Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI13_g30325_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 7.2e-243 843.6 453 100.0
TAR633G0900 Trochodendron aralioides HOM05D005431 ORTHO05D006762 1.4e-185 653.3 458 76.9
PSO384G4368 Papaver somniferum HOM05D005431 ORTHO05D006762 8.1e-178 627.5 451 75.6
PSO339G6142 Papaver somniferum HOM05D005431 ORTHO05D006762 3.8e-175 618.6 460 72.6
Aqoxy2G02389 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 2.4e-174 615.9 462 71.6
Aqoxy6G02574 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 5.1e-172 608.2 462 71.0
Thecc.05G259000 Theobroma cacao HOM05D005431 ORTHO05D006762 1.2e-168 597.0 456 73.7
QL07p020652 Quercus lobata HOM05D005431 ORTHO05D006762 1.1e-166 590.5 460 72.2
Dinv18088 Davidia involucrata HOM05D005431 ORTHO05D006762 7.9e-165 584.3 455 70.8
Gohir.A11G240400 Gossypium hirsutum HOM05D005431 ORTHO05D006762 7.9e-165 584.3 446 72.9
Manes.08G148100 Manihot esculenta HOM05D005431 ORTHO05D006762 1.1e-163 580.5 460 69.6
GSVIVG01020933001 Vitis vinifera HOM05D005431 ORTHO05D006762 7.4e-163 577.8 457 72.6
Lj1A1139T47 Lonicera japonica HOM05D005431 ORTHO05D006762 2.1e-162 576.2 454 70.0
COL.COLO4_08630 Corchorus olitorius HOM05D005431 ORTHO05D006762 3.1e-161 572.4 454 71.6
CSS0010563 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 9.0e-161 570.9 443 71.8
Gohir.D11G249800 Gossypium hirsutum HOM05D005431 ORTHO05D006762 1.2e-160 570.5 446 72.4
Gorai.007G267600 Gossypium raimondii HOM05D005431 ORTHO05D006762 2.9e-159 565.8 446 72.2
CiPaw.10G000400 Carya illinoinensis HOM05D005431 ORTHO05D006762 4.2e-158 562.0 459 72.8
Glyma.16G042800 Glycine max HOM05D005431 ORTHO05D006762 3.5e-157 558.9 448 68.1
TWI32G0483 Tripterygium wilfordii HOM05D005431 ORTHO05D006762 6.0e-157 558.1 454 68.7
Sc24g0002060 Simmondsia chinensis HOM05D005431 ORTHO05D006762 7.9e-157 557.8 448 70.8
Potri.013G054300 Populus trichocarpa HOM05D005431 ORTHO05D006762 2.3e-156 556.2 458 69.0
Lalb_Chr14g0364381 Lupinus albus HOM05D005431 ORTHO05D006762 8.7e-156 554.3 437 70.0
HPP92_006679 Vanilla planifolia HOM05D005431 ORTHO05D006762 1.9e-155 553.1 438 71.5
Rhsim06G0113900 Rhododendron simsii HOM05D005431 ORTHO05D006762 2.5e-155 552.7 490 65.7
Eucgr.A02076 Eucalyptus grandis HOM05D005431 ORTHO05D006762 3.3e-155 552.4 450 68.9
Glyma.19G109200 Glycine max HOM05D005431 ORTHO05D006762 1.6e-154 550.1 452 68.4
Duzib177G0804 Durio zibethinus HOM05D005431 ORTHO05D006762 2.1e-154 549.7 449 71.0
ECA233G5562 Erigeron canadensis HOM05D005431 ORTHO05D006762 1.1e-153 547.4 450 68.0
Sabra13G0049000 Salix brachista HOM05D005431 ORTHO05D006762 1.4e-153 547.0 458 69.0
Lj1g0019204 Lotus japonicus HOM05D005431 ORTHO05D006762 3.1e-153 545.8 440 68.9
Ciclev10020067m.g Citrus clementina HOM05D005431 ORTHO05D006762 5.3e-153 545.0 452 69.9
CSS0005177 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 1.2e-152 543.9 443 70.2
HanXRQChr02g0054501 Helianthus annuus HOM05D005431 ORTHO05D006762 1.5e-152 543.5 446 70.0
