Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G068800 Manihot esculenta HOM05D003686 ORTHO05D004322 2.8e-93 345.5 206 100.0
Manes.01G213100 Manihot esculenta HOM05D003686 ORTHO05D004322 1.4e-76 290.0 210 75.7
Eucgr.A00286 Eucalyptus grandis HOM05D003686 ORTHO05D004322 1.7e-66 256.5 208 67.8
QL04p005272 Quercus lobata HOM05D003686 ORTHO05D004322 2.5e-65 252.7 207 64.7
QL07p015848 Quercus lobata HOM05D003686 ORTHO05D004322 2.1e-64 249.6 207 64.7
Ciclev10022350m.g Citrus clementina HOM05D003686 ORTHO05D004322 1.0e-63 247.3 208 77.9
Potri.003G058400 Populus trichocarpa HOM05D003686 ORTHO05D004322 1.0e-63 247.3 209 68.9
COL.COLO4_08036 Corchorus olitorius HOM05D003686 ORTHO05D004322 7.4e-62 241.1 209 69.9
Eucgr.B02749 Eucalyptus grandis HOM05D003686 ORTHO05D004322 7.4e-62 241.1 208 76.0
Gorai.007G132200 Gossypium raimondii HOM05D003686 ORTHO05D004322 2.2e-61 239.6 209 75.1
Haze_04804 Corylus avellana HOM05D003686 ORTHO05D004322 3.7e-61 238.8 208 62.5
Gorai.004G053600 Gossypium raimondii HOM05D003686 ORTHO05D004322 3.7e-61 238.8 207 63.8
Gohir.A11G118400 Gossypium hirsutum HOM05D003686 ORTHO05D004322 6.3e-61 238.0 209 74.2
TWI14G0352 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 8.2e-61 237.7 207 67.1
CiPaw.07G099200 Carya illinoinensis HOM05D003686 ORTHO05D004322 1.4e-60 236.9 208 67.8
QL93p0358_0011 Quercus lobata HOM05D003686 ORTHO05D004322 1.8e-60 236.5 207 63.3
TAR636G2878 Trochodendron aralioides HOM05D003686 ORTHO05D004322 1.2e-59 233.8 207 62.8
TAR362G1277 Trochodendron aralioides HOM05D003686 ORTHO05D004322 1.5e-59 233.4 200 65.0
TWI23G0547 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 5.9e-59 231.5 207 72.0
Gohir.D11G123300 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.3e-58 230.3 214 62.6
Gohir.A08G043900 Gossypium hirsutum HOM05D003686 ORTHO05D004322 2.2e-58 229.6 207 61.4
Glyma.10G021900 Glycine max HOM05D003686 ORTHO05D004322 5.0e-58 228.4 209 63.2
Gohir.D08G053600 Gossypium hirsutum HOM05D003686 ORTHO05D004322 6.5e-58 228.0 207 62.3
Nn1g08910 Nelumbo nucifera HOM05D003686 ORTHO05D004322 6.5e-58 228.0 192 65.6
Cpa.g.sc9.157 Carica papaya HOM05D003686 ORTHO05D004322 8.5e-58 227.6 209 67.9
TAR365G0683 Trochodendron aralioides HOM05D003686 ORTHO05D004322 8.5e-58 227.6 207 60.9
Atru.chr5.1287 Acer truncatum HOM05D003686 ORTHO05D004322 1.1e-57 227.3 209 66.5
Rhsim13G0017700 Rhododendron simsii HOM05D003686 ORTHO05D004322 1.9e-57 226.5 224 58.5
CsaV3_7G028310 Cucumis sativus L. HOM05D003686 ORTHO05D004322 2.5e-57 226.1 208 70.7
Sed0010038 Sechium edule HOM05D003686 ORTHO05D004322 3.2e-57 225.7 207 68.1
Actinidia00703 Actinidia chinensis HOM05D003686 ORTHO05D004322 4.2e-57 225.3 208 68.3
Phvul.007G166600 Phaseolus vulgaris HOM05D003686 ORTHO05D004322 3.0e-55 219.2 209 70.3
CANSAT78G2257 Cannabis sativa HOM05D003686 ORTHO05D004322 5.2e-55 218.4 220 64.5
MELO3C015891.2 Cucumis melo HOM05D003686 ORTHO05D004322 5.2e-55 218.4 208 69.2
Duzib133G0241 Durio zibethinus HOM05D003686 ORTHO05D004322 6.7e-55 218.0 209 61.2
Glyma.02G152300 Glycine max HOM05D003686 ORTHO05D004322 6.7e-55 218.0 218 64.7
