Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0002s0007 Marchantia polymorpha HOM05D006329 ORTHO05D008357 1.3e-261 906.0 512 100.0
Pp3c7_13640 Physcomitrium patens HOM05D006329 ORTHO05D008357 1.1e-103 381.3 278 70.1
Migut.F01702 Erythranthe guttata HOM05D006329 ORTHO05D008357 1.0e-96 358.2 263 66.5
SalBow6G7241 Salvia bowleyana HOM05D006329 ORTHO05D008357 2.3e-96 357.1 267 65.2
Cc02_g10940 Coffea canephora HOM05D006329 ORTHO05D008357 7.4e-95 352.1 268 63.4
Nitab4.5_0001659g0150 Nicotiana tabacum HOM05D006329 ORTHO05D008357 1.3e-94 351.3 267 62.5
MBI18_g02633_MAGBIO Magnolia biondii HOM05D006329 ORTHO05D008357 2.2e-94 350.5 274 61.3
THA.LOC104824234 Tarenaya hassleriana HOM05D006329 ORTHO05D008357 8.2e-94 348.6 258 66.7
CDE03G0204 Ceratophyllum demersum HOM05D006329 ORTHO05D008357 1.1e-93 348.2 265 63.4
Gohir.D10G211400 Gossypium hirsutum HOM05D006329 ORTHO05D008357 1.1e-93 348.2 267 64.4
Gorai.011G237100 Gossypium raimondii HOM05D006329 ORTHO05D008357 1.1e-93 348.2 267 64.4
PGSC0003DMG400007434 Solanum tuberosum HOM05D006329 ORTHO05D008357 1.1e-93 348.2 267 62.5
MSTRG.389 Avicennia marina HOM05D006329 ORTHO05D008357 1.4e-93 347.8 266 63.9
Zm00001eb004240 Zea mays HOM05D006329 ORTHO05D008357 1.4e-93 347.8 276 64.1
Gohir.A10G203300 Gossypium hirsutum HOM05D006329 ORTHO05D008357 1.8e-93 347.4 267 64.0
Solyc11g008360.3 Solanum lycopersicum HOM05D006329 ORTHO05D008357 1.8e-93 347.4 267 62.5
Ah.02g128110 Amaranthus hybridus HOM05D006329 ORTHO05D008357 2.4e-93 347.1 260 63.8
Lsat_1_v5_gn_2_113040 Lactuca sativa HOM05D006329 ORTHO05D008357 2.4e-93 347.1 264 64.8
Nitab4.5_0001450g0040 Nicotiana tabacum HOM05D006329 ORTHO05D008357 2.4e-93 347.1 267 61.8
EL10Ac6g14260 Beta vulgaris HOM05D006329 ORTHO05D008357 3.1e-93 346.7 266 62.8
Sopen11g004170 Solanum pennellii HOM05D006329 ORTHO05D008357 5.3e-93 345.9 267 62.5
HanXRQChr14g0456591 Helianthus annuus HOM05D006329 ORTHO05D008357 6.9e-93 345.5 270 62.6
COL.COLO4_17136 Corchorus olitorius HOM05D006329 ORTHO05D008357 1.2e-92 344.7 264 64.0
CARHR133910 Cardamine hirsuta HOM05D006329 ORTHO05D008357 2.0e-92 344.0 263 64.3
Atru.chr12.838 Acer truncatum HOM05D003507 ORTHO05D008357 2.6e-92 343.6 260 64.6
SGA_v2.0_scaffold51G18714 Striga asiatica HOM05D006329 ORTHO05D008357 2.6e-92 343.6 255 65.5
FAN10G3782 Fragaria x ananassa HOM05D006329 ORTHO05D008357 4.5e-92 342.8 263 62.7
Ciclev10031516m.g Citrus clementina HOM05D006329 ORTHO05D008357 5.9e-92 342.4 267 62.5
FAN03G2323 Fragaria x ananassa HOM05D003507 ORTHO05D004324 5.9e-92 342.4 263 62.4
FAN06G3910 Fragaria x ananassa HOM05D006329 ORTHO05D008357 5.9e-92 342.4 263 62.4
