Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0303221 Helianthus annuus HOM05D006129 ORTHO05D007446 0.0e+00 1621.7 809 100.0
Lsat_1_v5_gn_5_113460 Lactuca sativa HOM05D006129 ORTHO05D007446 0.0e+00 1237.2 813 76.5
ECA234G4125 Erigeron canadensis HOM05D006129 ORTHO05D007446 0.0e+00 1218.4 781 76.8
Dinv42121 Davidia involucrata HOM05D006129 ORTHO05D007446 2.6e-288 995.3 812 63.7
GSVIVG01031785001 Vitis vinifera HOM05D006129 ORTHO05D007446 3.1e-281 971.8 795 61.8
Lj5P206T15 Lonicera japonica HOM05D006129 ORTHO05D007446 7.0e-281 970.7 809 61.8
CSS0048591 Camellia sinensis var. sinensis HOM05D006129 ORTHO05D007446 3.0e-276 955.3 801 61.2
CSS0025307 Camellia sinensis var. sinensis HOM05D006129 ORTHO05D007446 6.7e-276 954.1 801 61.2
Thecc.02G095400 Theobroma cacao HOM05D006129 ORTHO05D007446 1.2e-275 953.4 835 59.5
QL11p038411 Quercus lobata HOM05D006129 ORTHO05D007446 1.3e-274 949.9 769 61.9
Duzib248G0151 Durio zibethinus HOM05D006129 ORTHO05D007446 2.8e-274 948.7 833 60.1
Cpa.g.sc62.53 Carica papaya HOM05D006129 ORTHO05D007446 3.2e-270 935.3 843 58.0
COL.COLO4_11724 Corchorus olitorius HOM05D006129 ORTHO05D007446 1.6e-269 932.9 744 63.4
CiPaw.05G055300 Carya illinoinensis HOM05D006129 ORTHO05D007446 1.4e-268 929.9 811 59.7
Cfa005424 Carpinus fangiana HOM05D006129 ORTHO05D007446 3.0e-268 928.7 804 59.5
DCAR_003623 Daucus carota HOM05D006129 ORTHO05D007446 8.8e-268 927.2 784 59.9
Haze_01881 Corylus avellana HOM05D006129 ORTHO05D007446 4.4e-267 924.9 799 59.1
vmacro02172 Vaccinium macrocarpon HOM05D006129 ORTHO05D007446 1.2e-264 916.8 816 58.0
CANSAT25G2181 Cannabis sativa HOM05D006129 ORTHO05D007446 1.5e-262 909.8 813 57.7
Gohir.D01G006000 Gossypium hirsutum HOM05D006129 ORTHO05D007446 7.2e-262 907.5 809 58.2
Gorai.002G007000 Gossypium raimondii HOM05D006129 ORTHO05D007446 8.0e-261 904.0 808 58.0
TWI79G0519 Tripterygium wilfordii HOM05D006129 ORTHO05D007446 3.0e-260 902.1 788 58.8
Nn4g23272 Nelumbo nucifera HOM05D006129 ORTHO05D007446 6.8e-260 901.0 808 57.4
Gohir.A01G005900 Gossypium hirsutum HOM05D006129 ORTHO05D007446 1.5e-259 899.8 801 58.3
Atru.BG.82.p Acer truncatum HOM05D006129 ORTHO05D007446 5.7e-259 897.9 648 65.3
Dinv23594 Davidia involucrata HOM05D006129 ORTHO05D007446 1.3e-258 896.7 813 57.8
TWI31G0609 Tripterygium wilfordii HOM05D006129 ORTHO05D007446 3.7e-258 895.2 794 58.4
MD10G1089000 Malus domestica HOM05D006129 ORTHO05D007446 3.1e-257 892.1 805 56.4
Rhsim11G0169300 Rhododendron simsii HOM05D006129 ORTHO05D007446 1.2e-256 890.2 820 57.4
RcHm_v2.0_Chr6g0259211 Rosa chinensis HOM05D006129 ORTHO05D007446 2.7e-256 889.0 778 57.5
MELO3C026699.2 Cucumis melo HOM05D006129 ORTHO05D007446 5.9e-256 887.9 804 55.7
Ciclev10027854m.g Citrus clementina HOM05D006129 ORTHO05D007446 1.5e-254 883.2 778 57.7
ClCG07G001810 Citrullus lanatus HOM05D006129 ORTHO05D007446 1.4e-252 876.7 808 54.8
