Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G142100 Manihot esculenta HOM05D002849 ORTHO05D007186 6.3e-210 733.8 358 100.0
Prupe.1G356900 Prunus persica HOM05D002849 ORTHO05D007186 3.1e-196 688.3 358 92.5
Thecc.08G055100 Theobroma cacao HOM05D002849 ORTHO05D007186 4.9e-194 681.0 354 92.9
Duzib093G2127 Durio zibethinus HOM05D002849 ORTHO05D007186 1.2e-192 676.4 354 91.8
Potri.005G083500 Populus trichocarpa HOM05D002849 ORTHO05D007186 6.0e-192 674.1 349 93.4
FvH4_2g37771 Fragaria vesca HOM05D002849 ORTHO05D007186 1.3e-191 672.9 358 91.1
Gohir.A05G181300 Gossypium hirsutum HOM05D002849 ORTHO05D007186 3.0e-191 671.8 354 91.2
CiPaw.08G071100 Carya illinoinensis HOM05D002849 ORTHO05D007186 8.6e-191 670.2 359 90.8
Gohir.D05G184300 Gossypium hirsutum HOM05D002849 ORTHO05D007186 8.6e-191 670.2 354 91.0
Gorai.009G189800 Gossypium raimondii HOM05D002849 ORTHO05D007186 8.6e-191 670.2 354 91.0
Atru.chr13.175_Atru.chr13.176 Acer truncatum HOM05D002849 ORTHO05D007186 9.5e-190 666.8 361 90.0
TWI56G0831 Tripterygium wilfordii HOM05D002849 ORTHO05D007186 9.5e-190 666.8 354 90.7
CANSAT11G2551 Cannabis sativa HOM05D002849 ORTHO05D007186 2.8e-189 665.2 358 89.1
Dinv39573 Davidia involucrata HOM05D002849 ORTHO05D007186 3.6e-189 664.8 360 90.3
CSS0035799 Camellia sinensis var. sinensis HOM05D002849 ORTHO05D007186 4.0e-188 661.4 358 89.4
MD08G1004800 Malus domestica HOM05D002849 ORTHO05D007186 2.0e-187 659.1 358 89.4
Ciclev10001644m.g Citrus clementina HOM05D002849 ORTHO05D007186 4.4e-187 657.9 356 88.8
PGR083G0750 Punica granatum HOM05D002849 ORTHO05D007186 2.9e-186 655.2 360 89.2
Sc02g0008960 Simmondsia chinensis HOM05D002849 ORTHO05D007186 4.9e-186 654.4 358 88.5
MELO3C011328.2 Cucumis melo HOM05D002849 ORTHO05D007186 9.2e-185 650.2 358 87.4
Eucgr.F03540 Eucalyptus grandis HOM05D002849 ORTHO05D007186 3.5e-184 648.3 353 89.0
AL2G36230 Arabidopsis lyrata HOM05D002849 ORTHO05D007186 4.6e-184 647.9 357 88.5
Cc10_g00890 Coffea canephora HOM05D002849 ORTHO05D007186 6.0e-184 647.5 356 88.2
Migut.N03194 Erythranthe guttata HOM05D002849 ORTHO05D007186 7.8e-184 647.1 356 87.1
Nn6g31840 Nelumbo nucifera HOM05D002849 ORTHO05D007186 7.8e-184 647.1 353 88.7
Carub.0004s2686 Capsella rubella HOM05D002849 ORTHO05D007186 1.3e-183 646.4 355 87.9
Aqoxy6G01855 Aquilegia oxysepala HOM05D002849 ORTHO05D007186 2.3e-183 645.6 356 87.9
Sp4g26340 Schrenkiella parvula HOM05D002849 ORTHO05D007186 2.3e-183 645.6 357 86.8
Hund05132 Selenicereus undatus HOM05D002849 ORTHO05D007186 2.3e-183 645.6 358 86.6
