Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_026018 Vanilla planifolia HOM05D006329 ORTHO05D008357 8.9e-207 723.4 372 100.0
HPP92_027741 Vanilla planifolia HOM05D006329 ORTHO05D008357 4.6e-147 525.0 302 89.4
MBI18_g02633_MAGBIO Magnolia biondii HOM05D006329 ORTHO05D008357 1.8e-127 459.9 369 65.3
Nn6g35280 Nelumbo nucifera HOM05D006329 ORTHO05D008357 6.5e-125 451.4 359 67.4
Potri.008G035500 Populus trichocarpa HOM05D006329 ORTHO05D008357 8.0e-123 444.5 375 63.5
MD07G1170000 Malus domestica HOM05D006329 ORTHO05D008357 1.0e-122 444.1 370 64.6
Sabra08G0023700 Salix brachista HOM05D006329 ORTHO05D008357 2.3e-122 443.0 375 63.7
Aqoxy1G01144 Aquilegia oxysepala HOM05D006329 ORTHO05D008357 5.2e-122 441.8 386 61.7
CDE03G0204 Ceratophyllum demersum HOM05D006329 ORTHO05D008357 3.4e-121 439.1 353 64.6
Prupe.2G208900 Prunus persica HOM05D006329 ORTHO05D008357 2.2e-120 436.4 333 70.0
PSO063G6532 Papaver somniferum HOM05D006329 ORTHO05D008357 2.8e-120 436.0 374 62.3
PSO339G5012 Papaver somniferum HOM05D006329 ORTHO05D008357 4.8e-120 435.3 374 61.8
Nitab4.5_0001659g0150 Nicotiana tabacum HOM05D006329 ORTHO05D008357 6.3e-120 434.9 362 64.9
TAR623G1379 Trochodendron aralioides HOM05D006329 ORTHO05D008357 3.1e-119 432.6 388 61.6
Nitab4.5_0001450g0040 Nicotiana tabacum HOM05D006329 ORTHO05D008357 4.1e-119 432.2 362 64.1
Thecc.10G083200 Theobroma cacao HOM05D006329 ORTHO05D008357 3.5e-118 429.1 367 63.2
Gohir.A10G203300 Gossypium hirsutum HOM05D006329 ORTHO05D008357 4.5e-118 428.7 365 63.6
Gohir.D10G211400 Gossypium hirsutum HOM05D006329 ORTHO05D008357 1.0e-117 427.6 365 63.3
Gorai.011G237100 Gossypium raimondii HOM05D006329 ORTHO05D008357 1.0e-117 427.6 365 63.3
Actinidia34805 Actinidia chinensis HOM05D006329 ORTHO05D008357 1.9e-116 423.3 350 64.6
Thhalv10016747m.g Eutrema salsugineum HOM05D006329 ORTHO05D008357 2.5e-116 422.9 384 59.6
Hma1.2p1_2894F.1_g329960 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 2.5e-116 422.9 386 61.1
Migut.F01702 Erythranthe guttata HOM05D006329 ORTHO05D008357 3.2e-116 422.5 358 63.4
Cc02_g10940 Coffea canephora HOM05D006329 ORTHO05D008357 7.2e-116 421.4 359 62.7
AL4G36440 Arabidopsis lyrata HOM05D006329 ORTHO05D008357 1.2e-115 420.6 392 59.7
MSTRG.389 Avicennia marina HOM05D006329 ORTHO05D008357 2.8e-115 419.5 356 62.9
Duzib114G0755 Durio zibethinus HOM05D006329 ORTHO05D008357 3.6e-115 419.1 394 58.4
PGR142G3823 Punica granatum HOM05D006329 ORTHO05D008357 3.6e-115 419.1 356 63.8
Atru.chr12.838 Acer truncatum HOM05D003507 ORTHO05D008357 6.1e-115 418.3 355 63.1
Ciclev10031516m.g Citrus clementina HOM05D006329 ORTHO05D008357 1.0e-114 417.5 356 62.6
COL.COLO4_17136 Corchorus olitorius HOM05D006329 ORTHO05D008357 1.4e-114 417.2 398 59.3
SalBow6G7241 Salvia bowleyana HOM05D006329 ORTHO05D008357 6.8e-114 414.8 357 62.2
QL08p054507 Quercus lobata HOM05D006329 ORTHO05D008357 1.5e-113 413.7 356 63.5
AT2G39140 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 2.6e-113 412.9 391 59.6