Potri.009G106800 Populus trichocarpa HOM05D006129 ORTHO05D007446 1.4e-252 876.7 791 56.6
CsaV3_3G028800 Cucumis sativus L. HOM05D006129 ORTHO05D007446 5.2e-252 874.8 805 55.0
Eucgr.L01320 Eucalyptus grandis HOM05D006129 ORTHO05D007446 1.3e-250 870.2 798 55.6
FvH4_2g06900 Fragaria vesca HOM05D006129 ORTHO05D007446 1.3e-250 870.2 742 57.3
Manes.17G094600 Manihot esculenta HOM05D006129 ORTHO05D007446 8.3e-250 867.5 822 54.7
Prupe.8G116000 Prunus persica HOM05D006129 ORTHO05D007446 8.3e-250 867.5 780 56.7
Nitab4.5_0007303g0010 Nicotiana tabacum HOM05D006129 ORTHO05D007446 4.1e-249 865.1 797 57.1
FAN27G0179 Fragaria x ananassa HOM05D006129 ORTHO05D007446 9.2e-249 864.0 770 56.5
Peaxi162Scf00789g00530 Petunia axillaris HOM05D006129 ORTHO05D007446 9.2e-249 864.0 820 55.7
FAN15G2181 Fragaria x ananassa HOM05D006129 ORTHO05D007446 1.2e-248 863.6 716 58.7
FAN24G2628 Fragaria x ananassa HOM05D006129 ORTHO05D007446 2.7e-248 862.4 742 56.7
Lalb_Chr10g0095451 Lupinus albus HOM05D006129 ORTHO05D007446 2.7e-248 862.4 804 55.8
Sed0004701 Sechium edule HOM05D006129 ORTHO05D007446 3.5e-248 862.1 816 54.4
THA.LOC104807348 Tarenaya hassleriana HOM05D006129 ORTHO05D007446 3.0e-247 859.0 821 54.4
Oeu057674.1 Olea europaea HOM05D006129 ORTHO05D007446 3.9e-247 858.6 789 56.7
Thhalv10022548m.g Eutrema salsugineum HOM05D006129 ORTHO05D007446 1.9e-246 856.3 735 56.3
Aqoxy3G03484 Aquilegia oxysepala HOM05D006129 ORTHO05D007446 3.3e-246 855.5 785 56.2
Actinidia12976 Actinidia chinensis HOM05D006129 ORTHO05D007446 4.3e-246 855.1 818 55.7
Lj2g0010354 Lotus japonicus HOM05D006129 ORTHO05D007446 7.3e-246 854.4 757 56.5
Ca_13480_v3 Cicer arietinum L. HOM05D006129 ORTHO05D007446 1.6e-245 853.2 809 53.4
TAR371G0476 Trochodendron aralioides HOM05D006129 ORTHO05D007446 3.6e-245 852.0 751 58.7
PGR042G1055 Punica granatum HOM05D006129 ORTHO05D007446 1.1e-244 850.5 794 55.0
Carub.0003s2972 Capsella rubella HOM05D006129 ORTHO05D007446 1.4e-244 850.1 788 53.4
Medtr1g026035 Medicago truncatula HOM05D006129 ORTHO05D007446 1.4e-244 850.1 764 55.6
Sp3g29130 Schrenkiella parvula HOM05D006129 ORTHO05D007446 2.3e-244 849.4 784 52.9
AL3G47590 Arabidopsis lyrata HOM05D006129 ORTHO05D007446 3.1e-244 849.0 786 53.7
A07p04960 Brassica napus HOM05D006129 ORTHO05D007446 5.2e-244 848.2 713 56.1
CARHR106180 Cardamine hirsuta HOM05D006129 ORTHO05D007446 9.8e-243 844.0 789 53.4
Glyma.20G009700 Glycine max HOM05D006129 ORTHO05D007446 3.7e-242 842.0 689 57.6
Migut.B00306 Erythranthe guttata HOM05D006129 ORTHO05D007446 4.9e-242 841.6 746 57.2
Nitab4.5_0001453g0090 Nicotiana tabacum HOM05D006129 ORTHO05D007446 6.4e-242 841.3 829 54.4
AT2G15820 Arabidopsis thaliana HOM05D006129 ORTHO05D007446 8.3e-242 840.9 796 53.8
Sc08g0000140 Simmondsia chinensis HOM05D006129 ORTHO05D007446 8.3e-242 840.9 765 56.3
Solyc11g066850.3 Solanum lycopersicum HOM05D006129 ORTHO05D007446 4.1e-241 838.6 814 54.2
