Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A1139T47 Lonicera japonica HOM05D005431 ORTHO05D006762 1.1e-265 919.5 480 100.0
Dinv18088 Davidia involucrata HOM05D005431 ORTHO05D006762 7.2e-193 677.6 481 76.3
CSS0010563 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 8.9e-183 644.0 477 75.7
TAR633G0900 Trochodendron aralioides HOM05D005431 ORTHO05D006762 1.8e-180 636.3 481 71.5
GSVIVG01020933001 Vitis vinifera HOM05D005431 ORTHO05D006762 2.0e-174 616.3 450 75.1
CSS0005177 Camellia sinensis var. sinensis HOM05D005431 ORTHO05D006762 4.4e-174 615.1 477 73.2
Thecc.05G259000 Theobroma cacao HOM05D005431 ORTHO05D006762 3.7e-173 612.1 486 70.0
Rhsim06G0113900 Rhododendron simsii HOM05D005431 ORTHO05D006762 8.3e-173 610.9 512 68.4
QL07p020652 Quercus lobata HOM05D005431 ORTHO05D006762 4.1e-172 608.6 472 71.6
Lsat_1_v5_gn_6_37921 Lactuca sativa HOM05D005431 ORTHO05D006762 1.2e-171 607.1 481 67.8
Gohir.A11G240400 Gossypium hirsutum HOM05D005431 ORTHO05D006762 3.9e-170 602.1 487 69.0
COL.COLO4_08630 Corchorus olitorius HOM05D005431 ORTHO05D006762 1.5e-169 600.1 490 68.2
Gohir.D11G249800 Gossypium hirsutum HOM05D005431 ORTHO05D006762 1.6e-168 596.7 487 68.2
Manes.08G148100 Manihot esculenta HOM05D005431 ORTHO05D006762 2.1e-168 596.3 450 72.7
HanXRQChr02g0054501 Helianthus annuus HOM05D005431 ORTHO05D006762 4.7e-168 595.1 482 68.0
TWI32G0483 Tripterygium wilfordii HOM05D005431 ORTHO05D006762 5.8e-166 588.2 463 70.2
Gorai.007G267600 Gossypium raimondii HOM05D005431 ORTHO05D006762 1.3e-165 587.0 481 68.2
ECA233G5562 Erigeron canadensis HOM05D005431 ORTHO05D006762 6.4e-165 584.7 457 71.6
Aqoxy6G02574 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.1e-164 583.9 457 70.5
Duzib177G0804 Durio zibethinus HOM05D005431 ORTHO05D006762 4.1e-164 582.0 489 67.3
CiPaw.10G000400 Carya illinoinensis HOM05D005431 ORTHO05D006762 2.7e-163 579.3 463 70.4
Sc24g0002060 Simmondsia chinensis HOM05D005431 ORTHO05D006762 7.8e-163 577.8 469 67.2
PSO339G6142 Papaver somniferum HOM05D005431 ORTHO05D006762 2.3e-162 576.2 456 69.7
Oeu051845.1 Olea europaea HOM05D005431 ORTHO05D006762 3.9e-162 575.5 475 65.9
PSO384G4368 Papaver somniferum HOM05D005431 ORTHO05D006762 1.1e-161 573.9 454 70.0
Potri.013G054300 Populus trichocarpa HOM05D005431 ORTHO05D006762 1.1e-161 573.9 483 67.3
Peaxi162Scf00362g01188 Petunia axillaris HOM05D005431 ORTHO05D006762 1.6e-160 570.1 447 66.4
Aqoxy2G02389 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 2.1e-160 569.7 457 68.9
MBI13_g30325_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 1.4e-159 567.0 454 70.0
Ciclev10020067m.g Citrus clementina HOM05D005431 ORTHO05D006762 1.5e-158 563.5 446 68.6
AUR62035802 Chenopodium quinoa HOM05D005431 ORTHO05D006762 4.4e-158 562.0 449 67.7
Eucgr.A02076 Eucalyptus grandis HOM05D005431 ORTHO05D006762 5.8e-158 561.6 449 69.5
Atru.chr2.1265 Acer truncatum HOM05D005431 ORTHO05D006762 9.9e-158 560.8 473 67.7
Sabra13G0049000 Salix brachista HOM05D005431 ORTHO05D006762 2.2e-157 559.7 484 66.5