Solyc11g008360.3 Solanum lycopersicum HOM05D006329 ORTHO05D008357 2.6e-113 412.9 368 61.7
CiPaw.01G268700 Carya illinoinensis HOM05D006329 ORTHO05D008357 3.4e-113 412.5 330 66.7
THA.LOC104824234 Tarenaya hassleriana HOM05D006329 ORTHO05D008357 3.4e-113 412.5 360 61.9
FAN06G3910 Fragaria x ananassa HOM05D006329 ORTHO05D008357 4.4e-113 412.1 371 60.9
Sp4g21490 Schrenkiella parvula HOM05D006329 ORTHO05D008357 4.4e-113 412.1 380 59.7
PGSC0003DMG400007434 Solanum tuberosum HOM05D006329 ORTHO05D008357 5.7e-113 411.8 367 61.0
QL08p054383 Quercus lobata HOM05D006329 ORTHO05D008357 7.5e-113 411.4 356 63.2
RcHm_v2.0_Chr1g0362601 Rosa chinensis HOM05D006329 ORTHO05D008357 7.5e-113 411.4 349 63.3
CARHR133910 Cardamine hirsuta HOM05D006329 ORTHO05D008357 9.8e-113 411.0 396 58.3
FvH4_7g18810 Fragaria vesca HOM05D006329 ORTHO05D008357 9.8e-113 411.0 347 63.1
FAN10G3782 Fragaria x ananassa HOM05D006329 ORTHO05D008357 9.8e-113 411.0 349 63.3
BcaB02g09141 Brassica carinata HOM05D006329 ORTHO05D008357 1.3e-112 410.6 378 59.8
MELO3C019822.2 Cucumis melo HOM05D006329 ORTHO05D008357 1.7e-112 410.2 319 67.7
Zm00001eb004240 Zea mays HOM05D006329 ORTHO05D008357 1.7e-112 410.2 370 58.9
Haze_16856 Corylus avellana HOM05D006329 ORTHO05D008357 3.7e-112 409.1 336 64.0
Sed0004104 Sechium edule HOM05D006329 ORTHO05D008357 3.7e-112 409.1 353 63.7
Eucgr.G02867 Eucalyptus grandis HOM05D006329 ORTHO05D008357 4.9e-112 408.7 330 65.2
ATR0219G015 Amborella trichopoda HOM05D006329 ORTHO05D008357 8.3e-112 407.9 344 62.8
Ca_10544_v3 Cicer arietinum L. HOM05D006329 ORTHO05D008357 1.4e-111 407.1 337 62.3
FAN10G0068 Fragaria x ananassa HOM05D006329 ORTHO05D008357 2.4e-111 406.4 349 63.0
Carub.0004s2119 Capsella rubella HOM05D006329 ORTHO05D008357 4.1e-111 405.6 390 58.5
Manes.05G201000 Manihot esculenta HOM05D006329 ORTHO05D008357 5.4e-111 405.2 400 58.0
Glyma.10G207800 Glycine max HOM05D006329 ORTHO05D008357 2.0e-110 403.3 361 59.3
CsaV3_6G036680 Cucumis sativus L. HOM05D006329 ORTHO05D008357 2.7e-110 402.9 334 64.7
Phvul.007G098900 Phaseolus vulgaris HOM05D006329 ORTHO05D008357 5.9e-110 401.7 340 60.3
arahy.Tifrunner.gnm1.ann1.KFTR8M Arachis hypogaea HOM05D006329 ORTHO05D008357 7.8e-110 401.4 389 57.3
TPR.G10288 Trifolium pratense HOM05D006329 ORTHO05D008357 1.0e-109 401.0 330 62.7
GSVIVG01016221001 Vitis vinifera HOM05D006329 ORTHO05D008357 1.0e-109 401.0 267 74.9
Medtr1g094190 Medicago truncatula HOM05D006329 ORTHO05D008357 3.8e-109 399.1 332 61.7
CANSAT56G2601 Cannabis sativa HOM05D006329 ORTHO05D008357 1.9e-108 396.7 333 63.4
Psat6g180040 Pisum sativum HOM05D006329 ORTHO05D008357 5.6e-108 395.2 327 61.5
ClCG08G007690 Citrullus lanatus HOM05D006329 ORTHO05D008357 2.3e-106 389.8 303 67.7
Oeu013841.1 Olea europaea HOM05D006329 ORTHO05D008357 3.0e-106 389.4 384 56.5
A05p07160 Brassica napus HOM05D006329 ORTHO05D008357 5.2e-106 388.7 381 57.2
BraA05t19681Z Brassica rapa HOM05D006329 ORTHO05D008357 1.2e-105 387.5 381 57.0
