinensis var. sinensis HOM05D006129 ORTHO05D007446 1.8e-68 265.4 670 26.6
COL.COLO4_11724 Corchorus olitorius HOM05D006129 ORTHO05D007446 1.8e-68 265.4 710 25.8
Thecc.02G095400 Theobroma cacao HOM05D006129 ORTHO05D007446 5.1e-68 263.8 714 26.2
Migut.B00306 Erythranthe guttata HOM05D006129 ORTHO05D007446 8.7e-68 263.1 659 26.9
Solyc11g066850.3 Solanum lycopersicum HOM05D006129 ORTHO05D007446 1.1e-67 262.7 659 26.7
Ca_13480_v3 Cicer arietinum L. HOM05D006129 ORTHO05D007446 2.5e-67 261.5 681 25.4
Sed0004701 Sechium edule HOM05D006129 ORTHO05D007446 2.5e-67 261.5 658 26.7
FvH4_2g06900 Fragaria vesca HOM05D006129 ORTHO05D007446 5.6e-67 260.4 661 26.0
FAN27G0179 Fragaria x ananassa HOM05D006129 ORTHO05D007446 5.6e-67 260.4 661 26.2
HanXRQChr10g0303221 Helianthus annuus HOM05D006129 ORTHO05D007446 7.4e-67 260.0 672 26.6
TPR.G26422 Trifolium pratense HOM05D006129 ORTHO05D007446 7.4e-67 260.0 673 27.0
Peaxi162Scf00789g00530 Petunia axillaris HOM05D006129 ORTHO05D007446 9.6e-67 259.6 660 26.5
Duzib248G0151 Durio zibethinus HOM05D006129 ORTHO05D007446 1.3e-66 259.2 731 26.1
FAN15G2181 Fragaria x ananassa HOM05D006129 ORTHO05D007446 1.6e-66 258.8 662 26.3
MD10G1089000 Malus domestica HOM05D006129 ORTHO05D007446 2.1e-66 258.5 651 26.6
Atru.BG.82.p Acer truncatum HOM05D006129 ORTHO05D007446 2.8e-66 258.1 657 26.9
CANSAT25G2181 Cannabis sativa HOM05D006129 ORTHO05D007446 2.8e-66 258.1 661 25.6
FAN24G2628 Fragaria x ananassa HOM05D006129 ORTHO05D007446 4.8e-66 257.3 661 25.9
Sp3g29130 Schrenkiella parvula HOM05D006129 ORTHO05D007446 1.1e-65 256.1 659 26.4
VMungo0464G0688 Vigna mungo HOM05D006129 ORTHO05D007446 1.1e-65 256.1 662 26.1
Dinv23594 Davidia involucrata HOM05D006129 ORTHO05D007446 1.4e-65 255.8 662 26.1
unitig_744.g24241 Utricularia gibba HOM05D006129 ORTHO05D007446 1.8e-65 255.4 658 25.8
THA.LOC104807348 Tarenaya hassleriana HOM05D006129 ORTHO05D007446 2.4e-65 255.0 660 26.7
Lsat_1_v5_gn_5_113460 Lactuca sativa HOM05D006129 ORTHO05D007446 4.0e-65 254.2 681 25.8
vmacro02172 Vaccinium macrocarpon HOM05D006129 ORTHO05D007446 6.9e-65 253.4 677 26.7
BcaC06g36090 Brassica carinata HOM05D006129 ORTHO05D007446 1.2e-64 252.7 659 26.6
C07p07940 Brassica napus HOM05D006129 ORTHO05D007446 1.2e-64 252.7 659 26.6
BolC7t41212H Brassica oleracea HOM05D006129 ORTHO05D007446 1.2e-64 252.7 659 26.6
A07p04960 Brassica napus HOM05D006129 ORTHO05D007446 1.5e-64 252.3 659 25.9
Lj5P206T15 Lonicera japonica HOM05D006129 ORTHO05D007446 1.5e-64 252.3 650 25.2