Nn6g35280 Nelumbo nucifera HOM05D006329 ORTHO05D008357 5.9e-92 342.4 263 62.4
RcHm_v2.0_Chr1g0362601 Rosa chinensis HOM05D006329 ORTHO05D008357 5.9e-92 342.4 269 61.0
FvH4_7g18810 Fragaria vesca HOM05D006329 ORTHO05D008357 7.7e-92 342.0 263 62.4
GSVIVG01016221001 Vitis vinifera HOM05D006329 ORTHO05D008357 7.7e-92 342.0 269 61.7
Actinidia34805 Actinidia chinensis HOM05D006329 ORTHO05D008357 1.3e-91 341.3 263 62.4
Carub.0004s2119 Capsella rubella HOM05D006329 ORTHO05D008357 1.3e-91 341.3 271 63.1
AL4G36440 Arabidopsis lyrata HOM05D006329 ORTHO05D008357 1.7e-91 340.9 270 62.6
Eucgr.G02867 Eucalyptus grandis HOM05D006329 ORTHO05D008357 1.7e-91 340.9 265 61.9
Rhsim09G0148200 Rhododendron simsii HOM05D000461 ORTHO05D001829 2.2e-91 340.5 271 62.0
Potri.008G035500 Populus trichocarpa HOM05D006329 ORTHO05D008357 3.8e-91 339.7 263 62.4
AT2G39140 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 5.0e-91 339.3 270 62.2
Manes.05G201000 Manihot esculenta HOM05D006329 ORTHO05D008357 8.5e-91 338.6 264 62.5
BcaB02g09141 Brassica carinata HOM05D006329 ORTHO05D008357 1.4e-90 337.8 263 62.7
Duzib114G0755 Durio zibethinus HOM05D006329 ORTHO05D008357 1.4e-90 337.8 264 61.0
Thhalv10016747m.g Eutrema salsugineum HOM05D006329 ORTHO05D008357 1.4e-90 337.8 272 61.8
Thecc.10G083200 Theobroma cacao HOM05D006329 ORTHO05D008357 1.4e-90 337.8 264 62.1
ATR0219G015 Amborella trichopoda HOM05D006329 ORTHO05D008357 1.9e-90 337.4 253 62.5
Prupe.2G208900 Prunus persica HOM05D006329 ORTHO05D008357 2.5e-90 337.0 270 60.4
Aqoxy1G01144 Aquilegia oxysepala HOM05D006329 ORTHO05D008357 4.2e-90 336.3 263 61.6
Sabra08G0023700 Salix brachista HOM05D006329 ORTHO05D008357 4.2e-90 336.3 263 62.0
CsaV3_6G036680 Cucumis sativus L. HOM05D006329 ORTHO05D008357 5.5e-90 335.9 267 60.3
MD07G1170000 Malus domestica HOM05D006329 ORTHO05D008357 7.2e-90 335.5 269 60.6
Sp4g21490 Schrenkiella parvula HOM05D006329 ORTHO05D008357 7.2e-90 335.5 263 62.4
PSO339G5012 Papaver somniferum HOM05D006329 ORTHO05D008357 9.4e-90 335.1 263 60.8
Glyma.10G207800 Glycine max HOM05D006329 ORTHO05D008357 1.2e-89 334.7 267 61.0
MELO3C019822.2 Cucumis melo HOM05D006329 ORTHO05D008357 1.6e-89 334.3 267 60.3
FAN10G0068 Fragaria x ananassa HOM05D006329 ORTHO05D008357 2.7e-89 333.6 263 61.2
PSO063G6532 Papaver somniferum HOM05D006329 ORTHO05D008357 2.7e-89 333.6 263 60.5
Sed0004104 Sechium edule HOM05D006329 ORTHO05D008357 3.6e-89 333.2 264 60.6
Ca_10544_v3 Cicer arietinum L. HOM05D006329 ORTHO05D008357 4.7e-89 332.8 266 60.9
CANSAT56G2601 Cannabis sativa HOM05D006329 ORTHO05D008357 1.0e-88 331.6 268 59.3
