Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund24902 Selenicereus undatus HOM05D003686 ORTHO05D004322 1.5e-118 429.9 272 100.0
EL10Ac2g03326 Beta vulgaris HOM05D003686 ORTHO05D004322 4.3e-49 199.1 207 62.3
AUR62025901 Chenopodium quinoa HOM05D003686 ORTHO05D004322 4.9e-45 185.7 203 56.7
AUR62025902 Chenopodium quinoa HOM05D003686 ORTHO05D004322 4.9e-45 185.7 203 56.7
Ah.12g061550 Amaranthus hybridus HOM05D003686 ORTHO05D004322 7.1e-44 181.8 208 58.7
AUR62029649 Chenopodium quinoa HOM05D003686 ORTHO05D004322 6.2e-40 168.7 206 51.0
TAR362G1277 Trochodendron aralioides HOM05D003686 ORTHO05D004322 1.5e-30 137.5 221 42.1
Haze_04804 Corylus avellana HOM05D003686 ORTHO05D004322 6.4e-29 132.1 217 41.9
TAR636G2878 Trochodendron aralioides HOM05D003686 ORTHO05D004322 6.4e-29 132.1 143 56.6
Sc25g0004660 Simmondsia chinensis HOM05D003686 ORTHO05D004322 1.4e-28 131.0 209 49.8
TAR365G0683 Trochodendron aralioides HOM05D003686 ORTHO05D004322 3.2e-28 129.8 222 41.0
PGR031G1643 Punica granatum HOM05D003686 ORTHO05D004322 3.5e-27 126.3 139 59.7
Eucgr.A00286 Eucalyptus grandis HOM05D003686 ORTHO05D004322 4.6e-27 125.9 177 51.4
Gorai.004G053600 Gossypium raimondii HOM05D003686 ORTHO05D004322 7.8e-27 125.2 141 55.3
Aqoxy2G03146 Aquilegia oxysepala HOM05D003686 ORTHO05D004322 1.0e-26 124.8 145 53.8
Gohir.D08G053600 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.0e-26 124.8 141 55.3
Glyma.10G021900 Glycine max HOM05D003686 ORTHO05D004322 1.3e-26 124.4 140 55.0
Gohir.A08G043900 Gossypium hirsutum HOM05D003686 ORTHO05D004322 3.0e-26 123.2 178 46.6
Gohir.D11G123300 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.9e-25 120.6 139 56.8
Sabra03G0032800 Salix brachista HOM05D003686 ORTHO05D004322 1.9e-25 120.6 139 55.4
COL.COLO4_08036 Corchorus olitorius HOM05D003686 ORTHO05D004322 4.3e-25 119.4 138 62.3
Glyma.02G152300 Glycine max HOM05D003686 ORTHO05D004322 4.3e-25 119.4 105 62.9
Gorai.007G132200 Gossypium raimondii HOM05D003686 ORTHO05D004322 4.3e-25 119.4 106 64.2
Cfa010467 Carpinus fangiana HOM05D003686 ORTHO05D004322 5.6e-25 119.0 105 61.9
Gohir.A11G118400 Gossypium hirsutum HOM05D003686 ORTHO05D004322 7.3e-25 118.6 106 64.2
TWI14G0352 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 7.3e-25 118.6 133 57.9
Manes.01G213100 Manihot esculenta HOM05D003686 ORTHO05D004322 1.3e-24 117.9 136 58.1
VMungo0720G0802 Vigna mungo HOM05D003686 ORTHO05D004322 1.6e-24 117.5 139 55.4
FAN20G1534 Fragaria x ananassa HOM05D003686 ORTHO05D004322 2.1e-24 117.1 98 66.3
Potri.003G058400 Populus trichocarpa HOM05D003686 ORTHO05D004322 2.1e-24 117.1 145 53.1
QL04p005272 Quercus lobata HOM05D003686 ORTHO05D004322 2.1e-24 117.1 138 52.9
CiPaw.07G099200 Carya illinoinensis HOM05D003686 ORTHO05D004322 3.6e-24 116.3 170 45.9
GSVIVG01011011001 Vitis vinifera HOM05D003686 ORTHO05D004322 3.6e-24 116.3 144 56.9
Phvul.007G166600 Phaseolus vulgaris HOM05D003686 ORTHO05D004322 4.8e-24 115.9 109 62.4