arahy.Tifrunner.gnm1.ann1.UBW8VJ Arachis hypogaea HOM05D005431 ORTHO05D006762 2.6e-152 542.7 457 68.3
Medtr7g085290 Medicago truncatula HOM05D005431 ORTHO05D006762 5.8e-152 541.6 441 67.1
ATR0782G102 Amborella trichopoda HOM05D005431 ORTHO05D006762 2.2e-151 539.7 452 68.1
Peaxi162Scf00362g01188 Petunia axillaris HOM05D005431 ORTHO05D006762 1.9e-150 536.6 449 66.4
Prupe.6G097200 Prunus persica HOM05D005431 ORTHO05D006762 2.5e-150 536.2 444 67.8
Atru.chr2.1265 Acer truncatum HOM05D005431 ORTHO05D006762 4.2e-150 535.4 461 67.5
Nn7g35775 Nelumbo nucifera HOM05D005431 ORTHO05D006762 4.2e-150 535.4 447 66.0
AUR62035802 Chenopodium quinoa HOM05D005431 ORTHO05D006762 5.5e-150 535.0 443 68.2
MD03G1112900 Malus domestica HOM05D005431 ORTHO05D006762 5.5e-150 535.0 451 67.4
Os03g0326600 Oryza sativa ssp. japonica HOM05D005431 ORTHO05D006762 7.1e-150 534.6 441 68.0
Phvul.001G100700 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 2.7e-149 532.7 441 65.8
CANSAT78G0764 Cannabis sativa HOM05D005431 ORTHO05D006762 7.9e-149 531.2 451 68.1
Lsat_1_v5_gn_6_37921 Lactuca sativa HOM05D005431 ORTHO05D006762 8.7e-148 527.7 450 63.6
Ca_08254_v3 Cicer arietinum L. HOM05D005431 ORTHO05D006762 1.9e-147 526.6 439 67.4
Oeu051845.1 Olea europaea HOM05D005431 ORTHO05D006762 7.4e-147 524.6 440 66.4
SalBow1G3497 Salvia bowleyana HOM05D005431 ORTHO05D006762 3.7e-146 522.3 448 66.1
Cfa016425 Carpinus fangiana HOM05D005431 ORTHO05D006762 2.6e-144 516.2 433 69.5
Zm00001eb015560 Zea mays HOM05D005431 ORTHO05D006762 4.5e-144 515.4 451 63.0
PGSC0003DMG400001606 Solanum tuberosum HOM05D005431 ORTHO05D006762 7.6e-144 514.6 445 64.5
Solyc01g110820.4 Solanum lycopersicum HOM05D005431 ORTHO05D006762 6.5e-143 511.5 449 63.9
FvH4_3g32950 Fragaria vesca HOM05D005431 ORTHO05D006762 8.5e-143 511.1 448 67.2
Cc10_g14020 Coffea canephora HOM05D005431 ORTHO05D006762 3.2e-142 509.2 442 64.7
CDE02G0906 Ceratophyllum demersum HOM05D005431 ORTHO05D006762 9.4e-142 507.7 454 65.0
Psat3g089720 Pisum sativum HOM05D005431 ORTHO05D006762 4.6e-141 505.4 439 66.5
MSTRG.16956 Avicennia marina HOM05D005431 ORTHO05D006762 3.9e-140 502.3 451 62.5
PGR042G1130 Punica granatum HOM05D005431 ORTHO05D006762 2.5e-139 499.6 460 64.3
Haze_19398 Corylus avellana HOM05D005431 ORTHO05D006762 1.7e-138 496.9 451 65.4
Sopen01g052890 Solanum pennellii HOM05D005431 ORTHO05D006762 6.3e-138 495.0 448 62.1
FAN11G0735 Fragaria x ananassa HOM05D005431 ORTHO05D006762 1.1e-137 494.2 439 66.5
FAN16G2474 Fragaria x ananassa HOM05D005431 ORTHO05D006762 1.1e-137 494.2 448 62.1
VMungo1383G2520 Vigna mungo HOM05D005431 ORTHO05D006762 2.4e-137 493.0 439 63.3
Duzib128G1128 Durio zibethinus HOM05D005431 ORTHO05D006762 2.0e-136 490.0 442 64.5
THA.LOC104805792 Tarenaya hassleriana HOM05D005431 ORTHO05D006762 1.7e-135 486.9 448 62.3
RcHm_v2.0_Chr5g0060221 Rosa chinensis HOM05D005431 ORTHO05D006762 1.4e-134 483.8 443 64.3
SGA_v2.0_scaffold32G13347 Striga asiatica HOM05D005431 ORTHO05D006762 3.2e-134 482.6 448 62.3
