Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund00318 Selenicereus undatus HOM05D006129 ORTHO05D007446 1.3e-260 902.5 467 100.0
Sc08g0000140 Simmondsia chinensis HOM05D006129 ORTHO05D007446 4.3e-174 615.1 412 72.8
QL11p038411 Quercus lobata HOM05D006129 ORTHO05D007446 9.6e-166 587.4 432 66.9
EL10Ac9g21818 Beta vulgaris HOM05D006129 ORTHO05D007446 2.7e-160 569.3 478 62.8
GSVIVG01031785001 Vitis vinifera HOM05D006129 ORTHO05D007446 3.9e-159 565.5 427 64.6
Haze_01881 Corylus avellana HOM05D006129 ORTHO05D007446 6.6e-159 564.7 413 66.1
Dinv23594 Davidia involucrata HOM05D006129 ORTHO05D007446 6.6e-159 564.7 425 65.4
FAN27G0179 Fragaria x ananassa HOM05D006129 ORTHO05D007446 6.6e-159 564.7 409 66.7
RcHm_v2.0_Chr6g0259211 Rosa chinensis HOM05D006129 ORTHO05D007446 6.6e-159 564.7 418 65.1
Dinv42121 Davidia involucrata HOM05D006129 ORTHO05D007446 8.7e-159 564.3 430 65.3
CSS0025307 Camellia sinensis var. sinensis HOM05D006129 ORTHO05D007446 1.9e-158 563.1 414 65.2
CANSAT25G2181 Cannabis sativa HOM05D006129 ORTHO05D007446 1.9e-158 563.1 412 65.0
CSS0048591 Camellia sinensis var. sinensis HOM05D006129 ORTHO05D007446 2.5e-158 562.8 414 65.2
Cfa005424 Carpinus fangiana HOM05D006129 ORTHO05D007446 2.5e-158 562.8 413 65.6
CiPaw.05G055300 Carya illinoinensis HOM05D006129 ORTHO05D007446 1.3e-157 560.5 407 66.6
FvH4_2g06900 Fragaria vesca HOM05D006129 ORTHO05D007446 1.3e-157 560.5 404 66.3
FAN15G2181 Fragaria x ananassa HOM05D006129 ORTHO05D007446 6.2e-157 558.1 383 68.9
FAN24G2628 Fragaria x ananassa HOM05D006129 ORTHO05D007446 4.0e-156 555.4 404 65.8
TAR371G0476 Trochodendron aralioides HOM05D006129 ORTHO05D007446 4.0e-156 555.4 416 65.1
MD10G1089000 Malus domestica HOM05D006129 ORTHO05D007446 2.9e-154 549.3 426 63.6
vmacro02172 Vaccinium macrocarpon HOM05D006129 ORTHO05D007446 2.9e-154 549.3 420 63.1
Cpa.g.sc62.53 Carica papaya HOM05D006129 ORTHO05D007446 4.9e-154 548.5 386 66.8
AUR62011424 Chenopodium quinoa HOM05D006129 ORTHO05D007446 4.9e-154 548.5 477 60.6
AUR62016636 Chenopodium quinoa HOM05D006129 ORTHO05D007446 8.4e-154 547.7 418 65.6
PGR042G1055 Punica granatum HOM05D006129 ORTHO05D007446 1.4e-153 547.0 419 63.5
TWI31G0609 Tripterygium wilfordii HOM05D006129 ORTHO05D007446 7.1e-153 544.7 403 64.8
Lj5P206T15 Lonicera japonica HOM05D006129 ORTHO05D007446 1.2e-152 543.9 431 61.9
TWI79G0519 Tripterygium wilfordii HOM05D006129 ORTHO05D007446 1.2e-152 543.9 359 70.5
Ah.01g006750 Amaranthus hybridus HOM05D006129 ORTHO05D007446 1.6e-152 543.5 480 58.5
Atru.BG.82.p Acer truncatum HOM05D006129 ORTHO05D007446 1.0e-151 540.8 369 67.8
Nn4g23272 Nelumbo nucifera HOM05D006129 ORTHO05D007446 1.0e-151 540.8 433 63.3