CiPaw.01G268700 Carya illinoinensis HOM05D006329 ORTHO05D008357 1.0e-88 331.6 266 60.5
ClCG08G007690 Citrullus lanatus HOM05D006329 ORTHO05D008357 1.4e-88 331.3 257 62.3
TPR.G10288 Trifolium pratense HOM05D006329 ORTHO05D008357 1.4e-88 331.3 264 61.7
TAR623G1379 Trochodendron aralioides HOM05D006329 ORTHO05D008357 1.8e-88 330.9 263 60.5
Cfa001679 Carpinus fangiana HOM05D006329 ORTHO05D008357 2.3e-88 330.5 254 61.8
Haze_16856 Corylus avellana HOM05D006329 ORTHO05D008357 2.3e-88 330.5 276 59.1
Lj5g0015116 Lotus japonicus HOM05D006329 ORTHO05D008357 2.3e-88 330.5 263 60.8
Phvul.007G098900 Phaseolus vulgaris HOM05D006329 ORTHO05D008357 2.3e-88 330.5 267 59.9
QL08p054507 Quercus lobata HOM05D006329 ORTHO05D008357 2.3e-88 330.5 261 61.3
CAN.G321.64 Capsicum annuum HOM05D006329 ORTHO05D008357 3.0e-88 330.1 265 60.0
Oeu013841.1 Olea europaea HOM05D006329 ORTHO05D008357 5.2e-88 329.3 251 62.9
Hma1.2p1_2894F.1_g329960 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 6.7e-88 328.9 263 61.6
Psat6g180040 Pisum sativum HOM05D006329 ORTHO05D008357 1.1e-87 328.2 264 60.2
PGR142G3823 Punica granatum HOM05D006329 ORTHO05D008357 1.5e-87 327.8 263 61.2
EL10Ac4g09587 Beta vulgaris HOM05D006329 ORTHO05D008357 2.6e-87 327.0 294 57.1
QL08p054383 Quercus lobata HOM05D006329 ORTHO05D008357 3.3e-87 326.6 261 60.9
HPP92_027741 Vanilla planifolia HOM05D006329 ORTHO05D008357 3.3e-87 326.6 265 61.1
SMO329G0071 Selaginella moellendorffii HOM05D006329 ORTHO05D008357 4.4e-87 326.2 250 63.6
Medtr1g094190 Medicago truncatula HOM05D006329 ORTHO05D008357 9.7e-87 325.1 270 59.3
BraA05t19681Z Brassica rapa HOM05D006329 ORTHO05D008357 4.8e-86 322.8 252 63.1
A05p07160 Brassica napus HOM05D006329 ORTHO05D008357 6.3e-86 322.4 252 63.1
BcaC02g12042 Brassica carinata HOM05D006329 ORTHO05D008357 1.4e-85 321.2 252 62.7
C04p08570 Brassica napus HOM05D006329 ORTHO05D008357 1.4e-85 321.2 252 62.7
BolC4t22452H Brassica oleracea HOM05D006329 ORTHO05D008357 1.4e-85 321.2 252 62.7
arahy.Tifrunner.gnm1.ann1.KFTR8M Arachis hypogaea HOM05D006329 ORTHO05D008357 1.8e-85 320.9 271 59.8
HPP92_026018 Vanilla planifolia HOM05D006329 ORTHO05D008357 2.0e-84 317.4 265 60.4
Lalb_Chr21g0313671 Lupinus albus HOM05D006329 ORTHO05D008357 3.5e-84 316.6 270 56.3
ECA238G1295 Erigeron canadensis HOM05D006329 ORTHO05D001676 7.7e-84 315.5 246 61.8
FAN06G0494 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.3e-83 314.7 271 58.3
Cpa.g.sc53.128 Carica papaya HOM05D006329 ORTHO05D008357 4.2e-82 309.7 238 62.2
AUR62002759 Chenopodium quinoa HOM05D006329 ORTHO05D008357 4.2e-82 309.7 236 64.8
Peaxi162Scf00145g01311 Petunia axillaris HOM05D006329 ORTHO05D008357 4.2e-82 309.7 236 62.3
