Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0470091 Helianthus annuus HOM05D003850 ORTHO05D004515 2.3e-216 755.7 519 100.0
ECA233G3046 Erigeron canadensis HOM05D003850 ORTHO05D004515 1.5e-175 620.2 524 84.5
MSTRG.7170 Avicennia marina HOM05D003850 ORTHO05D004515 8.7e-160 567.8 527 71.9
Potri.006G009100 Populus trichocarpa HOM05D003850 ORTHO05D004515 4.1e-157 558.9 527 71.9
CSS0032808 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 6.5e-155 551.6 531 67.2
QL05p069776 Quercus lobata HOM05D003850 ORTHO05D004515 2.5e-154 549.7 532 68.4
CANSAT56G0590 Cannabis sativa HOM05D003850 ORTHO05D004515 5.5e-154 548.5 527 67.6
Atru.chr1.2461 Acer truncatum HOM05D003850 ORTHO05D004515 6.1e-153 545.0 528 68.4
Nn1g03331 Nelumbo nucifera HOM05D003850 ORTHO05D004515 7.9e-153 544.7 528 69.3
CSS0007684 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 5.7e-151 538.5 532 67.9
TAR624G0821 Trochodendron aralioides HOM05D003850 ORTHO05D004515 5.7e-151 538.5 529 68.1
Ciclev10014841m.g Citrus clementina HOM05D003850 ORTHO05D004515 1.3e-150 537.3 526 69.0
Sopen11g006940 Solanum pennellii HOM05D003850 ORTHO05D004515 3.7e-150 535.8 526 67.5
Nitab4.5_0001198g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 8.2e-150 534.6 518 69.1
Migut.M01390 Erythranthe guttata HOM05D003850 ORTHO05D004515 1.1e-149 534.3 525 65.9
arahy.Tifrunner.gnm1.ann1.C17RPB Arachis hypogaea HOM05D003850 ORTHO05D004515 1.4e-149 533.9 528 63.8
RhsimUnG0025700 Rhododendron simsii HOM05D003850 ORTHO05D004515 1.3e-147 527.3 562 68.3
RhsimUnG0028500 Rhododendron simsii HOM05D003850 ORTHO05D004515 1.3e-147 527.3 562 68.3
Cc09_g00920 Coffea canephora HOM05D003850 ORTHO05D004515 1.7e-147 526.9 527 70.6
CiPaw.09G102000 Carya illinoinensis HOM05D003850 ORTHO05D004515 2.9e-147 526.2 526 68.1
THA.LOC104812992 Tarenaya hassleriana HOM05D003850 ORTHO05D004515 2.9e-147 526.2 535 66.4
SalBow8G5272 Salvia bowleyana HOM05D003850 ORTHO05D004515 8.5e-147 524.6 539 68.3
PGSC0003DMG400013344 Solanum tuberosum HOM05D003850 ORTHO05D004515 1.2e-145 520.8 516 68.0
arahy.Tifrunner.gnm1.ann1.IIR6TV Arachis hypogaea HOM05D003850 ORTHO05D004515 1.6e-145 520.4 530 63.2
GSVIVG01003352001 Vitis vinifera HOM05D003850 ORTHO05D004515 1.6e-145 520.4 529 71.1
Aqoxy1G04110 Aquilegia oxysepala HOM05D003850 ORTHO05D004515 2.7e-145 519.6 524 62.0
Nn1g07354 Nelumbo nucifera HOM05D003850 ORTHO05D004515 4.6e-145 518.8 524 68.7
Glyma.09G009900 Glycine max HOM05D003850 ORTHO05D004515 7.9e-145 518.1 524 63.9
Lsat_1_v5_gn_7_13561 Lactuca sativa HOM05D003850 ORTHO05D004515 1.0e-144 517.7 501 75.0
Solyc11g012150.3 Solanum lycopersicum HOM05D003850 ORTHO05D004515 1.0e-144 517.7 516 67.2
TAR629G2665 Trochodendron aralioides HOM05D003850 ORTHO05D004515 1.5e-143 513.8 526 68.1
Eucgr.E03951 Eucalyptus grandis HOM05D003850 ORTHO05D004515 2.0e-143 513.5 532 69.2
Ca_00718_v3 Cicer arietinum L. HOM05D003850 ORTHO05D004515 7.4e-143 511.5 530 61.9
Oeu002760.2 Olea europaea HOM05D003850 ORTHO05D004515 9.7e-143 511.1 562 65.5