Lalb_Chr06g0163281 Lupinus albus HOM05D003686 ORTHO05D004322 6.2e-24 115.5 127 55.9
Nn1g08910 Nelumbo nucifera HOM05D003686 ORTHO05D004322 6.2e-24 115.5 143 55.2
Cpa.g.sc9.157 Carica papaya HOM05D003686 ORTHO05D004322 8.1e-24 115.2 127 55.9
FAN20G0133 Fragaria x ananassa HOM05D003686 ORTHO05D004322 8.1e-24 115.2 96 66.7
FAN27G0391 Fragaria x ananassa HOM05D003686 ORTHO05D004322 8.1e-24 115.2 96 66.7
Lalb_Chr02g0143061 Lupinus albus HOM05D003686 ORTHO05D004322 8.1e-24 115.2 141 54.6
CANSAT78G2257 Cannabis sativa HOM05D003686 ORTHO05D004322 3.1e-23 113.2 181 48.6
Ciclev10022350m.g Citrus clementina HOM05D003686 ORTHO05D004322 3.1e-23 113.2 107 62.6
QL07p015848 Quercus lobata HOM05D003686 ORTHO05D004322 3.1e-23 113.2 179 44.7
RcHm_v2.0_Chr6g0292481 Rosa chinensis HOM05D003686 ORTHO05D004322 3.1e-23 113.2 190 44.7
CSS0007511 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 5.3e-23 112.5 111 57.7
CSS0037271 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 5.3e-23 112.5 111 57.7
TWI23G0547 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 5.3e-23 112.5 104 62.5
Actinidia00703 Actinidia chinensis HOM05D003686 ORTHO05D004322 6.9e-23 112.1 105 59.0
Eucgr.B02749 Eucalyptus grandis HOM05D003686 ORTHO05D004322 6.9e-23 112.1 103 65.0
Manes.05G068800 Manihot esculenta HOM05D003686 ORTHO05D004322 9.0e-23 111.7 110 60.0
Prupe.8G251800 Prunus persica HOM05D003686 ORTHO05D004322 9.0e-23 111.7 98 64.3
HPP92_021461 Vanilla planifolia HOM05D003686 ORTHO05D004322 9.0e-23 111.7 137 51.1
Psat6g168000 Pisum sativum HOM05D003686 ORTHO05D004322 1.2e-22 111.3 138 55.1
QL93p0358_0011 Quercus lobata HOM05D003686 ORTHO05D004322 2.0e-22 110.5 105 60.0
FAN15G3346 Fragaria x ananassa HOM05D003686 ORTHO05D004322 3.4e-22 109.8 99 64.6
Nn2g12370 Nelumbo nucifera HOM05D003686 ORTHO05D004322 3.4e-22 109.8 177 46.3
Nitab4.5_0001149g0030 Nicotiana tabacum HOM05D003686 ORTHO05D004322 3.4e-22 109.8 181 44.8
FvH4_2g24650 Fragaria vesca HOM05D003686 ORTHO05D004322 4.5e-22 109.4 96 64.6
FAN24G2968 Fragaria x ananassa HOM05D003686 ORTHO05D004322 5.8e-22 109.0 175 48.0
DCAR_007018 Daucus carota HOM05D003686 ORTHO05D004322 9.9e-22 108.2 140 50.0
Atru.chr5.1287 Acer truncatum HOM05D003686 ORTHO05D004322 1.3e-21 107.8 173 49.7
TPR.G15798 Trifolium pratense HOM05D003686 ORTHO05D004322 1.7e-21 107.5 138 54.3
MSTRG.21821 Avicennia marina HOM05D003686 ORTHO05D004322 2.9e-21 106.7 137 54.0
Sed0010038 Sechium edule HOM05D003686 ORTHO05D004322 2.9e-21 106.7 171 49.7
Ca_09109_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 3.8e-21 106.3 138 52.9
PSO801G0146 Papaver somniferum HOM05D003686 ORTHO05D004322 3.8e-21 106.3 111 55.9
Os02g0266100 Oryza sativa ssp. japonica HOM05D003686 ORTHO05D004322 4.9e-21 105.9 103 63.1
MD03G1275200 Malus domestica HOM05D003686 ORTHO05D004322 8.4e-21 105.1 140 50.0
Lsat_1_v5_gn_5_188760 Lactuca sativa HOM05D003686 ORTHO05D004322 1.4e-20 104.4 117 53.0