Cpa.g.sc62.53 Carica papaya HOM05D006129 ORTHO05D007446 2.6e-64 251.5 683 25.5
Glyma.20G009700 Glycine max HOM05D006129 ORTHO05D007446 2.6e-64 251.5 651 25.3
HPP92_022045 Vanilla planifolia HOM05D006129 ORTHO05D007446 4.5e-64 250.8 659 24.9
Thhalv10022548m.g Eutrema salsugineum HOM05D006129 ORTHO05D007446 5.8e-64 250.4 659 26.1
Rhsim11G0169300 Rhododendron simsii HOM05D006129 ORTHO05D007446 5.8e-64 250.4 665 27.2
Manes.17G094600 Manihot esculenta HOM05D006129 ORTHO05D007446 7.6e-64 250.0 662 25.7
Oeu057674.1 Olea europaea HOM05D006129 ORTHO05D007446 1.7e-63 248.8 687 26.2
BraA07t28289Z Brassica rapa HOM05D006129 ORTHO05D007446 2.2e-63 248.4 659 25.6
Nitab4.5_0001453g0090 Nicotiana tabacum HOM05D006129 ORTHO05D007446 2.2e-63 248.4 691 25.9
TAR371G0476 Trochodendron aralioides HOM05D006129 ORTHO05D007446 2.2e-63 248.4 620 27.1
Lalb_Chr10g0095451 Lupinus albus HOM05D006129 ORTHO05D007446 2.9e-63 248.1 658 25.8
Phvul.002G308800 Phaseolus vulgaris HOM05D006129 ORTHO05D007446 2.9e-63 248.1 662 25.4
Glyma.07G178800 Glycine max HOM05D006129 ORTHO05D007446 3.8e-63 247.7 664 24.7
Carub.0003s2972 Capsella rubella HOM05D006129 ORTHO05D007446 1.4e-62 245.7 659 25.9
arahy.Tifrunner.gnm1.ann1.769PPM Arachis hypogaea HOM05D006129 ORTHO05D007446 2.5e-62 245.0 661 25.7
ATR0665G475 Amborella trichopoda HOM05D006129 ORTHO05D007446 7.1e-62 243.4 662 25.4
BcaB03g16332 Brassica carinata HOM05D006129 ORTHO05D007446 1.2e-61 242.7 659 25.3
AagrBONN_evm.TU.Sc2ySwM_344.1734 Anthoceros agrestis HOM05D006129 ORTHO05D007446 3.5e-61 241.1 680 25.4
Sopen11g026560 Solanum pennellii HOM05D006129 ORTHO05D007446 3.5e-61 241.1 637 26.2
PGSC0003DMG400026525 Solanum tuberosum HOM05D006129 ORTHO05D007446 3.5e-61 241.1 637 26.1
ECA234G4125 Erigeron canadensis HOM05D006129 ORTHO05D007446 7.9e-61 240.0 672 25.7
Ciclev10027854m.g Citrus clementina HOM05D006129 ORTHO05D007446 1.8e-60 238.8 650 25.5
Zm00001eb251880 Zea mays HOM05D006129 ORTHO05D007446 2.3e-60 238.4 654 25.5
SGA_v2.0_scaffold58G20604 Striga asiatica HOM05D006129 ORTHO05D007446 3.0e-60 238.0 665 26.5
AT2G15820 Arabidopsis thaliana HOM05D006129 ORTHO05D007446 3.9e-60 237.7 661 26.2
Eucgr.L01320 Eucalyptus grandis HOM05D006129 ORTHO05D007446 5.1e-60 237.3 650 26.0
EL10Ac9g21818 Beta vulgaris HOM05D006129 ORTHO05D007446 6.7e-60 236.9 700 25.4
CARHR106180 Cardamine hirsuta HOM05D006129 ORTHO05D007446 6.7e-60 236.9 662 26.3
Aa31LG8G13380 Aethionema arabicum HOM05D006129 ORTHO05D007446 1.5e-59 235.7 672 25.4
AL3G47590 Arabidopsis lyrata HOM05D006129 ORTHO05D007446 1.9e-59 235.3 665 25.6