Manes.17G094600 Manihot esculenta HOM05D006129 ORTHO05D007446 1.8e-151 540.0 387 64.1
COL.COLO4_11724 Corchorus olitorius HOM05D006129 ORTHO05D007446 5.1e-151 538.5 379 66.8
Rhsim11G0169300 Rhododendron simsii HOM05D006129 ORTHO05D007446 8.7e-151 537.7 410 62.9
Duzib248G0151 Durio zibethinus HOM05D006129 ORTHO05D007446 1.5e-150 537.0 429 61.8
Ciclev10027854m.g Citrus clementina HOM05D006129 ORTHO05D007446 3.3e-150 535.8 427 60.4
Thecc.02G095400 Theobroma cacao HOM05D006129 ORTHO05D007446 3.7e-149 532.3 427 60.4
Oeu057674.1 Olea europaea HOM05D006129 ORTHO05D007446 4.0e-148 528.9 411 61.3
Lalb_Chr10g0095451 Lupinus albus HOM05D006129 ORTHO05D007446 5.3e-148 528.5 399 63.4
Sed0004701 Sechium edule HOM05D006129 ORTHO05D007446 2.2e-146 523.1 413 62.2
ClCG07G001810 Citrullus lanatus HOM05D006129 ORTHO05D007446 4.2e-145 518.8 414 62.3
Lj2g0010354 Lotus japonicus HOM05D006129 ORTHO05D007446 9.3e-145 517.7 391 62.9
Potri.009G106800 Populus trichocarpa HOM05D006129 ORTHO05D007446 2.7e-144 516.2 429 59.4
CARHR106180 Cardamine hirsuta HOM05D006129 ORTHO05D007446 1.3e-143 513.8 418 59.3
Prupe.8G116000 Prunus persica HOM05D006129 ORTHO05D007446 1.3e-143 513.8 405 62.5
ECA234G4125 Erigeron canadensis HOM05D006129 ORTHO05D007446 2.3e-143 513.1 422 57.8
Nitab4.5_0007303g0010 Nicotiana tabacum HOM05D006129 ORTHO05D007446 3.9e-143 512.3 375 62.9
MELO3C026699.2 Cucumis melo HOM05D006129 ORTHO05D007446 5.1e-143 511.9 413 61.7
Glyma.20G009700 Glycine max HOM05D006129 ORTHO05D007446 5.1e-143 511.9 358 65.4
Gohir.D01G006000 Gossypium hirsutum HOM05D006129 ORTHO05D007446 5.1e-143 511.9 428 58.4
Gorai.002G007000 Gossypium raimondii HOM05D006129 ORTHO05D007446 5.1e-143 511.9 425 58.6
Solyc11g066850.3 Solanum lycopersicum HOM05D006129 ORTHO05D007446 5.1e-143 511.9 419 57.5
DCAR_003623 Daucus carota HOM05D006129 ORTHO05D007446 6.7e-143 511.5 418 60.8
Aqoxy3G03484 Aquilegia oxysepala HOM05D006129 ORTHO05D007446 1.5e-142 510.4 409 62.1
Carub.0003s2972 Capsella rubella HOM05D006129 ORTHO05D007446 3.3e-142 509.2 423 57.7
Medtr1g026035 Medicago truncatula HOM05D006129 ORTHO05D007446 3.3e-142 509.2 413 58.6
AL3G47590 Arabidopsis lyrata HOM05D006129 ORTHO05D007446 4.3e-142 508.8 421 58.0
Eucgr.L01320 Eucalyptus grandis HOM05D006129 ORTHO05D007446 5.7e-142 508.4 419 60.1
Sabra09G0081600 Salix brachista HOM05D006129 ORTHO05D007446 1.3e-141 507.3 361 64.3
VMungo0464G0688 Vigna mungo HOM05D006129 ORTHO05D007446 1.6e-141 506.9 370 63.0
Migut.B00306 Erythranthe guttata HOM05D006129 ORTHO05D007446 2.1e-141 506.5 384 60.9
Nitab4.5_0001453g0090 Nicotiana tabacum HOM05D006129 ORTHO05D007446 3.7e-141 505.8 465 53.5
Glyma.07G178800 Glycine max HOM05D006129 ORTHO05D007446 4.8e-141 505.4 370 62.7