TPR.G26422 Trifolium pratense HOM05D006129 ORTHO05D007446 2.0e-240 836.3 765 54.6
BraA07t28289Z Brassica rapa HOM05D006129 ORTHO05D007446 4.6e-240 835.1 713 55.3
MSTRG.20134 Avicennia marina HOM05D006129 ORTHO05D007446 6.0e-240 834.7 751 55.7
CAN.G644.34 Capsicum annuum HOM05D006129 ORTHO05D007446 1.7e-239 833.2 703 59.2
BcaC06g36090 Brassica carinata HOM05D006129 ORTHO05D007446 8.6e-239 830.9 769 52.4
C07p07940 Brassica napus HOM05D006129 ORTHO05D007446 8.6e-239 830.9 769 52.4
BolC7t41212H Brassica oleracea HOM05D006129 ORTHO05D007446 8.6e-239 830.9 769 52.4
BcaB03g16332 Brassica carinata HOM05D006129 ORTHO05D007446 1.1e-238 830.5 736 53.4
Glyma.07G178800 Glycine max HOM05D006129 ORTHO05D007446 4.3e-238 828.6 681 58.0
VMungo0464G0688 Vigna mungo HOM05D006129 ORTHO05D007446 6.8e-236 821.2 679 57.4
Aa31LG8G13380 Aethionema arabicum HOM05D006129 ORTHO05D007446 2.9e-234 815.8 778 52.7
Phvul.002G308800 Phaseolus vulgaris HOM05D006129 ORTHO05D007446 2.1e-232 809.7 682 56.3
arahy.Tifrunner.gnm1.ann1.769PPM Arachis hypogaea HOM05D006129 ORTHO05D007446 7.8e-232 807.7 744 55.1
unitig_744.g24241 Utricularia gibba HOM05D006129 ORTHO05D007446 4.0e-228 795.4 706 55.0
PGSC0003DMG400026525 Solanum tuberosum HOM05D006129 ORTHO05D007446 9.9e-227 790.8 650 60.2
EL10Ac9g21818 Beta vulgaris HOM05D006129 ORTHO05D007446 1.9e-225 786.6 725 53.1
Sopen11g026560 Solanum pennellii HOM05D006129 ORTHO05D007446 6.0e-224 781.6 662 59.5
AUR62011424 Chenopodium quinoa HOM05D006129 ORTHO05D007446 1.6e-221 773.5 805 49.3
ATR0665G475 Amborella trichopoda HOM05D006129 ORTHO05D007446 5.1e-215 751.9 686 53.1
SGA_v2.0_scaffold58G20604 Striga asiatica HOM05D006129 ORTHO05D007446 8.7e-215 751.1 718 52.5
Ah.01g006750 Amaranthus hybridus HOM05D006129 ORTHO05D007446 4.0e-212 742.3 750 49.1
Os02g0702000 Oryza sativa ssp. japonica HOM05D006129 ORTHO05D007446 1.9e-209 733.4 686 51.5
HPP92_022045 Vanilla planifolia HOM05D006129 ORTHO05D007446 3.2e-209 732.6 673 51.9
Zm00001eb251880 Zea mays HOM05D006129 ORTHO05D007446 1.0e-207 727.6 691 51.5
AUR62016636 Chenopodium quinoa HOM05D006129 ORTHO05D007446 4.3e-206 722.2 677 53.0
FAN20G2787 Fragaria x ananassa HOM05D006129 ORTHO05D007446 5.3e-204 715.3 618 57.6
Sabra09G0081600 Salix brachista HOM05D006129 ORTHO05D007446 1.8e-199 700.3 580 58.4
Eucgr.G01504 Eucalyptus grandis HOM05D006129 ORTHO05D007446 2.8e-189 666.4 799 46.4
Medtr0381s0010 Medicago truncatula HOM05D006129 ORTHO05D007446 3.1e-188 662.9 610 53.4
TAR629G1168 Trochodendron aralioides HOM05D006129 ORTHO05D007446 3.2e-185 652.9 541 59.3
SEGI_31419 Sequoiadendron giganteum HOM05D006129 ORTHO05D007446 3.4e-171 606.3 696 44.8
CDE04G1903 Ceratophyllum demersum HOM05D006129 ORTHO05D007446 4.4e-166 589.3 696 45.3
Eucgr.L00820 Eucalyptus grandis HOM05D006129 ORTHO05D007446 8.5e-162 575.1 580 51.9
Psat6g001360 Pisum sativum HOM05D006129 ORTHO05D007446 1.7e-149 534.3 806 39.5