Duzib160G0220 Durio zibethinus HOM05D003850 ORTHO05D004515 1.7e-142 510.4 542 64.2
VMungo1215G3075 Vigna mungo HOM05D003850 ORTHO05D004515 8.2e-142 508.1 529 68.1
Peaxi162Scf00558g00516 Petunia axillaris HOM05D003850 ORTHO05D004515 6.9e-141 505.0 496 70.0
PSO210G4264 Papaver somniferum HOM05D003850 ORTHO05D004515 1.2e-140 504.2 530 65.3
Sed0003006 Sechium edule HOM05D003850 ORTHO05D004515 1.5e-140 503.8 523 64.4
Thecc.06G232700 Theobroma cacao HOM05D003850 ORTHO05D004515 2.6e-140 503.1 543 64.3
Gohir.A06G153120 Gossypium hirsutum HOM05D003850 ORTHO05D004515 3.4e-140 502.7 540 71.5
VMungo0540G1287 Vigna mungo HOM05D003850 ORTHO05D004515 5.9e-140 501.9 531 62.5
SGA_v2.0_scaffold4G01878 Striga asiatica HOM05D003850 ORTHO05D004515 1.7e-139 500.4 512 69.3
Nitab4.5_0000143g0310 Nicotiana tabacum HOM05D003850 ORTHO05D004515 2.2e-139 500.0 517 67.1
Gorai.010G186300 Gossypium raimondii HOM05D003850 ORTHO05D004515 2.9e-139 499.6 540 71.1
Prupe.4G011300 Prunus persica HOM05D003850 ORTHO05D004515 1.9e-138 496.9 525 64.8
Phvul.006G143600 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 2.5e-138 496.5 532 61.7
Sabra06G0006900 Salix brachista HOM05D003850 ORTHO05D004515 3.2e-138 496.1 527 64.3
Phvul.003G083500 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 1.6e-137 493.8 530 67.4
Gohir.D06G159600 Gossypium hirsutum HOM05D003850 ORTHO05D004515 6.1e-137 491.9 540 70.9
Potri.016G015100 Populus trichocarpa HOM05D003850 ORTHO05D004515 1.0e-136 491.1 534 64.0
arahy.Tifrunner.gnm1.ann1.97WSNQ Arachis hypogaea HOM05D003850 ORTHO05D004515 3.0e-136 489.6 537 64.8
Lalb_Chr20g0119201 Lupinus albus HOM05D003850 ORTHO05D004515 3.0e-136 489.6 527 62.2
vmacro15772 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 5.1e-136 488.8 540 68.1
PGR102G0753 Punica granatum HOM05D003850 ORTHO05D004515 1.1e-135 487.6 528 65.9
CsaV3_3G028740 Cucumis sativus L. HOM05D003850 ORTHO05D004515 1.5e-135 487.3 523 64.1
TPR.G3343 Trifolium pratense HOM05D003850 ORTHO05D004515 1.5e-135 487.3 553 63.1
arahy.Tifrunner.gnm1.ann1.0C9QHL Arachis hypogaea HOM05D003850 ORTHO05D004515 2.0e-135 486.9 538 65.4
CiPaw.10G077600 Carya illinoinensis HOM05D003850 ORTHO05D004515 2.0e-135 486.9 508 60.2
MBI16_g42266_MAGBIO Magnolia biondii HOM05D003850 ORTHO05D004515 6.3e-134 481.9 528 65.5
AL6G47570 Arabidopsis lyrata HOM05D003850 ORTHO05D004515 9.1e-133 478.0 537 68.0
Medtr2g025590 Medicago truncatula HOM05D003850 ORTHO05D004515 9.1e-133 478.0 531 65.7
Manes.07G088900 Manihot esculenta HOM05D003850 ORTHO05D004515 1.6e-132 477.2 520 64.0
PSO302G0165 Papaver somniferum HOM05D003850 ORTHO05D004515 2.0e-132 476.9 528 65.9
Glyma.15G114200 Glycine max HOM05D003850 ORTHO05D004515 4.5e-132 475.7 525 61.1
COL.COLO4_31876 Corchorus olitorius HOM05D003850 ORTHO05D004515 1.7e-131 473.8 541 61.6
AT4G12610 Arabidopsis thaliana HOM05D003850 ORTHO05D004515 5.0e-131 472.2 538 68.2
Lj2A262G45 Lonicera japonica HOM05D003850 ORTHO05D004515 7.2e-130 468.4 493 68.4
ClCG07G001740 Citrullus lanatus HOM05D003850 ORTHO05D004515 2.7e-129 466.5 524 62.4