GSVIVG01011011001 Vitis vinifera HOM05D003686 ORTHO05D004322 8.8e-55 217.6 129 82.9
ClCG09G006530 Citrullus lanatus HOM05D003686 ORTHO05D004322 1.1e-54 217.2 207 68.1
VMungo0720G0802 Vigna mungo HOM05D003686 ORTHO05D004322 2.0e-54 216.5 216 62.5
Lalb_Chr02g0143061 Lupinus albus HOM05D003686 ORTHO05D004322 2.2e-53 213.0 209 61.7
Lalb_Chr06g0163281 Lupinus albus HOM05D003686 ORTHO05D004322 2.2e-53 213.0 210 61.9
Aqoxy2G03146 Aquilegia oxysepala HOM05D003686 ORTHO05D004322 3.1e-52 209.1 198 60.1
FAN20G0133 Fragaria x ananassa HOM05D003686 ORTHO05D004322 2.0e-51 206.5 209 63.6
FAN27G0391 Fragaria x ananassa HOM05D003686 ORTHO05D004322 2.0e-51 206.5 209 63.6
RcHm_v2.0_Chr6g0292481 Rosa chinensis HOM05D003686 ORTHO05D004322 2.0e-51 206.5 211 59.2
Sabra03G0032800 Salix brachista HOM05D003686 ORTHO05D004322 3.5e-51 205.7 192 65.1
Cfa010467 Carpinus fangiana HOM05D003686 ORTHO05D004322 1.3e-50 203.8 124 79.0
arahy.Tifrunner.gnm1.ann1.MV1AMG Arachis hypogaea HOM05D003686 ORTHO05D004322 2.2e-50 203.0 209 67.0
Duzib138G0197 Durio zibethinus HOM05D003686 ORTHO05D004322 5.0e-50 201.8 208 65.4
FAN15G3346 Fragaria x ananassa HOM05D003686 ORTHO05D004322 8.5e-50 201.1 212 62.7
vmacro17192 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 1.5e-49 200.3 207 56.5
FvH4_2g24650 Fragaria vesca HOM05D003686 ORTHO05D004322 2.5e-49 199.5 209 62.7
MSTRG.21821 Avicennia marina HOM05D003686 ORTHO05D004322 4.2e-49 198.7 132 74.2
Ca_10377_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 4.2e-49 198.7 209 58.9
Ca_29655_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 4.2e-49 198.7 209 58.9
PGR031G1643 Punica granatum HOM05D003686 ORTHO05D004322 1.2e-48 197.2 207 56.0
Lsat_1_v5_gn_5_188760 Lactuca sativa HOM05D003686 ORTHO05D004322 2.1e-48 196.4 214 62.6
Nn2g12370 Nelumbo nucifera HOM05D003686 ORTHO05D004322 3.6e-48 195.7 187 60.4
Prupe.8G251800 Prunus persica HOM05D003686 ORTHO05D004322 1.0e-47 194.1 121 80.2
TPR.G15798 Trifolium pratense HOM05D003686 ORTHO05D004322 1.0e-47 194.1 212 61.8
ATR0706G002 Amborella trichopoda HOM05D003686 ORTHO05D004322 1.4e-47 193.7 213 55.4
CDE11G0890 Ceratophyllum demersum HOM05D003686 ORTHO05D004322 1.4e-47 193.7 138 73.9
Thecc.10G102800 Theobroma cacao HOM05D003686 ORTHO05D004322 1.8e-47 193.4 209 61.7
Dinv11293 Davidia involucrata HOM05D003686 ORTHO05D004322 1.2e-46 190.7 205 56.6
DCAR_007018 Daucus carota HOM05D003686 ORTHO05D004322 3.3e-46 189.1 210 53.8
Dinv11297 Davidia involucrata HOM05D003686 ORTHO05D004322 3.3e-46 189.1 205 56.1
Lj1g0025208 Lotus japonicus HOM05D003686 ORTHO05D004322 3.3e-46 189.1 211 55.0
CiPaw.08G100800 Carya illinoinensis HOM05D003686 ORTHO05D004322 4.4e-46 188.7 208 61.5
Ca_09109_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 8.2e-45 184.5 176 58.0
DCAR_012430 Daucus carota HOM05D003686 ORTHO05D004322 1.1e-44 184.1 193 55.4
THA.LOC104817532 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 1.1e-44 184.1 138 71.7
THA.LOC104826011 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 1.8e-44 183.3 134 71.6
Hma1.2p1_0643F.1_g194700 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 3.1e-44 182.6 120 75.8