Hma1.2p1_0643F.1_g194700 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 1.9e-20 104.0 102 60.8
Hma1.2p1_0643F.1_g194711 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 1.9e-20 104.0 102 60.8
THA.LOC104826011 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 1.9e-20 104.0 118 60.2
Hma1.2p1_0643F.1_g194695 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 2.4e-20 103.6 141 49.6
Hma1.2p1_0643F.1_g194710 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 2.4e-20 103.6 141 49.6
Medtr1g088990 Medicago truncatula HOM05D003686 ORTHO05D004322 2.4e-20 103.6 110 58.2
Solyc01g067830.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 2.4e-20 103.6 173 43.4
Migut.N00130 Erythranthe guttata HOM05D003686 ORTHO05D004322 3.2e-20 103.2 136 50.7
Nitab4.5_0001624g0040 Nicotiana tabacum HOM05D003686 ORTHO05D004322 4.2e-20 102.8 181 42.5
ATR0706G002 Amborella trichopoda HOM05D003686 ORTHO05D004322 5.4e-20 102.4 182 42.3
Lj2P1184T34 Lonicera japonica HOM05D003686 ORTHO05D004322 5.4e-20 102.4 136 48.5
CAN.G185.6 Capsicum annuum HOM05D003686 ORTHO05D004322 7.1e-20 102.1 173 46.8
ClCG09G006530 Citrullus lanatus HOM05D003686 ORTHO05D004322 9.3e-20 101.7 122 55.7
Peaxi162Scf00936g00218 Petunia axillaris HOM05D003686 ORTHO05D004322 9.3e-20 101.7 174 42.0
CAN.G1006.23 Capsicum annuum HOM05D003686 ORTHO05D004322 1.2e-19 101.3 121 53.7
Ca_10377_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 1.2e-19 101.3 173 46.2
Ca_29655_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 1.2e-19 101.3 173 46.2
MELO3C015891.2 Cucumis melo HOM05D003686 ORTHO05D004322 1.2e-19 101.3 95 62.1
THA.LOC104817532 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 1.2e-19 101.3 119 56.3
CsaV3_7G028310 Cucumis sativus L. HOM05D003686 ORTHO05D004322 1.6e-19 100.9 106 59.4
DCAR_012430 Daucus carota HOM05D003686 ORTHO05D004322 1.6e-19 100.9 115 53.9
Duzib138G0197 Durio zibethinus HOM05D003686 ORTHO05D004322 1.6e-19 100.9 105 58.1
CiPaw.08G100800 Carya illinoinensis HOM05D003686 ORTHO05D004322 2.1e-19 100.5 106 59.4
Thhalv10028986m.g Eutrema salsugineum HOM05D003686 ORTHO05D004322 3.5e-19 99.8 99 60.6
PSO339G4974 Papaver somniferum HOM05D003686 ORTHO05D004322 3.5e-19 99.8 121 52.1
Sp6g03160 Schrenkiella parvula HOM05D003686 ORTHO05D004322 3.5e-19 99.8 99 60.6
Thecc.10G102800 Theobroma cacao HOM05D003686 ORTHO05D004322 3.5e-19 99.8 137 51.8
Mapoly0103s0046 Marchantia polymorpha HOM05D003686 ORTHO05D004322 4.6e-19 99.4 144 45.1
Solyc06g008860.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 4.6e-19 99.4 150 46.7
Sopen06g003610 Solanum pennellii HOM05D003686 ORTHO05D004322 4.6e-19 99.4 189 41.8
unitig_61.g26148 Utricularia gibba HOM05D003686 ORTHO05D004322 4.6e-19 99.4 133 49.6
ECA248G2178 Erigeron canadensis HOM05D003686 ORTHO05D004322 6.0e-19 99.0 120 51.7
arahy.Tifrunner.gnm1.ann1.TAZ1K7 Arachis hypogaea HOM05D003686 ORTHO05D004322 7.9e-19 98.6 143 46.2
Duzib133G0241 Durio zibethinus HOM05D003686 ORTHO05D004322 7.9e-19 98.6 138 51.4