TPR.G5901 Trifolium pratense HOM05D005431 ORTHO05D006762 3.6e-133 479.2 485 57.1
Sp1g07840 Schrenkiella parvula HOM05D005431 ORTHO05D006762 4.7e-133 478.8 445 58.0
AT1G09230 Arabidopsis thaliana HOM05D005431 ORTHO05D006762 6.1e-133 478.4 443 58.5
Nitab4.5_0001364g0090 Nicotiana tabacum HOM05D005431 ORTHO05D006762 6.1e-133 478.4 418 66.0
BraA06t23807Z Brassica rapa HOM05D005431 ORTHO05D006762 1.1e-131 474.2 457 57.1
Thhalv10007645m.g Eutrema salsugineum HOM05D005431 ORTHO05D006762 1.5e-131 473.8 452 57.1
BolC5t29482H Brassica oleracea HOM05D005431 ORTHO05D006762 5.7e-131 471.9 458 57.0
vmacro12472 Vaccinium macrocarpon HOM05D005431 ORTHO05D006762 3.7e-130 469.2 615 50.6
C05p07240 Brassica napus HOM05D005431 ORTHO05D006762 7.0e-129 464.9 446 57.0
Carub.0001s0857 Capsella rubella HOM05D005431 ORTHO05D006762 1.5e-128 463.8 443 56.0
Cfa011866 Carpinus fangiana HOM05D005431 ORTHO05D006762 1.3e-127 460.7 390 69.2
A06p05970 Brassica napus HOM05D005431 ORTHO05D006762 3.8e-127 459.1 446 55.8
AL1G19720 Arabidopsis lyrata HOM05D005431 ORTHO05D006762 4.2e-126 455.7 443 55.8
Actinidia02566 Actinidia chinensis HOM05D005431 ORTHO05D006762 6.7e-124 448.4 347 72.6
Haze_21236 Corylus avellana HOM05D005431 ORTHO05D006762 3.3e-123 446.0 389 67.4
BcaC05g24779 Brassica carinata HOM05D005431 ORTHO05D006762 8.2e-122 441.4 454 54.4
arahy.Tifrunner.gnm1.ann1.H79Q9S Arachis hypogaea HOM05D005431 ORTHO05D006762 5.0e-119 432.2 457 58.9
Aa31LG1G5950 Aethionema arabicum HOM05D005431 ORTHO05D006762 2.1e-117 426.8 472 53.2
EL10Ac8g19795 Beta vulgaris HOM05D005431 ORTHO05D006762 1.2e-115 421.0 318 77.4
Sed0005030 Sechium edule HOM05D005431 ORTHO05D006762 1.4e-113 414.1 352 64.8
SEGI_41626 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 3.1e-113 412.9 448 55.1
Migut.C00530 Erythranthe guttata HOM05D005431 ORTHO05D006762 3.5e-112 409.5 319 69.3
AUR62027554 Chenopodium quinoa HOM05D005431 ORTHO05D006762 3.6e-109 399.4 406 55.9
Cpa.g.sc594.2 Carica papaya HOM05D005431 ORTHO05D006762 7.7e-104 381.7 357 65.8
arahy.Tifrunner.gnm1.ann1.M3GFZ7 Arachis hypogaea HOM05D005431 ORTHO05D006762 1.2e-101 374.4 398 60.1
Potri.019G031700 Populus trichocarpa HOM05D005431 ORTHO05D006762 1.0e-95 354.8 322 66.5
CsaV3_6G010080 Cucumis sativus L. HOM05D005431 ORTHO05D006762 2.1e-93 347.1 306 68.0
SMO339G0047 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 3.2e-89 333.2 402 48.5
Pp3c5_17010 Physcomitrium patens HOM05D005431 ORTHO05D006762 1.4e-84 317.8 403 49.9
GSVIVG01010770001 Vitis vinifera HOM05D005431 ORTHO05D006762 1.4e-84 317.8 265 72.5
Aqoxy113s003 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 5.4e-81 305.8 429 46.2
AagrBONN_evm.TU.Sc2ySwM_228.5426 Anthoceros agrestis HOM05D005431 ORTHO05D006762 6.0e-80 302.4 330 53.3
ClCG02G009850 Citrullus lanatus HOM05D005431 ORTHO05D006762 2.5e-78 297.0 280 64.6
CARHR009190 Cardamine hirsuta HOM05D005431 ORTHO05D006762 6.4e-74 282.3 271 56.5
MBI05_g45098_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 9.6e-62 241.9 177 85.3