Hma1.2p1_0643F.1_g194711 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 3.1e-44 182.6 120 75.8
Medtr1g088990 Medicago truncatula HOM05D003686 ORTHO05D004322 3.1e-44 182.6 217 67.7
Os02g0266100 Oryza sativa ssp. japonica HOM05D003686 ORTHO05D004322 4.1e-44 182.2 128 75.8
ECA248G2178 Erigeron canadensis HOM05D003686 ORTHO05D004322 7.0e-44 181.4 135 70.4
Solyc01g067830.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 9.1e-44 181.0 132 70.5
Medtr7g107640 Medicago truncatula HOM05D003686 ORTHO05D004322 1.6e-43 180.3 127 72.4
Cc01_g20160 Coffea canephora HOM05D003686 ORTHO05D004322 3.5e-43 179.1 224 52.2
Sed0008045 Sechium edule HOM05D003686 ORTHO05D004322 5.9e-43 178.3 221 57.0
Solyc06g008860.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 5.9e-43 178.3 209 52.2
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 5.9e-43 178.3 235 54.9
Migut.N00130 Erythranthe guttata HOM05D003686 ORTHO05D004322 7.7e-43 177.9 202 51.5
Sopen01g029780 Solanum pennellii HOM05D003686 ORTHO05D004322 7.7e-43 177.9 132 69.7
Sopen06g003610 Solanum pennellii HOM05D003686 ORTHO05D004322 7.7e-43 177.9 209 52.6
Nitab4.5_0000295g0050 Nicotiana tabacum HOM05D003686 ORTHO05D004322 1.3e-42 177.2 207 51.2
A03p30600 Brassica napus HOM05D003686 ORTHO05D004322 2.2e-42 176.4 187 65.8
Lj5g0005016 Lotus japonicus HOM05D003686 ORTHO05D004322 2.2e-42 176.4 233 51.1
Sp6g03160 Schrenkiella parvula HOM05D003686 ORTHO05D004322 2.2e-42 176.4 124 73.4
CARHR251560 Cardamine hirsuta HOM05D003686 ORTHO05D004322 5.0e-42 175.3 132 68.2
arahy.Tifrunner.gnm1.ann1.TAZ1K7 Arachis hypogaea HOM05D003686 ORTHO05D004322 6.5e-42 174.9 239 56.9
CAN.G185.6 Capsicum annuum HOM05D003686 ORTHO05D004322 8.5e-42 174.5 203 55.2
Thhalv10028986m.g Eutrema salsugineum HOM05D003686 ORTHO05D004322 8.5e-42 174.5 204 61.8
Nitab4.5_0004238g0080 Nicotiana tabacum HOM05D003686 ORTHO05D004322 1.1e-41 174.1 207 51.2
C03p37160 Brassica napus HOM05D003686 ORTHO05D004322 1.9e-41 173.3 129 69.8
BcaB05g23688 Brassica carinata HOM05D003686 ORTHO05D004322 5.5e-41 171.8 125 72.0
BcaB05g23689 Brassica carinata HOM05D003686 ORTHO05D004322 5.5e-41 171.8 125 72.0
BraA03t12240Z Brassica rapa HOM05D003686 ORTHO05D004322 7.2e-41 171.4 185 65.4
BcaB01g02510 Brassica carinata HOM05D003686 ORTHO05D004322 1.2e-40 170.6 115 75.7
MD03G1275200 Malus domestica HOM05D003686 ORTHO05D004322 1.6e-40 170.2 204 52.9
BcaB01g01979 Brassica carinata HOM05D003686 ORTHO05D004322 2.1e-40 169.9 115 74.8
PGSC0003DMG400021997 Solanum tuberosum HOM05D003686 ORTHO05D004322 2.1e-40 169.9 209 50.7
BcaC01g06704 Brassica carinata HOM05D003686 ORTHO05D004322 2.7e-40 169.5 115 74.8
HanXRQChr01g0002781 Helianthus annuus HOM05D003686 ORTHO05D004322 4.7e-40 168.7 225 60.4
BolC3t16013H Brassica oleracea HOM05D003686 ORTHO05D004322 6.1e-40 168.3 123 71.5
CAN.G1006.23 Capsicum annuum HOM05D003686 ORTHO05D004322 8.0e-40 167.9 134 65.7
Hma1.2p1_0643F.1_g194695 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 1.0e-39 167.5 111 75.7
Hma1.2p1_0643F.1_g194710 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 1.0e-39 167.5 111 75.7