Glyma.16G042800 Glycine max HOM05D005431 ORTHO05D006762 6.4e-157 558.1 466 66.3
Glyma.19G109200 Glycine max HOM05D005431 ORTHO05D006762 1.9e-156 556.6 468 66.7
Prupe.6G097200 Prunus persica HOM05D005431 ORTHO05D006762 2.4e-156 556.2 446 69.1
arahy.Tifrunner.gnm1.ann1.UBW8VJ Arachis hypogaea HOM05D005431 ORTHO05D006762 5.4e-156 555.1 453 67.3
Medtr7g085290 Medicago truncatula HOM05D005431 ORTHO05D006762 3.5e-155 552.4 462 65.8
Solyc01g110820.4 Solanum lycopersicum HOM05D005431 ORTHO05D006762 1.0e-154 550.8 447 66.0
Lalb_Chr14g0364381 Lupinus albus HOM05D005431 ORTHO05D006762 1.3e-154 550.4 465 65.6
MD03G1112900 Malus domestica HOM05D005431 ORTHO05D006762 2.3e-154 549.7 467 67.2
PGSC0003DMG400001606 Solanum tuberosum HOM05D005431 ORTHO05D006762 1.1e-153 547.4 450 65.6
Cc10_g14020 Coffea canephora HOM05D005431 ORTHO05D006762 4.3e-153 545.4 442 68.3
Lj1g0019204 Lotus japonicus HOM05D005431 ORTHO05D006762 4.3e-153 545.4 450 66.7
CANSAT78G0764 Cannabis sativa HOM05D005431 ORTHO05D006762 6.2e-152 541.6 482 63.5
SalBow1G3497 Salvia bowleyana HOM05D005431 ORTHO05D006762 1.4e-151 540.4 470 65.5
MSTRG.16956 Avicennia marina HOM05D005431 ORTHO05D006762 3.1e-151 539.3 454 64.3
Ca_08254_v3 Cicer arietinum L. HOM05D005431 ORTHO05D006762 3.4e-150 535.8 462 64.7
PGR042G1130 Punica granatum HOM05D005431 ORTHO05D006762 5.8e-150 535.0 480 62.9
Cfa016425 Carpinus fangiana HOM05D005431 ORTHO05D006762 9.9e-150 534.3 453 67.8
Sopen01g052890 Solanum pennellii HOM05D005431 ORTHO05D006762 1.7e-149 533.5 447 64.0
Phvul.001G100700 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 1.1e-148 530.8 463 64.4
FvH4_3g32950 Fragaria vesca HOM05D005431 ORTHO05D006762 1.0e-146 524.2 451 65.6
FAN16G2474 Fragaria x ananassa HOM05D005431 ORTHO05D006762 5.1e-146 521.9 460 62.8
HPP92_006679 Vanilla planifolia HOM05D005431 ORTHO05D006762 8.7e-146 521.2 452 64.2
Haze_19398 Corylus avellana HOM05D005431 ORTHO05D006762 7.3e-145 518.1 470 64.3
vmacro12472 Vaccinium macrocarpon HOM05D005431 ORTHO05D006762 2.1e-144 516.5 641 52.1
Nitab4.5_0001364g0090 Nicotiana tabacum HOM05D005431 ORTHO05D006762 3.6e-144 515.8 424 65.6
SGA_v2.0_scaffold32G13347 Striga asiatica HOM05D005431 ORTHO05D006762 3.6e-144 515.8 482 61.4
Duzib128G1128 Durio zibethinus HOM05D005431 ORTHO05D006762 1.2e-142 510.8 485 62.7
RcHm_v2.0_Chr5g0060221 Rosa chinensis HOM05D005431 ORTHO05D006762 1.2e-142 510.8 467 62.3
Os03g0326600 Oryza sativa ssp. japonica HOM05D005431 ORTHO05D006762 1.5e-142 510.4 443 64.8
Psat3g089720 Pisum sativum HOM05D005431 ORTHO05D006762 1.5e-142 510.4 462 63.2
FAN11G0735 Fragaria x ananassa HOM05D005431 ORTHO05D006762 3.4e-142 509.2 445 64.9
TPR.G5901 Trifolium pratense HOM05D005431 ORTHO05D006762 9.9e-142 507.7 514 57.4
Nn7g35775 Nelumbo nucifera HOM05D005431 ORTHO05D006762 3.2e-140 502.7 483 59.0
CDE02G0906 Ceratophyllum demersum HOM05D005431 ORTHO05D006762 6.0e-139 498.4 455 63.3
Zm00001eb015560 Zea mays HOM05D005431 ORTHO05D006762 7.9e-139 498.0 456 61.0