Os03g0152700 Oryza sativa ssp. japonica HOM05D006329 ORTHO05D008357 3.6e-81 306.6 237 62.9
DCAR_005490 Daucus carota HOM05D006329 ORTHO05D008357 4.0e-80 303.1 234 63.2
RhsimUnG0185600 Rhododendron simsii HOM05D000461 ORTHO05D001829 3.3e-79 300.1 235 62.1
arahy.Tifrunner.gnm1.ann1.21BGD2 Arachis hypogaea HOM05D006329 ORTHO05D008357 6.3e-78 295.8 273 55.7
vmacro04842 Vaccinium macrocarpon HOM05D006329 ORTHO05D008357 1.1e-77 295.0 238 60.1
Hund20700 Selenicereus undatus HOM05D006329 ORTHO05D008357 7.7e-76 288.9 337 48.4
VMungo0251G3605 Vigna mungo HOM05D006329 ORTHO05D008357 1.3e-75 288.1 267 54.7
Dinv31231 Davidia involucrata HOM05D006329 ORTHO05D008357 2.6e-71 273.9 193 66.3
Lalb_Chr21g0313541 Lupinus albus HOM05D006329 ORTHO05D008357 2.3e-67 260.8 210 58.1
Lj3A938T44 Lonicera japonica HOM05D006329 ORTHO05D008357 5.0e-67 259.6 253 55.3
CSS0005771 Camellia sinensis var. sinensis HOM05D006329 ORTHO05D008357 1.5e-66 258.1 267 50.6
Sc09g0006060 Simmondsia chinensis HOM05D006329 ORTHO05D008357 2.2e-62 244.2 165 69.1
Cfa001678 Carpinus fangiana HOM05D006329 ORTHO05D008357 2.7e-60 237.3 163 68.7
FAN01G2166 Fragaria x ananassa HOM05D006329 ORTHO05D008357 2.7e-60 237.3 161 70.2
Aa31LG5G20460 Aethionema arabicum HOM05D006329 ORTHO05D008357 5.4e-53 213.0 241 49.0
MCO14G528 Micromonas commoda HOM05D006329 ORTHO05D008357 7.0e-53 212.6 255 46.7
CBR_g29624 Chara braunii HOM05D006329 ORTHO05D008357 2.0e-52 211.1 162 63.0
HPP92_026744 Vanilla planifolia HOM05D006329 ORTHO05D008357 1.7e-51 208.0 239 48.5
Cre02.g095121 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 1.8e-48 198.0 328 38.1
PRCOL_00004574 Prasinoderma coloniale HOM05D006329 ORTHO05D008357 8.9e-48 195.7 249 46.2
AUR62014125 Chenopodium quinoa HOM05D006329 ORTHO05D008357 1.7e-38 164.9 115 70.4
CAN.G176.13 Capsicum annuum HOM05D006329 ORTHO05D033978 5.2e-24 116.7 83 61.4
Pp3s196_90 Physcomitrium patens HOM05D006329 ORTHO05D008357 2.0e-23 114.8 244 29.9
Cre07.g323550 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 7.6e-15 86.3 263 28.1
Hma1.2p1_2894F.1_g329970 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 1.3e-14 85.5 75 57.3
MCO04G216 Micromonas commoda HOM05D006329 ORTHO05D008357 1.3e-14 85.5 234 30.3
AT3G43340 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 6.4e-14 83.2 73 58.9
MCO01G641 Micromonas commoda HOM05D006329 ORTHO05D008357 1.1e-10 72.4 233 27.0
Hma1.2p1_2894F.1_g329973 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 2.8e-09 67.8 54 63.0


User provided reference genes

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