AT4G03120 Arabidopsis thaliana HOM05D003686 ORTHO05D004322 1.8e-39 166.8 125 71.2
MD11G1297300 Malus domestica HOM05D003686 ORTHO05D004322 2.3e-39 166.4 204 53.9
PSO801G0146 Papaver somniferum HOM05D003686 ORTHO05D004322 2.3e-39 166.4 199 60.3
Psat3g024960 Pisum sativum HOM05D003686 ORTHO05D004322 2.3e-39 166.4 109 74.3
FAN20G1534 Fragaria x ananassa HOM05D003686 ORTHO05D004322 4.0e-39 165.6 192 60.4
BolC9t53184H Brassica oleracea HOM05D003686 ORTHO05D004322 5.2e-39 165.2 113 74.3
ECA247G2101 Erigeron canadensis HOM05D003686 ORTHO05D004322 1.2e-38 164.1 131 67.2
A09p02440 Brassica napus HOM05D003686 ORTHO05D004322 2.0e-38 163.3 113 72.6
BraA09t35891Z Brassica rapa HOM05D003686 ORTHO05D004322 2.0e-38 163.3 113 72.6
Zm00001eb203990 Zea mays HOM05D003686 ORTHO05D004322 2.6e-38 162.9 232 61.2
PGSC0003DMG400022854 Solanum tuberosum HOM05D003686 ORTHO05D004322 3.4e-38 162.5 105 76.2
Lj2P1184T34 Lonicera japonica HOM05D003686 ORTHO05D004322 1.7e-37 160.2 209 50.2
BolC2t10013H Brassica oleracea HOM05D003686 ORTHO05D004322 3.7e-37 159.1 131 66.4
HanXRQChr11g0330151 Helianthus annuus HOM05D003686 ORTHO05D004322 8.3e-37 157.9 210 50.5
Mapoly0103s0046 Marchantia polymorpha HOM05D003686 ORTHO05D004322 8.3e-37 157.9 130 66.2
FAN24G2968 Fragaria x ananassa HOM05D003686 ORTHO05D004322 1.1e-36 157.5 192 56.8
SGA_v2.0_scaffold36G14363 Striga asiatica HOM05D003686 ORTHO05D004322 1.4e-36 157.1 132 63.6
CSS0007511 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 3.1e-36 156.0 106 74.5
CSS0037271 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 3.1e-36 156.0 106 74.5
PSO339G4974 Papaver somniferum HOM05D003686 ORTHO05D004322 3.1e-36 156.0 207 59.4
Peaxi162Scf01364g00015 Petunia axillaris HOM05D003686 ORTHO05D004322 3.1e-36 156.0 114 67.5
unitig_61.g26148 Utricularia gibba HOM05D003686 ORTHO05D004322 3.1e-36 156.0 132 63.6
BcaC03g16209 Brassica carinata HOM05D003686 ORTHO05D004322 4.1e-36 155.6 122 68.0
BraA02t07500Z Brassica rapa HOM05D003686 ORTHO05D004322 9.1e-36 154.5 134 63.4
SGA_v2.0_scaffold172G39059 Striga asiatica HOM05D003686 ORTHO05D004322 1.6e-35 153.7 217 46.5
Carub.0006s3393 Capsella rubella HOM05D003686 ORTHO05D004322 5.9e-35 151.8 88 83.0
HPP92_021461 Vanilla planifolia HOM05D003686 ORTHO05D004322 1.7e-34 150.2 198 52.0
Mapoly0087s0074 Marchantia polymorpha HOM05D003686 ORTHO05D004322 1.1e-33 147.5 130 62.3
Nitab4.5_0001624g0040 Nicotiana tabacum HOM05D003686 ORTHO05D004322 1.1e-33 147.5 134 61.9
COL.COLO4_34092 Corchorus olitorius HOM05D003686 ORTHO05D004322 2.5e-33 146.4 116 69.0
Nitab4.5_0001149g0030 Nicotiana tabacum HOM05D003686 ORTHO05D004322 5.5e-33 145.2 197 49.7
AUR62025901 Chenopodium quinoa HOM05D003686 ORTHO05D004322 1.8e-31 140.2 208 49.5
AUR62025902 Chenopodium quinoa HOM05D003686 ORTHO05D004322 1.8e-31 140.2 208 49.5
Psat6g168000 Pisum sativum HOM05D003686 ORTHO05D004322 1.8e-31 140.2 193 53.9
Sc25g0004660 Simmondsia chinensis HOM05D003686 ORTHO05D004322 1.8e-31 140.2 194 50.5
MSTRG.12592 Avicennia marina HOM05D003686 ORTHO05D004322 2.0e-30 136.7 132 59.8
CSS0048633 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 2.0e-30 136.7 225 49.3