VMungo1383G2520 Vigna mungo HOM05D005431 ORTHO05D006762 5.6e-137 491.9 439 64.0
ATR0782G102 Amborella trichopoda HOM05D005431 ORTHO05D006762 4.8e-136 488.8 461 63.1
BolC5t29482H Brassica oleracea HOM05D005431 ORTHO05D006762 4.0e-135 485.7 471 57.1
Sp1g07840 Schrenkiella parvula HOM05D005431 ORTHO05D006762 5.3e-135 485.3 452 58.4
Actinidia02566 Actinidia chinensis HOM05D005431 ORTHO05D006762 1.5e-134 483.8 348 77.0
AT1G09230 Arabidopsis thaliana HOM05D005431 ORTHO05D006762 1.5e-134 483.8 446 58.7
BraA06t23807Z Brassica rapa HOM05D005431 ORTHO05D006762 2.6e-134 483.0 453 57.8
THA.LOC104805792 Tarenaya hassleriana HOM05D005431 ORTHO05D006762 7.6e-134 481.5 447 58.8
C05p07240 Brassica napus HOM05D005431 ORTHO05D006762 3.8e-133 479.2 464 56.7
Thhalv10007645m.g Eutrema salsugineum HOM05D005431 ORTHO05D006762 7.1e-132 474.9 446 57.6
AL1G19720 Arabidopsis lyrata HOM05D005431 ORTHO05D006762 1.9e-129 466.8 446 57.2
A06p05970 Brassica napus HOM05D005431 ORTHO05D006762 1.6e-128 463.8 453 56.7
Carub.0001s0857 Capsella rubella HOM05D005431 ORTHO05D006762 2.8e-128 463.0 446 56.3
Cfa011866 Carpinus fangiana HOM05D005431 ORTHO05D006762 2.4e-127 459.9 408 64.7
BcaC05g24779 Brassica carinata HOM05D005431 ORTHO05D006762 4.5e-126 455.7 472 54.2
Aa31LG1G5950 Aethionema arabicum HOM05D005431 ORTHO05D006762 3.8e-125 452.6 507 52.1
Haze_21236 Corylus avellana HOM05D005431 ORTHO05D006762 3.2e-124 449.5 408 64.2
arahy.Tifrunner.gnm1.ann1.H79Q9S Arachis hypogaea HOM05D005431 ORTHO05D006762 2.1e-123 446.8 453 58.9
Cpa.g.sc594.2 Carica papaya HOM05D005431 ORTHO05D006762 4.5e-118 429.1 384 64.3
SEGI_41626 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 2.7e-115 419.9 468 52.6
Migut.C00530 Erythranthe guttata HOM05D005431 ORTHO05D006762 1.0e-114 417.9 325 68.9
Sed0005030 Sechium edule HOM05D005431 ORTHO05D006762 3.0e-114 416.4 355 63.7
AUR62027554 Chenopodium quinoa HOM05D005431 ORTHO05D006762 1.1e-113 414.5 406 56.7
EL10Ac8g19795 Beta vulgaris HOM05D005431 ORTHO05D006762 1.9e-113 413.7 326 70.6
Potri.019G031700 Populus trichocarpa HOM05D005431 ORTHO05D006762 3.7e-104 382.9 346 63.6
arahy.Tifrunner.gnm1.ann1.M3GFZ7 Arachis hypogaea HOM05D005431 ORTHO05D006762 5.3e-103 379.0 401 58.4
CsaV3_6G010080 Cucumis sativus L. HOM05D005431 ORTHO05D006762 5.1e-98 362.5 336 62.2
GSVIVG01010770001 Vitis vinifera HOM05D005431 ORTHO05D006762 1.1e-92 344.7 265 74.3
SMO339G0047 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 1.2e-86 324.7 405 48.1
Pp3c5_17010 Physcomitrium patens HOM05D005431 ORTHO05D006762 4.2e-84 316.2 398 49.5
ClCG02G009850 Citrullus lanatus HOM05D005431 ORTHO05D006762 3.7e-80 303.1 296 60.5
AagrBONN_evm.TU.Sc2ySwM_228.5426 Anthoceros agrestis HOM05D005431 ORTHO05D006762 1.1e-79 301.6 334 49.7
CARHR009190 Cardamine hirsuta HOM05D005431 ORTHO05D006762 2.2e-72 277.3 280 55.7
Aqoxy113s003 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 2.7e-70 270.4 434 42.9
Rhsim03G0115400 Rhododendron simsii HOM05D005431 ORTHO05D006762 5.2e-66 256.1 344 50.0