Sed0011348 Sechium edule HOM05D002849 ORTHO05D007186 3.0e-183 645.2 359 86.9
THA.LOC104811452 Tarenaya hassleriana HOM05D002849 ORTHO05D007186 3.9e-183 644.8 357 87.1
Carub.0002s2306 Capsella rubella HOM05D002849 ORTHO05D007186 6.6e-183 644.0 359 86.6
GSVIVG01008705001 Vitis vinifera HOM05D002849 ORTHO05D007186 8.6e-183 643.7 368 85.6
PSO541G1452 Papaver somniferum HOM05D002849 ORTHO05D007186 7.3e-182 640.6 357 86.3
AT2G44270 Arabidopsis thaliana HOM05D002849 ORTHO05D007186 9.5e-182 640.2 355 87.6
Thhalv10018770m.g Eutrema salsugineum HOM05D002849 ORTHO05D007186 9.5e-182 640.2 358 86.6
AL4G43230 Arabidopsis lyrata HOM05D002849 ORTHO05D007186 1.2e-181 639.8 355 87.3
CARHR069720 Cardamine hirsuta HOM05D002849 ORTHO05D007186 1.6e-181 639.4 357 87.1
TAR376G0763 Trochodendron aralioides HOM05D002849 ORTHO05D007186 2.8e-181 638.6 357 86.6
PSO675G6932 Papaver somniferum HOM05D002849 ORTHO05D007186 8.1e-181 637.1 357 85.4
ClCG08G013910 Citrullus lanatus HOM05D002849 ORTHO05D007186 2.0e-179 632.5 359 86.1
vmacro21838 Vaccinium macrocarpon HOM05D002849 ORTHO05D007186 7.6e-179 630.6 414 76.6
FAN27G2060 Fragaria x ananassa HOM05D002849 ORTHO05D007186 9.9e-179 630.2 358 86.3
FAN20G1564 Fragaria x ananassa HOM05D002849 ORTHO05D007186 2.2e-178 629.0 358 86.0
QL02p013578 Quercus lobata HOM05D002849 ORTHO05D007186 6.4e-178 627.5 387 81.1
Aa31LG1G25890 Aethionema arabicum HOM05D002849 ORTHO05D007186 8.4e-178 627.1 357 85.4
A05p04470 Brassica napus HOM05D002849 ORTHO05D007186 1.9e-177 625.9 371 82.2
Rhsim06G0009600 Rhododendron simsii HOM05D002849 ORTHO05D007186 1.9e-177 625.9 406 78.1
BraA05t19423Z Brassica rapa HOM05D002849 ORTHO05D007186 2.7e-176 622.1 381 80.1
Glyma.04G002200 Glycine max HOM05D002849 ORTHO05D007186 1.0e-175 620.2 352 85.5
Ca_15284_v3 Cicer arietinum L. HOM05D002849 ORTHO05D007186 2.3e-175 619.0 351 84.6
Ca_15420_v3 Cicer arietinum L. HOM05D002849 ORTHO05D007186 2.3e-175 619.0 351 84.6
Cfa017767 Carpinus fangiana HOM05D002849 ORTHO05D007186 5.1e-175 617.8 330 91.5
C04p05180 Brassica napus HOM05D002849 ORTHO05D007186 6.6e-175 617.5 364 82.7
Lsat_1_v5_gn_3_7661 Lactuca sativa HOM05D002849 ORTHO05D007186 1.1e-174 616.7 348 86.8
Medtr3g118250 Medicago truncatula HOM05D002849 ORTHO05D007186 4.3e-174 614.8 348 85.6
BolC4t22158H Brassica oleracea HOM05D002849 ORTHO05D007186 2.8e-173 612.1 393 77.9
Oeu046334.1 Olea europaea HOM05D002849 ORTHO05D007186 2.8e-173 612.1 335 88.1