SEGI_18521 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 8.0e-129 464.9 537 61.6
ATR0751G086 Amborella trichopoda HOM05D003850 ORTHO05D004515 1.1e-127 461.1 537 62.0
Carub.0006s3188 Capsella rubella HOM05D003850 ORTHO05D004515 1.5e-127 460.7 536 68.3
Aa31LG9G10040 Aethionema arabicum HOM05D003850 ORTHO05D004515 9.7e-127 458.0 556 61.7
Sabra16G0017100 Salix brachista HOM05D003850 ORTHO05D004515 2.4e-125 453.4 559 57.4
unitig_748.g7103 Utricularia gibba HOM05D003850 ORTHO05D004515 2.9e-123 446.4 521 60.5
Actinidia39269 Actinidia chinensis HOM05D003850 ORTHO05D004515 5.0e-123 445.7 331 77.3
Cfa000110 Carpinus fangiana HOM05D003850 ORTHO05D004515 9.4e-122 441.4 530 63.0
HPP92_001629 Vanilla planifolia HOM05D003850 ORTHO05D004515 2.7e-121 439.9 516 53.7
MD05G1357300 Malus domestica HOM05D003850 ORTHO05D004515 6.1e-121 438.7 535 60.6
C03p36090 Brassica napus HOM05D003850 ORTHO05D004515 4.0e-120 436.0 533 63.6
A03p29830 Brassica napus HOM05D003850 ORTHO05D004515 1.2e-119 434.5 533 64.2
BcaC01g04577 Brassica carinata HOM05D003850 ORTHO05D004515 2.0e-119 433.7 535 63.4
BolC3t15918H Brassica oleracea HOM05D003850 ORTHO05D004515 2.0e-119 433.7 535 63.4
BraA03t12173Z Brassica rapa HOM05D003850 ORTHO05D004515 2.0e-119 433.7 535 63.7
Haze_08659 Corylus avellana HOM05D003850 ORTHO05D004515 2.0e-119 433.7 571 57.6
CAN.G1186.28 Capsicum annuum HOM05D003850 ORTHO05D004515 4.4e-119 432.6 529 60.1
MD10G1331000 Malus domestica HOM05D003850 ORTHO05D004515 7.5e-119 431.8 525 62.1
Sabra16G0000900 Salix brachista HOM05D003850 ORTHO05D004515 8.3e-118 428.3 537 52.9
Lj6g0013016 Lotus japonicus HOM05D003850 ORTHO05D004515 1.8e-117 427.2 533 63.2
Thhalv10028564m.g Eutrema salsugineum HOM05D003850 ORTHO05D004515 3.1e-117 426.4 540 65.2
BcaB01g02623 Brassica carinata HOM05D003850 ORTHO05D004515 1.2e-116 424.5 534 65.2
BolC9t56221H Brassica oleracea HOM05D003850 ORTHO05D004515 1.2e-116 424.5 526 61.6
FvH4_3g01042 Fragaria vesca HOM05D003850 ORTHO05D004515 3.5e-116 422.9 544 56.2
Lj4g0025543 Lotus japonicus HOM05D003850 ORTHO05D004515 3.5e-116 422.9 532 58.3
Cpa.g.sc75.120 Carica papaya HOM05D003850 ORTHO05D004515 3.8e-115 419.5 530 63.8
SHI24464 Sapria himalayana HOM05D003850 ORTHO05D004515 8.5e-115 418.3 519 54.3
vmacro03646 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 8.5e-115 418.3 536 52.2
BcaB01g01757 Brassica carinata HOM05D003850 ORTHO05D004515 1.1e-114 417.9 525 58.5
CARHR253560 Cardamine hirsuta HOM05D003850 ORTHO05D004515 2.5e-114 416.8 535 63.2
TWI63G0294 Tripterygium wilfordii HOM05D003850 ORTHO05D004515 1.2e-113 414.5 500 63.4
FAN25G3770 Fragaria x ananassa HOM05D003850 ORTHO05D004515 8.0e-113 411.8 570 51.1
Sp6g04900 Schrenkiella parvula HOM05D003850 ORTHO05D004515 1.8e-112 410.6 534 63.7
AUR62021872 Chenopodium quinoa HOM05D003850 ORTHO05D004515 4.0e-112 409.5 531 50.5
Zm00001eb224360 Zea mays HOM05D003850 ORTHO05D004515 5.7e-111 405.6 498 56.6
FAN21G1422 Fragaria x ananassa HOM05D003850 ORTHO05D004515 6.3e-110 402.1 561 54.2