Os02g0702000 Oryza sativa ssp. japonica HOM05D006129 ORTHO05D007446 1.6e-58 232.3 650 24.0
Sc08g0000140 Simmondsia chinensis HOM05D006129 ORTHO05D007446 4.8e-58 230.7 660 25.5
AUR62011424 Chenopodium quinoa HOM05D006129 ORTHO05D007446 4.0e-57 227.6 662 25.2
Ah.01g006750 Amaranthus hybridus HOM05D006129 ORTHO05D007446 1.7e-55 222.2 661 26.0
Actinidia12976 Actinidia chinensis HOM05D006129 ORTHO05D007446 1.6e-53 215.7 663 24.4
AUR62016636 Chenopodium quinoa HOM05D006129 ORTHO05D007446 4.3e-51 207.6 585 25.8
FAN20G2787 Fragaria x ananassa HOM05D006129 ORTHO05D007446 1.5e-48 199.1 590 25.1
Psat6g001360 Pisum sativum HOM05D006129 ORTHO05D007446 2.2e-47 195.3 663 23.2
Medtr0381s0010 Medicago truncatula HOM05D006129 ORTHO05D007446 4.2e-46 191.0 595 24.2
Sabra09G0081600 Salix brachista HOM05D006129 ORTHO05D007446 2.1e-45 188.7 560 25.0
Eucgr.G01504 Eucalyptus grandis HOM05D006129 ORTHO05D007446 8.2e-42 176.8 664 23.0
Eucgr.L00820 Eucalyptus grandis HOM05D006129 ORTHO05D007446 2.9e-39 168.3 272 34.2
CDE04G1903 Ceratophyllum demersum HOM05D006129 ORTHO05D007446 5.5e-38 164.1 279 32.3
TAR629G1168 Trochodendron aralioides HOM05D006129 ORTHO05D007446 2.7e-37 161.8 527 23.5
Hund00318 Selenicereus undatus HOM05D006129 ORTHO05D007446 9.1e-33 146.7 279 30.8
Atru.chr5.2823 Acer truncatum HOM05D006129 ORTHO05D007446 1.7e-31 142.5 300 30.3
Atru.chr5.2881 Acer truncatum HOM05D006129 ORTHO05D007446 6.5e-31 140.6 254 29.9
CBR_g8924 Chara braunii HOM05D006129 ORTHO05D007446 6.5e-31 140.6 223 37.2
Cc02_g18440 Coffea canephora HOM05D006129 ORTHO05D007446 4.2e-30 137.9 263 31.2
Atru.chr5.2887 Acer truncatum HOM05D006129 ORTHO05D007446 5.5e-30 137.5 224 32.1
Atru.chr5.2826 Acer truncatum HOM05D006129 ORTHO05D007446 3.0e-28 131.7 243 30.9
TAR371G0058 Trochodendron aralioides HOM05D006129 ORTHO05D007446 9.1e-25 120.2 247 30.0
TAR629G1760 Trochodendron aralioides HOM05D006129 ORTHO05D007446 1.1e-22 113.2 116 44.0
TAR371G0992 Trochodendron aralioides HOM05D006129 ORTHO05D007446 1.6e-21 109.4 279 27.6
arahy.Tifrunner.gnm1.ann1.SUMB0F Arachis hypogaea HOM05D006129 ORTHO05D007446 8.5e-15 87.0 94 42.6
Cc02_g18430 Coffea canephora HOM05D006129 ORTHO05D007446 1.5e-11 76.3 80 40.0
QL11p038542 Quercus lobata HOM05D006129 ORTHO05D007446 1.2e-08 66.6 152 29.6
Atru.chr5.2820 Acer truncatum HOM05D006129 ORTHO05D007446 3.3e-06 58.5 62 40.3
QL11p038477 Quercus lobata HOM05D006129 ORTHO05D007446 7.2e-06 57.4 114 29.8


User provided reference genes

Program Settings