ECA246G5259 Erigeron canadensis HOM05D002849 ORTHO05D007186 8.1e-173 610.5 321 90.0
Lj1g0000302 Lotus japonicus HOM05D002849 ORTHO05D007186 1.8e-172 609.4 358 84.1
BraA07t31703Z Brassica rapa HOM05D002849 ORTHO05D007186 3.4e-171 605.1 377 79.8
Os02g0762300 Oryza sativa ssp. japonica HOM05D002849 ORTHO05D007186 2.2e-170 602.4 364 81.9
BcaB02g08806 Brassica carinata HOM05D002849 ORTHO05D007186 1.4e-169 599.7 359 82.5
Haze_22739 Corylus avellana HOM05D002849 ORTHO05D007186 1.9e-169 599.4 374 81.6
Zm00001eb255730 Zea mays HOM05D002849 ORTHO05D007186 1.9e-169 599.4 366 81.4
BcaNung06602 Brassica carinata HOM05D002849 ORTHO05D007186 4.2e-169 598.2 359 81.6
Phvul.009G117600 Phaseolus vulgaris HOM05D002849 ORTHO05D007186 7.1e-169 597.4 356 80.3
MBI08_g35553_MAGBIO Magnolia biondii HOM05D002849 ORTHO05D007186 2.7e-168 595.5 362 81.5
Hma1.2p1_1100F.1_g257100 Hydrangea macrophylla HOM05D002849 ORTHO05D007186 6.0e-168 594.3 356 82.0
HPP92_024207 Vanilla planifolia HOM05D002849 ORTHO05D007186 6.0e-168 594.3 362 81.8
CsaV3_2G024550 Cucumis sativus L. HOM05D000201 ORTHO05D000490 6.6e-167 590.9 371 79.8
Lj4A14T52 Lonicera japonica HOM05D002849 ORTHO05D007186 1.1e-166 590.1 413 72.9
Nitab4.5_0001131g0060 Nicotiana tabacum HOM05D002849 ORTHO05D007186 3.6e-165 585.1 366 79.5
arahy.Tifrunner.gnm1.ann1.ID8SUW Arachis hypogaea HOM05D002849 ORTHO05D007186 1.8e-164 582.8 349 82.5
C06p50120 Brassica napus HOM05D002849 ORTHO05D007186 3.8e-162 575.1 356 80.6
Os01g0598900 Oryza sativa ssp. japonica HOM05D002849 ORTHO05D007186 1.1e-161 573.5 326 85.6
unitig_744.g24607 Utricularia gibba HOM05D002849 ORTHO05D007186 2.1e-160 569.3 357 79.8
A07p41740 Brassica napus HOM05D002849 ORTHO05D007186 5.1e-159 564.7 311 87.1
SGA_v2.0_scaffold19G08599 Striga asiatica HOM05D002849 ORTHO05D007186 3.3e-158 562.0 443 65.9
BcaC08g47111 Brassica carinata HOM05D002849 ORTHO05D007186 1.1e-156 557.0 369 75.6
DCAR_016752 Daucus carota HOM05D002022 ORTHO05D002056 6.9e-156 554.3 320 84.4
Cfa014032 Carpinus fangiana HOM05D002849 ORTHO05D007186 7.6e-155 550.8 329 83.9
Mapoly0148s0040 Marchantia polymorpha HOM05D002849 ORTHO05D007186 8.4e-154 547.4 322 79.8
Sp5g31310 Schrenkiella parvula HOM05D002849 ORTHO05D007186 8.4e-154 547.4 358 77.4
COL.COLO4_21615 Corchorus olitorius HOM05D002849 ORTHO05D007186 1.1e-153 547.0 354 78.8
SMO118G0346 Selaginella moellendorffii HOM05D002849 ORTHO05D007186 4.2e-153 545.0 337 75.4
Lalb_Chr23g0264921 Lupinus albus HOM05D002849 ORTHO05D007186 6.0e-152 541.2 387 71.6