A02p25120 Brassica napus HOM05D003686 ORTHO05D004322 2.6e-30 136.3 199 54.3
SGA_v2.0_scaffold89G27564 Striga asiatica HOM05D003686 ORTHO05D004322 2.6e-30 136.3 159 50.9
Pp3c4_170 Physcomitrium patens HOM05D003686 ORTHO05D004322 3.4e-30 136.0 133 60.2
Pp3c12_26180 Physcomitrium patens HOM05D003686 ORTHO05D004322 1.7e-29 133.7 133 60.2
Ah.12g061550 Amaranthus hybridus HOM05D003686 ORTHO05D004322 2.2e-29 133.3 232 50.0
Migut.N02118 Erythranthe guttata HOM05D003686 ORTHO05D004322 4.9e-29 132.1 122 62.3
Migut.O00643 Erythranthe guttata HOM05D003686 ORTHO05D004322 4.9e-29 132.1 122 62.3
AagrBONN_evm.TU.Sc2ySwM_228.930 Anthoceros agrestis HOM05D003686 ORTHO05D004322 8.3e-29 131.3 116 63.8
Oeu022800.1 Olea europaea HOM05D003686 ORTHO05D004322 1.1e-28 131.0 94 72.3
Oeu022802.1 Olea europaea HOM05D003686 ORTHO05D004322 1.1e-28 131.0 94 72.3
vmacro02511 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 1.1e-28 131.0 190 60.5
C09p02540 Brassica napus HOM05D003686 ORTHO05D004322 3.1e-28 129.4 98 70.4
Peaxi162Scf00936g00218 Petunia axillaris HOM05D003686 ORTHO05D004322 5.4e-28 128.6 167 49.7
AUR62029649 Chenopodium quinoa HOM05D003686 ORTHO05D004322 2.0e-27 126.7 211 49.3
Lj3A810T51 Lonicera japonica HOM05D003686 ORTHO05D004322 1.3e-26 124.0 177 47.5
Duzib211G0369 Durio zibethinus HOM05D003686 ORTHO05D004322 1.7e-26 123.6 81 76.5
SalBow8G5349 Salvia bowleyana HOM05D003686 ORTHO05D004322 2.9e-26 122.9 128 58.6
Peaxi162Scf01067g00002 Petunia axillaris HOM05D003686 ORTHO05D004322 1.1e-25 120.9 100 62.0
SalBow6G6913 Salvia bowleyana HOM05D003686 ORTHO05D004322 1.1e-25 120.9 214 45.8
unitig_22.g6331 Utricularia gibba HOM05D003686 ORTHO05D004322 1.1e-25 120.9 131 54.2
EL10Ac2g03326 Beta vulgaris HOM05D003686 ORTHO05D004322 1.9e-25 120.2 224 42.9
QL07p015856 Quercus lobata HOM05D003686 ORTHO05D004322 1.9e-25 120.2 195 42.6
QL93p0358_0018 Quercus lobata HOM05D003686 ORTHO05D004322 9.5e-25 117.9 195 42.1
Psat3g182400 Pisum sativum HOM05D003686 ORTHO05D004322 1.6e-24 117.1 62 85.5
vmacro14959 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 1.6e-24 117.1 213 42.3
Psat0s3642g0040 Pisum sativum HOM05D000068 ORTHO05D025728 1.0e-23 114.4 62 87.1
HPP92_021468 Vanilla planifolia HOM05D003686 ORTHO05D004322 2.3e-23 113.2 56 94.6
Hund24902 Selenicereus undatus HOM05D003686 ORTHO05D004322 1.5e-22 110.5 110 60.0
vmacro14957 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 6.8e-15 85.1 202 39.6
Cre09.g401300 Chlamydomonas reinhardtii HOM05D003686 ORTHO05D004322 9.8e-14 81.3 41 82.9
Lj5g0025755 Lotus japonicus HOM05D003686 ORTHO05D009933 5.4e-12 75.5 66 63.6
PSO384G1563 Papaver somniferum HOM05D003686 ORTHO05D004322 2.8e-08 63.2 127 40.9
PSO384G1681 Papaver somniferum HOM05D003686 ORTHO05D004322 3.6e-08 62.8 111 43.2
PRCOL_00005459 Prasinoderma coloniale HOM05D003686 ORTHO05D004322 3.6e-08 62.8 41 65.9
PSO384G1636 Papaver somniferum HOM05D000185 ORTHO05D000105 5.2e-07 58.9 199 33.2
PSO384G1591 Papaver somniferum HOM05D000185 ORTHO05D000105 6.8e-07 58.5 199 33.2


User provided reference genes

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