Hund08532 Selenicereus undatus HOM05D005431 ORTHO05D006762 3.6e-61 240.0 344 49.4
Rhsim03G0115400 Rhododendron simsii HOM05D005431 ORTHO05D006762 1.4e-60 238.0 346 47.1
Mapoly0054s0019 Marchantia polymorpha HOM05D005431 ORTHO05D006762 4.6e-56 223.0 286 49.7
BcaB03g13279 Brassica carinata HOM05D005431 ORTHO05D006762 4.8e-53 213.0 190 59.5
CBR_g41665 Chara braunii HOM05D005431 ORTHO05D006762 9.0e-52 208.8 599 31.6
AagrBONN_evm.TU.Sc2ySwM_117.3064__3065 Anthoceros agrestis HOM05D005431 ORTHO05D006762 1.4e-44 184.9 256 50.4
GSVIVG01010771001 Vitis vinifera HOM05D005431 ORTHO05D006762 7.6e-43 179.1 154 62.3
Hund08530 Selenicereus undatus HOM05D005431 ORTHO05D006762 1.6e-40 171.4 103 83.5
Cpa.g.sc3384.1 Carica papaya HOM05D005431 ORTHO05D006762 2.3e-39 167.5 102 79.4
TPR.G5899 Trifolium pratense HOM05D000002 ORTHO05D000001 3.0e-39 167.2 165 62.4
Phvul.004G137800 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 2.1e-37 161.0 93 80.6
Aqoxy6G02072 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 4.8e-37 159.8 351 35.6
MELO3C013491.2 Cucumis melo HOM05D005431 ORTHO05D006762 5.1e-31 139.8 180 56.7
MBI05_g33993_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 9.7e-30 135.6 100 73.0
Lsat_1_v5_gn_3_133701 Lactuca sativa HOM05D005431 ORTHO05D006762 1.3e-26 125.2 130 60.8
TPR.G552 Trifolium pratense HOM05D005431 ORTHO05D006762 6.1e-24 116.3 105 61.9
Pp3c25_8310 Physcomitrium patens HOM05D005431 ORTHO05D006762 1.5e-19 101.7 115 48.7
AagrBONN_evm.TU.Sc2ySwM_228.2880 Anthoceros agrestis HOM05D005431 ORTHO05D006762 1.0e-15 89.0 101 45.5
TPR.G5921 Trifolium pratense HOM05D005431 ORTHO05D006762 3.9e-15 87.0 54 74.1
SHI14717 Sapria himalayana HOM05D005431 ORTHO05D006762 5.1e-15 86.7 127 48.0
SHI14712 Sapria himalayana HOM05D000001 ORTHO05D009229 2.0e-14 84.7 45 84.4
C08p12570 Brassica napus HOM05D005431 ORTHO05D006762 6.3e-13 79.7 49 77.6
BolC8t48895H Brassica oleracea HOM05D005431 ORTHO05D006762 6.3e-13 79.7 49 77.6
SHI14714 Sapria himalayana HOM05D005431 ORTHO05D006762 7.0e-12 76.3 52 65.4
SMO116G0263 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 1.5e-11 75.1 83 45.8
SGA_v2.0_scaffold612G53193 Striga asiatica HOM05D005431 ORTHO05D006762 5.0e-10 70.1 50 64.0
CAN.G134.235 Capsicum annuum HOM05D005431 ORTHO05D006762 1.1e-09 68.9 56 57.1
Lsat_1_v5_gn_6_94960 Lactuca sativa HOM05D005431 ORTHO05D003355 9.4e-09 65.9 56 58.9
ClCG02G009830 Citrullus lanatus HOM05D005431 ORTHO05D006762 2.1e-08 64.7 41 75.6
SEGI_17961 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 2.1e-08 64.7 83 47.0
SHI14719 Sapria himalayana HOM05D005431 ORTHO05D006762 4.7e-08 63.5 33 87.9
Ah.14g086750 Amaranthus hybridus HOM05D005431 ORTHO05D006762 1.0e-07 62.4 35 80.0
RcHm_v2.0_Chr5g0076741 Rosa chinensis HOM05D005431 ORTHO05D006762 2.3e-07 61.2 64 60.9
Lsat_1_v5_gn_5_27580 Lactuca sativa HOM05D005974 ORTHO05D007201 1.5e-06 58.5 60 53.3


User provided reference genes

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