MELO3C012788.2 Cucumis melo HOM05D003850 ORTHO05D004515 8.3e-110 401.7 474 62.9
PSO339G3925 Papaver somniferum HOM05D003850 ORTHO05D004515 1.4e-109 401.0 527 59.0
BraA09t38246Z Brassica rapa HOM05D003850 ORTHO05D004515 7.7e-108 395.2 532 59.0
Psat1g176560 Pisum sativum HOM05D003850 ORTHO05D004515 1.7e-107 394.0 479 64.5
Oeu044421.3 Olea europaea HOM05D003850 ORTHO05D004515 8.6e-107 391.7 820 40.2
A09p26740 Brassica napus HOM05D003850 ORTHO05D004515 2.3e-104 383.6 523 59.5
BcaC04g21251 Brassica carinata HOM05D003850 ORTHO05D004515 5.7e-103 379.0 517 59.8
C09p33830 Brassica napus HOM05D003850 ORTHO05D004515 5.7e-103 379.0 517 59.8
Hund23984 Selenicereus undatus HOM05D003850 ORTHO05D004515 2.9e-102 376.7 530 59.6
CDE04G2591 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 1.4e-101 374.4 528 58.5
RcHm_v2.0_Chr5g0001581 Rosa chinensis HOM05D003850 ORTHO05D004515 2.4e-101 373.6 544 52.4
RhsimUnG0109100 Rhododendron simsii HOM05D003850 ORTHO05D004515 3.2e-101 373.2 499 53.1
Lj8A171G42 Lonicera japonica HOM05D003850 ORTHO05D004515 4.1e-101 372.9 531 47.8
DCAR_025996 Daucus carota HOM05D003850 ORTHO05D004515 2.0e-95 354.0 457 62.8
Rhsim13G0146600 Rhododendron simsii HOM05D003850 ORTHO05D004515 1.1e-93 348.2 553 47.9
EL10Ac8g20176 Beta vulgaris HOM05D003850 ORTHO05D004515 5.6e-90 335.9 525 56.6
CDE06G1774 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 4.7e-89 332.8 298 63.4
Mapoly0105s0015 Marchantia polymorpha HOM05D003850 ORTHO05D004515 6.2e-89 332.4 536 49.3
Duzib235G1223 Durio zibethinus HOM05D003850 ORTHO05D004515 3.1e-88 330.1 425 61.4
Pp3c3_2280 Physcomitrium patens HOM05D003850 ORTHO05D004515 4.6e-84 316.2 540 47.6
RcHm_v2.0_Chr5g0007791 Rosa chinensis HOM05D003850 ORTHO05D004515 2.8e-81 307.0 530 47.2
Zm00001eb398520 Zea mays HOM05D003850 ORTHO05D004515 3.4e-79 300.1 521 40.7
FAN11G3915 Fragaria x ananassa HOM05D003850 ORTHO05D004515 4.1e-77 293.1 527 42.5
FvH4_3g04782 Fragaria vesca HOM05D003850 ORTHO05D004515 5.4e-77 292.7 527 42.5
FAN16G3024 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.6e-76 291.2 527 42.3
FAN03G2951 Fragaria x ananassa HOM05D003850 ORTHO05D004515 2.7e-76 290.4 519 43.0
QL09p006300 Quercus lobata HOM05D003850 ORTHO05D004515 3.9e-75 286.6 380 62.4
AUR62012783 Chenopodium quinoa HOM05D003850 ORTHO05D004515 6.6e-75 285.8 437 47.6
AagrBONN_evm.TU.Sc2ySwM_228.4136 Anthoceros agrestis HOM05D003850 ORTHO05D004515 1.5e-74 284.6 334 56.6
FAN21G1676 Fragaria x ananassa HOM05D003850 ORTHO05D004515 5.6e-74 282.7 519 42.4
FvH4_2g22070 Fragaria vesca HOM05D003850 ORTHO05D004515 1.6e-73 281.2 533 40.2
Dinv07398 Davidia involucrata HOM05D003850 ORTHO05D004515 2.0e-71 274.2 333 69.4
FAN24G0125 Fragaria x ananassa HOM05D003850 ORTHO05D008045 2.6e-71 273.9 533 40.2
TPR.G34491 Trifolium pratense HOM05D003850 ORTHO05D004515 1.9e-69 267.7 168 76.2
Medtr2g025620 Medicago truncatula HOM05D003850 ORTHO05D004515 1.2e-68 265.0 507 51.9
Peaxi162Scf00015g02110 Petunia axillaris HOM05D003850 ORTHO05D004515 8.7e-67 258.8 310 56.1