Eucgr.L00820 Eucalyptus grandis HOM05D006129 ORTHO05D007446 6.2e-141 505.0 405 61.2
CsaV3_3G028800 Cucumis sativus L. HOM05D006129 ORTHO05D007446 1.1e-140 504.2 413 61.0
Thhalv10022548m.g Eutrema salsugineum HOM05D006129 ORTHO05D007446 1.4e-140 503.8 420 57.4
Sp3g29130 Schrenkiella parvula HOM05D006129 ORTHO05D007446 1.4e-140 503.8 427 55.5
BcaC06g36090 Brassica carinata HOM05D006129 ORTHO05D007446 2.4e-140 503.1 414 56.8
C07p07940 Brassica napus HOM05D006129 ORTHO05D007446 2.4e-140 503.1 414 56.8
BolC7t41212H Brassica oleracea HOM05D006129 ORTHO05D007446 2.4e-140 503.1 414 56.8
AT2G15820 Arabidopsis thaliana HOM05D006129 ORTHO05D007446 3.1e-140 502.7 422 56.6
Gohir.A01G005900 Gossypium hirsutum HOM05D006129 ORTHO05D007446 4.1e-140 502.3 426 57.5
BraA07t28289Z Brassica rapa HOM05D006129 ORTHO05D007446 1.5e-139 500.4 412 56.8
Ca_13480_v3 Cicer arietinum L. HOM05D006129 ORTHO05D007446 2.0e-139 500.0 366 63.4
A07p04960 Brassica napus HOM05D006129 ORTHO05D007446 2.6e-139 499.6 412 56.8
TPR.G26422 Trifolium pratense HOM05D006129 ORTHO05D007446 3.4e-139 499.2 376 62.0
Lsat_1_v5_gn_5_113460 Lactuca sativa HOM05D006129 ORTHO05D007446 5.8e-139 498.4 425 56.9
CDE04G1903 Ceratophyllum demersum HOM05D006129 ORTHO05D007446 1.3e-138 497.3 377 62.6
HanXRQChr10g0303221 Helianthus annuus HOM05D006129 ORTHO05D007446 1.7e-138 496.9 436 57.1
MSTRG.20134 Avicennia marina HOM05D006129 ORTHO05D007446 2.9e-138 496.1 421 58.7
Peaxi162Scf00789g00530 Petunia axillaris HOM05D006129 ORTHO05D007446 3.8e-138 495.7 423 56.5
THA.LOC104807348 Tarenaya hassleriana HOM05D006129 ORTHO05D007446 3.8e-138 495.7 422 56.2
BcaB03g16332 Brassica carinata HOM05D006129 ORTHO05D007446 5.0e-138 495.4 414 56.0
CAN.G644.34 Capsicum annuum HOM05D006129 ORTHO05D007446 5.0e-138 495.4 368 62.0
Aa31LG8G13380 Aethionema arabicum HOM05D006129 ORTHO05D007446 1.9e-137 493.4 421 56.1
Phvul.002G308800 Phaseolus vulgaris HOM05D006129 ORTHO05D007446 5.5e-137 491.9 370 61.6
HPP92_022045 Vanilla planifolia HOM05D006129 ORTHO05D007446 8.2e-133 478.0 361 59.8
ATR0665G475 Amborella trichopoda HOM05D006129 ORTHO05D007446 3.1e-132 476.1 359 63.2
unitig_744.g24241 Utricularia gibba HOM05D006129 ORTHO05D007446 2.6e-131 473.0 409 55.3
arahy.Tifrunner.gnm1.ann1.769PPM Arachis hypogaea HOM05D006129 ORTHO05D007446 3.8e-130 469.2 368 60.1
Zm00001eb251880 Zea mays HOM05D006129 ORTHO05D007446 3.2e-129 466.1 407 55.5
Os02g0702000 Oryza sativa ssp. japonica HOM05D006129 ORTHO05D007446 4.3e-126 455.7 360 58.6
SGA_v2.0_scaffold58G20604 Striga asiatica HOM05D006129 ORTHO05D007446 4.3e-126 455.7 420 53.1
Actinidia12976 Actinidia chinensis HOM05D006129 ORTHO05D007446 7.7e-123 444.9 429 53.8
PGSC0003DMG400026525 Solanum tuberosum HOM05D006129 ORTHO05D007446 2.2e-122 443.4 325 61.8