Lj1g0025208 Lotus japonicus HOM05D003686 ORTHO05D004322 7.9e-19 98.6 181 42.0
Rhsim13G0017700 Rhododendron simsii HOM05D003686 ORTHO05D004322 1.0e-18 98.2 154 45.5
Sed0008045 Sechium edule HOM05D003686 ORTHO05D004322 1.0e-18 98.2 118 53.4
PGSC0003DMG400021997 Solanum tuberosum HOM05D003686 ORTHO05D004322 1.0e-18 98.2 189 41.3
SGA_v2.0_scaffold36G14363 Striga asiatica HOM05D003686 ORTHO05D004322 1.0e-18 98.2 141 46.8
Mapoly0087s0074 Marchantia polymorpha HOM05D003686 ORTHO05D004322 1.3e-18 97.8 139 51.1
Nitab4.5_0000295g0050 Nicotiana tabacum HOM05D003686 ORTHO05D004322 1.3e-18 97.8 139 46.8
MD11G1297300 Malus domestica HOM05D003686 ORTHO05D004322 1.8e-18 97.4 143 51.0
Medtr7g107640 Medicago truncatula HOM05D003686 ORTHO05D004322 1.8e-18 97.4 99 58.6
C09p02540 Brassica napus HOM05D003686 ORTHO05D004322 2.3e-18 97.1 94 60.6
BcaB01g01979 Brassica carinata HOM05D003686 ORTHO05D004322 3.0e-18 96.7 93 61.3
A03p30600 Brassica napus HOM05D003686 ORTHO05D004322 3.0e-18 96.7 102 59.8
BraA03t12240Z Brassica rapa HOM05D003686 ORTHO05D004322 3.0e-18 96.7 102 59.8
CDE11G0890 Ceratophyllum demersum HOM05D003686 ORTHO05D004322 3.0e-18 96.7 109 55.0
arahy.Tifrunner.gnm1.ann1.MV1AMG Arachis hypogaea HOM05D003686 ORTHO05D004322 3.9e-18 96.3 113 52.2
vmacro17192 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 3.9e-18 96.3 136 50.7
AT4G03120 Arabidopsis thaliana HOM05D003686 ORTHO05D004322 5.1e-18 95.9 107 57.9
BolC9t53184H Brassica oleracea HOM05D003686 ORTHO05D004322 5.1e-18 95.9 117 54.7
BcaB01g02510 Brassica carinata HOM05D003686 ORTHO05D004322 6.7e-18 95.5 93 61.3
BolC3t16013H Brassica oleracea HOM05D003686 ORTHO05D004322 6.7e-18 95.5 102 58.8
C03p37160 Brassica napus HOM05D003686 ORTHO05D004322 8.7e-18 95.1 115 55.7
Lj3A810T51 Lonicera japonica HOM05D003686 ORTHO05D004322 8.7e-18 95.1 121 52.9
A09p02440 Brassica napus HOM05D003686 ORTHO05D004322 1.1e-17 94.7 93 59.1
BraA09t35891Z Brassica rapa HOM05D003686 ORTHO05D004322 1.1e-17 94.7 93 59.1
BcaC01g06704 Brassica carinata HOM05D003686 ORTHO05D004322 1.5e-17 94.4 93 60.2
vmacro02511 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 1.5e-17 94.4 102 54.9
BcaB05g23688 Brassica carinata HOM05D003686 ORTHO05D004322 1.9e-17 94.0 109 56.0
BcaB05g23689 Brassica carinata HOM05D003686 ORTHO05D004322 1.9e-17 94.0 109 56.0
ECA247G2101 Erigeron canadensis HOM05D003686 ORTHO05D004322 1.9e-17 94.0 111 53.2
Nitab4.5_0004238g0080 Nicotiana tabacum HOM05D003686 ORTHO05D004322 2.5e-17 93.6 152 45.4
CSS0048633 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 3.3e-17 93.2 210 40.5
Sopen01g029780 Solanum pennellii HOM05D003686 ORTHO05D004322 3.3e-17 93.2 173 45.1
CARHR251560 Cardamine hirsuta HOM05D003686 ORTHO05D004322 5.6e-17 92.4 116 54.3
Carub.0006s3393 Capsella rubella HOM05D003686 ORTHO05D004322 7.4e-17 92.0 54 81.5
HanXRQChr01g0002781 Helianthus annuus HOM05D003686 ORTHO05D004322 9.6e-17 91.7 119 56.3
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 9.6e-17 91.7 102 55.9