TPR.G13041 Trifolium pratense HOM05D003850 ORTHO05D004515 1.5e-66 258.1 374 64.4
SEGI_38016 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 1.1e-50 205.3 307 45.0
Sc17g0007710 Simmondsia chinensis HOM05D003850 ORTHO05D004515 1.3e-49 201.8 377 56.0
FAN25G2646 Fragaria x ananassa HOM05D003850 ORTHO05D004515 2.1e-49 201.1 511 35.0
HPP92_001646 Vanilla planifolia HOM05D003850 ORTHO05D004515 2.4e-48 197.6 222 56.3
Actinidia11880 Actinidia chinensis HOM05D003850 ORTHO05D004515 2.9e-46 190.7 310 47.1
Lsat_1_v5_gn_5_64561 Lactuca sativa HOM05D003952 ORTHO05D004515 1.3e-41 175.3 181 73.5
Gorai.002G145900 Gossypium raimondii HOM05D003850 ORTHO05D004515 1.2e-36 158.7 177 75.7
CBR_g38333 Chara braunii HOM05D000019 ORTHO05D000002 2.2e-33 147.9 250 42.4
HPP92_001645 Vanilla planifolia HOM05D003850 ORTHO05D004515 2.2e-22 111.3 73 71.2
RcHm_v2.0_Chr6g0288941 Rosa chinensis HOM05D003850 ORTHO05D004515 5.0e-22 110.2 264 36.0
Gohir.D01G119450 Gossypium hirsutum HOM05D003850 ORTHO05D004515 1.6e-20 105.1 102 68.6
Lsat_1_v5_gn_3_78300 Lactuca sativa HOM05D002115 ORTHO05D002263 5.2e-19 100.1 56 87.5
AagrBONN_evm.TU.Sc2ySwM_228.3786 Anthoceros agrestis HOM05D003850 ORTHO05D004515 6.7e-19 99.8 121 42.1
HPP92_001647 Vanilla planifolia HOM05D003850 ORTHO05D004515 1.4e-16 92.0 106 55.7
VMungo0720G0179 Vigna mungo HOM05D003850 ORTHO05D004515 2.0e-15 88.2 80 57.5
CDE06G0619 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 4.5e-15 87.0 222 44.1
TAR629G2548 Trochodendron aralioides HOM05D003850 ORTHO05D004515 4.5e-15 87.0 65 75.4
arahy.Tifrunner.gnm1.ann1.N7GRQP Arachis hypogaea HOM05D003850 ORTHO05D004515 7.7e-15 86.3 73 65.8
arahy.Tifrunner.gnm1.ann1.UE8YUV Arachis hypogaea HOM05D003850 ORTHO05D004515 7.7e-15 86.3 73 65.8
CAN.G1186.27 Capsicum annuum HOM05D001620 ORTHO05D005461 2.9e-14 84.3 58 65.5
Nitab4.5_0013082g0020 Nicotiana tabacum HOM05D003850 ORTHO05D004515 8.5e-14 82.8 68 64.7
PSO384G4333 Papaver somniferum HOM05D003850 ORTHO05D004515 1.5e-13 82.0 117 45.3
arahy.Tifrunner.gnm1.ann1.5H9H8Z Arachis hypogaea HOM05D003850 ORTHO05D004515 2.5e-13 81.3 118 52.5
arahy.Tifrunner.gnm1.ann1.4A53N1 Arachis hypogaea HOM05D003850 ORTHO05D004515 4.2e-13 80.5 85 58.8
PSO339G5270 Papaver somniferum HOM05D003850 ORTHO05D004515 1.2e-12 79.0 131 46.6
Nitab4.5_0006771g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 2.1e-12 78.2 69 63.8
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 1.4e-11 75.5 70 54.3
SEGI_29277 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 3.0e-11 74.3 132 43.9
AagrBONN_evm.TU.Sc2ySwM_228.3787 Anthoceros agrestis HOM05D003850 ORTHO05D004515 2.2e-09 68.2 250 31.2
arahy.Tifrunner.gnm1.ann1.GFC3N0 Arachis hypogaea HOM05D003850 ORTHO05D004515 4.8e-09 67.0 57 63.2
CARHR253550 Cardamine hirsuta HOM05D003850 ORTHO05D004515 5.3e-08 63.5 64 53.1
FAN21G0780 Fragaria x ananassa HOM05D003850 ORTHO05D004515 9.1e-08 62.8 209 35.4
Aa31LG9G10030 Aethionema arabicum HOM05D003850 ORTHO05D004515 1.2e-07 62.4 49 65.3


User provided reference genes

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