Hund08532 Selenicereus undatus HOM05D005431 ORTHO05D006762 2.2e-64 250.8 389 46.0
Mapoly0054s0019 Marchantia polymorpha HOM05D005431 ORTHO05D006762 3.0e-61 240.4 284 50.7
BcaB03g13279 Brassica carinata HOM05D005431 ORTHO05D006762 9.8e-57 225.3 180 61.7
CBR_g41665 Chara braunii HOM05D005431 ORTHO05D006762 3.0e-53 213.8 623 31.9
GSVIVG01010771001 Vitis vinifera HOM05D005431 ORTHO05D006762 7.8e-46 189.1 147 67.3
AagrBONN_evm.TU.Sc2ySwM_117.3064__3065 Anthoceros agrestis HOM05D005431 ORTHO05D006762 1.6e-43 181.4 260 45.0
Hund08530 Selenicereus undatus HOM05D005431 ORTHO05D006762 4.4e-41 173.3 98 85.7
TPR.G5899 Trifolium pratense HOM05D000002 ORTHO05D000001 3.7e-40 170.2 161 62.1
Cpa.g.sc3384.1 Carica papaya HOM05D005431 ORTHO05D006762 6.4e-40 169.5 99 83.8
Phvul.004G137800 Phaseolus vulgaris HOM05D005431 ORTHO05D006762 1.6e-38 164.9 93 80.6
MBI05_g45098_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 3.3e-36 157.1 188 59.6
MELO3C013491.2 Cucumis melo HOM05D005431 ORTHO05D006762 7.3e-36 156.0 181 53.6
Lsat_1_v5_gn_3_133701 Lactuca sativa HOM05D005431 ORTHO05D006762 5.1e-29 133.3 178 53.4
Aqoxy6G02072 Aquilegia oxysepala HOM05D005431 ORTHO05D006762 1.7e-24 118.2 355 32.4
TPR.G552 Trifolium pratense HOM05D005431 ORTHO05D006762 4.9e-24 116.7 105 62.9
MBI05_g33993_MAGBIO Magnolia biondii HOM05D005431 ORTHO05D006762 7.1e-23 112.8 97 58.8
SHI14717 Sapria himalayana HOM05D005431 ORTHO05D006762 7.4e-20 102.8 124 51.6
Pp3c25_8310 Physcomitrium patens HOM05D005431 ORTHO05D006762 6.2e-19 99.8 114 46.5
TPR.G5921 Trifolium pratense HOM05D005431 ORTHO05D006762 6.9e-18 96.3 54 81.5
SHI14712 Sapria himalayana HOM05D000001 ORTHO05D009229 2.9e-16 90.9 45 86.7
C08p12570 Brassica napus HOM05D005431 ORTHO05D006762 2.1e-14 84.7 49 79.6
BolC8t48895H Brassica oleracea HOM05D005431 ORTHO05D006762 2.1e-14 84.7 49 79.6
AagrBONN_evm.TU.Sc2ySwM_228.2880 Anthoceros agrestis HOM05D005431 ORTHO05D006762 6.0e-14 83.2 148 35.8
SMO116G0263 Selaginella moellendorffii HOM05D005431 ORTHO05D006762 8.7e-13 79.3 81 48.1
SHI14714 Sapria himalayana HOM05D005431 ORTHO05D006762 8.1e-11 72.8 52 63.5
CAN.G134.235 Capsicum annuum HOM05D005431 ORTHO05D006762 4.0e-10 70.5 56 57.1
SGA_v2.0_scaffold612G53193 Striga asiatica HOM05D005431 ORTHO05D006762 9.0e-10 69.3 47 63.8
Lsat_1_v5_gn_6_94960 Lactuca sativa HOM05D005431 ORTHO05D003355 3.4e-09 67.4 40 80.0
Ah.14g086750 Amaranthus hybridus HOM05D005431 ORTHO05D006762 1.7e-08 65.1 41 70.7
Lsat_1_v5_gn_5_27580 Lactuca sativa HOM05D005974 ORTHO05D007201 2.2e-08 64.7 61 57.4
RcHm_v2.0_Chr5g0076741 Rosa chinensis HOM05D005431 ORTHO05D006762 2.2e-08 64.7 49 69.4
ClCG02G009830 Citrullus lanatus HOM05D005431 ORTHO05D006762 8.4e-08 62.8 41 73.2
SHI14719 Sapria himalayana HOM05D005431 ORTHO05D006762 1.1e-07 62.4 33 84.8
SEGI_17961 Sequoiadendron giganteum HOM05D005431 ORTHO05D006762 5.5e-07 60.1 83 43.4


User provided reference genes

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