MD15G1004300 Malus domestica HOM05D002849 ORTHO05D007186 5.1e-151 538.1 371 74.1
Pp3c27_3320 Physcomitrium patens HOM05D002849 ORTHO05D007186 6.7e-151 537.7 316 80.1
EL10Ac2g04301 Beta vulgaris HOM05D002849 ORTHO05D007186 3.4e-147 525.4 354 75.1
VMungo1309G1771 Vigna mungo HOM05D002849 ORTHO05D007186 5.5e-145 518.1 356 72.5
BolC6t40052H Brassica oleracea HOM05D002849 ORTHO05D007186 3.5e-144 515.4 359 73.3
arahy.Tifrunner.gnm1.ann1.D80FKX Arachis hypogaea HOM05D002849 ORTHO05D007186 2.2e-141 506.1 349 73.9
BcaC08g47284 Brassica carinata HOM05D002849 ORTHO05D007186 2.8e-141 505.8 360 72.2
CBR_g55299 Chara braunii HOM05D002849 ORTHO05D007186 2.4e-140 502.7 319 72.4
Cre16.g666100 Chlamydomonas reinhardtii HOM05D002849 ORTHO05D007186 3.6e-136 488.8 305 74.1
AUR62013834 Chenopodium quinoa HOM05D002849 ORTHO05D007186 9.1e-132 474.2 358 68.2
TPR.G36468 Trifolium pratense HOM05D002849 ORTHO05D007186 3.4e-131 472.2 293 79.2
AagrBONN_evm.TU.Sc2ySwM_344.4630 Anthoceros agrestis HOM05D002849 ORTHO05D007186 4.7e-128 461.8 259 84.2
Haze_27194 Corylus avellana HOM05D002849 ORTHO05D007186 5.9e-123 444.9 327 63.9
AT1G76170 Arabidopsis thaliana HOM05D002849 ORTHO05D007186 1.3e-122 443.7 238 89.1
SHI05854 Sapria himalayana HOM05D002849 ORTHO05D007186 1.3e-122 443.7 339 67.6
Cpa.g.sc26.233 Carica papaya HOM05D002849 ORTHO05D007186 1.1e-121 440.7 349 67.3
RcHm_v2.0_Chr6g0303961 Rosa chinensis HOM05D002849 ORTHO05D007186 1.2e-120 437.2 231 90.9
PRCOL_00001104 Prasinoderma coloniale HOM05D002849 ORTHO05D007186 8.8e-119 431.0 345 62.3
AUR62036771 Chenopodium quinoa HOM05D002849 ORTHO05D007186 3.3e-118 429.1 321 68.8
HanXRQChr17g0533361 Helianthus annuus HOM05D002849 ORTHO05D007186 3.5e-115 419.1 221 90.5
Solyc08g074590.2 Solanum lycopersicum HOM05D002849 ORTHO05D007186 3.8e-114 415.6 226 87.6
Sopen08g023190 Solanum pennellii HOM05D002849 ORTHO05D007186 3.8e-114 415.6 226 87.6
HPP92_024246 Vanilla planifolia HOM05D002849 ORTHO05D007186 5.5e-113 411.8 239 83.3
Nitab4.5_0000907g0040 Nicotiana tabacum HOM05D002849 ORTHO05D007186 1.6e-112 410.2 351 63.5
CARHR139450 Cardamine hirsuta HOM05D002849 ORTHO05D007186 2.7e-112 409.5 214 91.6
ATR0661G072 Amborella trichopoda HOM05D002849 ORTHO05D007186 4.7e-112 408.7 227 87.2
Peaxi162Scf00166g00641 Petunia axillaris HOM05D002849 ORTHO05D007186 1.0e-106 391.0 222 85.1
TAR628G0269 Trochodendron aralioides HOM05D002849 ORTHO05D007186 1.4e-103 380.6 230 82.2
Cfa027047 Carpinus fangiana HOM05D002849 ORTHO05D007186 2.0e-99 366.7 426 47.9