Sopen11g026560 Solanum pennellii HOM05D006129 ORTHO05D007446 1.4e-121 440.7 325 61.2
FAN20G2787 Fragaria x ananassa HOM05D006129 ORTHO05D007446 5.0e-114 415.6 287 69.0
TAR371G0992 Trochodendron aralioides HOM05D006129 ORTHO05D007446 2.8e-109 399.8 355 56.9
Atru.chr5.2887 Acer truncatum HOM05D006129 ORTHO05D007446 3.7e-101 372.9 406 48.0
SEGI_31419 Sequoiadendron giganteum HOM05D006129 ORTHO05D007446 1.7e-98 364.0 356 50.3
Psat6g001360 Pisum sativum HOM05D006129 ORTHO05D007446 4.7e-96 355.9 241 66.0
TAR371G0058 Trochodendron aralioides HOM05D006129 ORTHO05D007446 1.1e-92 344.7 315 56.5
Medtr0381s0010 Medicago truncatula HOM05D006129 ORTHO05D007446 6.8e-87 325.5 286 55.2
QL11p038542 Quercus lobata HOM05D006129 ORTHO05D007446 6.8e-87 325.5 254 63.8
Atru.chr5.2881 Acer truncatum HOM05D006129 ORTHO05D007446 9.2e-84 315.1 309 51.8
Atru.chr5.2823 Acer truncatum HOM05D006129 ORTHO05D007446 3.9e-82 309.7 357 47.9
Atru.chr5.2826 Acer truncatum HOM05D006129 ORTHO05D007446 3.6e-80 303.1 352 50.6
TAR629G1168 Trochodendron aralioides HOM05D006129 ORTHO05D007446 3.2e-76 290.0 212 63.2
Eucgr.G01504 Eucalyptus grandis HOM05D006129 ORTHO05D007446 6.6e-74 282.3 428 40.7
TAR629G1760 Trochodendron aralioides HOM05D006129 ORTHO05D007446 8.9e-55 218.8 193 57.5
Cc02_g18430 Coffea canephora HOM05D006129 ORTHO05D007446 6.6e-42 176.0 146 61.6
Pp3c25_10050 Physcomitrium patens HOM05D006129 ORTHO05D007446 2.5e-41 174.1 349 31.8
arahy.Tifrunner.gnm1.ann1.SUMB0F Arachis hypogaea HOM05D006129 ORTHO05D007446 3.6e-40 170.2 115 66.1
AagrBONN_evm.TU.Sc2ySwM_344.1734 Anthoceros agrestis HOM05D006129 ORTHO05D007446 1.4e-36 158.3 347 27.7
SMO356G0628 Selaginella moellendorffii HOM05D006129 ORTHO05D007446 1.2e-35 155.2 372 27.2
Cc02_g18440 Coffea canephora HOM05D006129 ORTHO05D007446 8.7e-34 149.1 133 54.9
Mapoly0036s0055 Marchantia polymorpha HOM05D006129 ORTHO05D007446 1.3e-32 145.2 279 30.8
Pp3c16_23700 Physcomitrium patens HOM05D006129 ORTHO05D007446 3.7e-32 143.7 244 35.7
AagrBONN_evm.TU.Sc2ySwM_344.5085 Anthoceros agrestis HOM05D006129 ORTHO05D007446 3.1e-31 140.6 227 33.9
QL11p038477 Quercus lobata HOM05D006129 ORTHO05D007446 1.2e-22 112.1 66 71.2
Atru.chr5.2820 Acer truncatum HOM05D006129 ORTHO05D007446 1.2e-14 85.5 76 55.3
RcHm_v2.0_Chr6g0302241 Rosa chinensis HOM05D006129 ORTHO05D007446 1.1e-12 79.0 61 55.7
RcHm_v2.0_Chr1g0376021 Rosa chinensis HOM05D006129 ORTHO05D007446 2.3e-10 71.2 51 60.8
RcHm_v2.0_Chr2g0152801 Rosa chinensis HOM05D006129 ORTHO05D007446 5.1e-10 70.1 53 62.3
Atru.chr5.2882 Acer truncatum HOM05D006129 ORTHO05D007446 1.5e-09 68.6 72 41.7


User provided reference genes

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