Cc02_g18440 Coffea canephora HOM05D006129 ORTHO05D007446 4.5e-139 499.6 465 55.3
Hund00318 Selenicereus undatus HOM05D006129 ORTHO05D007446 5.0e-138 496.1 436 57.1
Atru.chr5.2887 Acer truncatum HOM05D006129 ORTHO05D007446 1.1e-116 425.2 532 45.7
TAR371G0992 Trochodendron aralioides HOM05D006129 ORTHO05D007446 2.1e-104 384.4 616 39.6
Atru.chr5.2823 Acer truncatum HOM05D006129 ORTHO05D007446 3.3e-97 360.5 488 43.9
QL11p038542 Quercus lobata HOM05D006129 ORTHO05D007446 7.3e-97 359.4 340 55.0
TAR371G0058 Trochodendron aralioides HOM05D006129 ORTHO05D007446 9.6e-89 332.4 390 50.5
Pp3c25_10050 Physcomitrium patens HOM05D006129 ORTHO05D007446 3.1e-87 327.4 737 29.4
Atru.chr5.2881 Acer truncatum HOM05D006129 ORTHO05D007446 5.3e-79 300.1 310 51.3
Atru.chr5.2826 Acer truncatum HOM05D006129 ORTHO05D007446 2.5e-76 291.2 390 46.2
AagrBONN_evm.TU.Sc2ySwM_344.1734 Anthoceros agrestis HOM05D006129 ORTHO05D007446 4.8e-72 276.9 672 28.3
SMO356G0628 Selaginella moellendorffii HOM05D006129 ORTHO05D007446 2.6e-70 271.2 709 28.2
Mapoly0036s0055 Marchantia polymorpha HOM05D006129 ORTHO05D007446 2.2e-64 251.5 672 26.6
TAR629G1760 Trochodendron aralioides HOM05D006129 ORTHO05D007446 1.0e-53 216.1 177 61.6
AagrBONN_evm.TU.Sc2ySwM_344.5085 Anthoceros agrestis HOM05D006129 ORTHO05D007446 1.5e-49 202.2 698 23.9
Pp3c16_23700 Physcomitrium patens HOM05D006129 ORTHO05D007446 3.2e-44 184.5 681 24.2
arahy.Tifrunner.gnm1.ann1.SUMB0F Arachis hypogaea HOM05D006129 ORTHO05D007446 1.2e-43 182.6 164 53.7
Cc02_g18430 Coffea canephora HOM05D006129 ORTHO05D007446 1.1e-39 169.5 156 57.7
Atru.chr5.2882 Acer truncatum HOM05D006129 ORTHO05D007446 3.5e-30 137.9 195 41.0
QL11p038477 Quercus lobata HOM05D006129 ORTHO05D007446 4.1e-23 114.4 205 42.0
CBR_g8924 Chara braunii HOM05D006129 ORTHO05D007446 7.8e-14 83.6 763 19.9
RcHm_v2.0_Chr6g0302241 Rosa chinensis HOM05D006129 ORTHO05D007446 7.8e-14 83.6 52 71.2
Atru.chr5.2820 Acer truncatum HOM05D006129 ORTHO05D007446 1.0e-13 83.2 173 34.7
RcHm_v2.0_Chr1g0376021 Rosa chinensis HOM05D006129 ORTHO05D007446 2.5e-12 78.6 52 69.2
CBR_g19584 Chara braunii HOM05D006129 ORTHO05D007446 9.5e-12 76.6 583 19.0
RcHm_v2.0_Chr2g0152801 Rosa chinensis HOM05D006129 ORTHO05D007446 2.1e-11 75.5 60 63.3
arahy.Tifrunner.gnm1.ann1.CUF5YV Arachis hypogaea HOM05D002479 ORTHO05D002675 1.1e-10 73.2 396 21.2
Lalb_Chr12g0200631 Lupinus albus HOM05D001779 ORTHO05D001753 1.4e-07 62.8 467 21.2
Sopen01g021730 Solanum pennellii HOM05D001779 ORTHO05D001753 2.4e-07 62.0 406 20.0
FAN17G1880 Fragaria x ananassa HOM05D006414 ORTHO05D007780 4.1e-07 61.2 107 28.0
HPP92_018350 Vanilla planifolia HOM05D002649 ORTHO05D002838 3.5e-06 58.2 116 29.3
HPP92_012848 Vanilla planifolia HOM05D000891 ORTHO05D000761 6.0e-06 57.4 147 27.9


User provided reference genes

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