Zm00001eb203990 Zea mays HOM05D003686 ORTHO05D004322 9.6e-17 91.7 132 56.1
Dinv11293 Davidia involucrata HOM05D003686 ORTHO05D004322 1.6e-16 90.9 209 35.9
HanXRQChr11g0330151 Helianthus annuus HOM05D003686 ORTHO05D004322 2.1e-16 90.5 133 55.6
Lj5g0005016 Lotus japonicus HOM05D003686 ORTHO05D004322 2.1e-16 90.5 198 39.9
Psat3g024960 Pisum sativum HOM05D003686 ORTHO05D004322 2.1e-16 90.5 113 51.3
BraA02t07500Z Brassica rapa HOM05D003686 ORTHO05D004322 3.6e-16 89.7 137 49.6
Migut.N02118 Erythranthe guttata HOM05D003686 ORTHO05D004322 4.8e-16 89.4 100 57.0
Migut.O00643 Erythranthe guttata HOM05D003686 ORTHO05D004322 4.8e-16 89.4 100 57.0
A02p25120 Brassica napus HOM05D003686 ORTHO05D004322 6.2e-16 89.0 114 51.8
Dinv11297 Davidia involucrata HOM05D003686 ORTHO05D004322 8.1e-16 88.6 266 32.7
Cc01_g20160 Coffea canephora HOM05D003686 ORTHO05D004322 1.4e-15 87.8 159 45.9
BcaC03g16209 Brassica carinata HOM05D003686 ORTHO05D004322 3.1e-15 86.7 104 52.9
SGA_v2.0_scaffold172G39059 Striga asiatica HOM05D003686 ORTHO05D004322 3.1e-15 86.7 150 44.7
PGSC0003DMG400022854 Solanum tuberosum HOM05D003686 ORTHO05D004322 4.0e-15 86.3 107 52.3
BolC2t10013H Brassica oleracea HOM05D003686 ORTHO05D004322 5.3e-15 85.9 156 42.9
AagrBONN_evm.TU.Sc2ySwM_228.930 Anthoceros agrestis HOM05D003686 ORTHO05D004322 2.0e-14 84.0 46 87.0
Pp3c4_170 Physcomitrium patens HOM05D003686 ORTHO05D004322 2.6e-14 83.6 117 50.4
Peaxi162Scf01364g00015 Petunia axillaris HOM05D003686 ORTHO05D004322 4.5e-14 82.8 107 49.5
Pp3c12_26180 Physcomitrium patens HOM05D003686 ORTHO05D004322 1.3e-13 81.3 119 45.4
Oeu022800.1 Olea europaea HOM05D003686 ORTHO05D004322 1.7e-13 80.9 61 68.9
Oeu022802.1 Olea europaea HOM05D003686 ORTHO05D004322 1.7e-13 80.9 61 68.9
SalBow6G6913 Salvia bowleyana HOM05D003686 ORTHO05D004322 2.9e-13 80.1 115 46.1
SalBow8G5349 Salvia bowleyana HOM05D003686 ORTHO05D004322 2.9e-13 80.1 115 46.1
HPP92_021468 Vanilla planifolia HOM05D003686 ORTHO05D004322 4.9e-13 79.3 45 84.4
COL.COLO4_34092 Corchorus olitorius HOM05D003686 ORTHO05D004322 8.4e-13 78.6 92 53.3
SGA_v2.0_scaffold89G27564 Striga asiatica HOM05D003686 ORTHO05D004322 8.4e-13 78.6 135 45.9
MSTRG.12592 Avicennia marina HOM05D003686 ORTHO05D004322 1.1e-12 78.2 61 67.2
vmacro14959 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 1.4e-12 77.8 133 42.1
Peaxi162Scf01067g00002 Petunia axillaris HOM05D003686 ORTHO05D004322 4.2e-12 76.3 106 49.1
Psat3g182400 Pisum sativum HOM05D003686 ORTHO05D004322 1.2e-11 74.7 46 80.4
Psat0s3642g0040 Pisum sativum HOM05D000068 ORTHO05D025728 1.6e-11 74.3 46 82.6
Duzib211G0369 Durio zibethinus HOM05D003686 ORTHO05D004322 1.1e-09 68.2 82 54.9
vmacro14957 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 1.1e-09 68.2 136 39.7
unitig_22.g6331 Utricularia gibba HOM05D003686 ORTHO05D004322 6.2e-08 62.4 106 45.3


User provided reference genes

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