Ah.01g004180 Amaranthus hybridus HOM05D002849 ORTHO05D007186 1.5e-81 307.4 223 70.4
Psat5g001160 Pisum sativum HOM05D002849 ORTHO05D007186 2.6e-70 270.0 202 68.8
Lj9A176T24 Lonicera japonica HOM05D002849 ORTHO05D007186 2.5e-65 253.4 211 63.5
Peaxi162Scf00445g00105 Petunia axillaris HOM05D002849 ORTHO05D007186 2.9e-61 240.0 350 42.9
VMungo1309G1925 Vigna mungo HOM05D002849 ORTHO05D007186 1.7e-58 230.7 269 50.9
CARHR139440 Cardamine hirsuta HOM05D002849 ORTHO05D007186 1.2e-56 224.6 129 82.9
Peaxi162Scf00166g00633 Petunia axillaris HOM05D002849 ORTHO05D007186 1.0e-50 204.9 114 84.2
HanXRQChr17g0533371 Helianthus annuus HOM05D002849 ORTHO05D007186 2.5e-49 200.3 117 80.3
ATR0661G077 Amborella trichopoda HOM05D002849 ORTHO05D007186 1.1e-44 184.9 123 71.5
SalBow6G3808 Salvia bowleyana HOM05D002849 ORTHO05D007186 5.6e-41 172.6 101 80.2
RcHm_v2.0_Chr6g0303951 Rosa chinensis HOM05D002849 ORTHO05D007186 7.4e-41 172.2 94 84.0
Prupe.3G237200 Prunus persica HOM05D002849 ORTHO05D007186 1.1e-36 158.3 83 90.4
SpUn0523_0010 Schrenkiella parvula HOM05D002849 ORTHO05D007186 8.7e-34 148.7 120 65.0
FAN08G3136 Fragaria x ananassa HOM05D002849 ORTHO05D007186 1.1e-28 131.7 77 88.3
MELO3C004787.2 Cucumis melo HOM05D002849 ORTHO05D007186 6.0e-27 125.9 95 67.4
Gorai.007G371200 Gossypium raimondii HOM05D002849 ORTHO05D047384 6.3e-24 115.9 69 76.8
MELO3C012882.2 Cucumis melo HOM05D002849 ORTHO05D007186 3.1e-23 113.6 77 71.4
Gohir.D11G341150 Gossypium hirsutum HOM05D002849 ORTHO05D047384 3.4e-22 110.2 74 71.6
MELO3C034170.2 Cucumis melo HOM05D002849 ORTHO05D007186 1.5e-17 94.7 57 75.4
MELO3C003855.2 Cucumis melo HOM05D002849 ORTHO05D007186 4.8e-16 89.7 60 71.7
BolC5t33314H Brassica oleracea HOM05D002849 ORTHO05D024297 5.0e-13 79.7 77 55.8
C05p45940 Brassica napus HOM05D002849 ORTHO05D024297 2.5e-12 77.4 93 49.5
TAR276G0001 Trochodendron aralioides HOM05D002849 ORTHO05D051491 3.2e-12 77.0 54 70.4
AL7G13010 Arabidopsis lyrata HOM05D002849 ORTHO05D007186 1.5e-09 68.2 34 82.4
Actinidia17029 Actinidia chinensis HOM05D000148 ORTHO05D000081 2.0e-09 67.8 31 93.5
BcaB01g01492 Brassica carinata HOM05D002849 ORTHO05D027174 3.7e-08 63.5 44 68.2
A05p30360 Brassica napus HOM05D002849 ORTHO05D024297 1.1e-07 62.0 38 76.3
BraA05t21874Z Brassica rapa HOM05D002849 ORTHO05D024297 1.1e-07 62.0 38 76.3
PRCOL_00007051 Prasinoderma coloniale HOM05D002604 ORTHO05D003070 7.0e-07 59.3 225 24.0


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