EL10Ac6g14260 Beta vulgaris HOM05D006329 ORTHO05D008357 2.6e-105 386.3 306 66.7
Lj5g0015116 Lotus japonicus HOM05D006329 ORTHO05D008357 3.4e-105 386.0 335 60.3
FAN03G2323 Fragaria x ananassa HOM05D003507 ORTHO05D004324 9.8e-105 384.4 290 68.6
Rhsim09G0148200 Rhododendron simsii HOM05D000461 ORTHO05D001829 9.8e-105 384.4 370 57.0
FAN06G0494 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.3e-104 384.0 376 57.7
Ah.02g128110 Amaranthus hybridus HOM05D006329 ORTHO05D008357 1.7e-104 383.6 320 64.4
HanXRQChr14g0456591 Helianthus annuus HOM05D006329 ORTHO05D008357 3.7e-104 382.5 288 69.4
Cpa.g.sc53.128 Carica papaya HOM05D006329 ORTHO05D008357 4.9e-104 382.1 323 62.2
Sopen11g004170 Solanum pennellii HOM05D006329 ORTHO05D008357 3.2e-103 379.4 295 67.8
SGA_v2.0_scaffold51G18714 Striga asiatica HOM05D006329 ORTHO05D008357 5.4e-103 378.6 348 61.5
Peaxi162Scf00145g01311 Petunia axillaris HOM05D006329 ORTHO05D008357 9.2e-103 377.9 324 63.0
Cfa001679 Carpinus fangiana HOM05D006329 ORTHO05D008357 2.0e-102 376.7 295 66.4
Lsat_1_v5_gn_2_113040 Lactuca sativa HOM05D006329 ORTHO05D008357 2.0e-102 376.7 299 66.2
BolC4t22452H Brassica oleracea HOM05D006329 ORTHO05D008357 2.7e-102 376.3 327 60.9
BcaC02g12042 Brassica carinata HOM05D006329 ORTHO05D008357 3.5e-102 375.9 328 60.7
C04p08570 Brassica napus HOM05D006329 ORTHO05D008357 3.5e-102 375.9 328 60.7
Lalb_Chr21g0313671 Lupinus albus HOM05D006329 ORTHO05D008357 3.0e-101 372.9 348 56.6
arahy.Tifrunner.gnm1.ann1.21BGD2 Arachis hypogaea HOM05D006329 ORTHO05D008357 8.6e-101 371.3 379 55.4
CAN.G321.64 Capsicum annuum HOM05D006329 ORTHO05D008357 1.5e-97 360.5 250 73.6
vmacro04842 Vaccinium macrocarpon HOM05D006329 ORTHO05D008357 1.4e-95 354.0 407 50.6
Hund20700 Selenicereus undatus HOM05D006329 ORTHO05D008357 7.0e-95 351.7 409 50.4
EL10Ac4g09587 Beta vulgaris HOM05D006329 ORTHO05D008357 7.8e-94 348.2 312 59.9
DCAR_005490 Daucus carota HOM05D006329 ORTHO05D008357 7.8e-94 348.2 358 55.0
ECA238G1295 Erigeron canadensis HOM05D006329 ORTHO05D001676 1.0e-93 347.8 250 70.4
CSS0005771 Camellia sinensis var. sinensis HOM05D006329 ORTHO05D008357 3.9e-93 345.9 378 53.4
Os03g0152700 Oryza sativa ssp. japonica HOM05D006329 ORTHO05D008357 3.9e-93 345.9 334 55.4
HPP92_026744 Vanilla planifolia HOM05D006329 ORTHO05D008357 1.8e-90 337.0 260 72.7
VMungo0251G3605 Vigna mungo HOM05D006329 ORTHO05D008357 2.3e-90 336.7 317 57.4
Dinv31231 Davidia involucrata HOM05D006329 ORTHO05D008357 1.3e-85 320.9 276 63.8
Mapoly0002s0007 Marchantia polymorpha HOM05D006329 ORTHO05D008357 1.7e-85 320.5 265 60.4
Lj3A938T44 Lonicera japonica HOM05D006329 ORTHO05D008357 3.0e-85 319.7 343 54.2
RhsimUnG0185600 Rhododendron simsii HOM05D000461 ORTHO05D001829 2.1e-83 313.5 336 53.9
AUR62002759 Chenopodium quinoa HOM05D006329 ORTHO05D008357 3.1e-82 309.7 233 68.7
Pp3c7_13640 Physcomitrium patens HOM05D006329 ORTHO05D008357 5.8e-81 305.4 296 55.7
Aa31LG5G20460 Aethionema arabicum HOM05D006329 ORTHO05D008357 1.0e-77 294.7 312 56.1
Lalb_Chr21g0313541 Lupinus albus HOM05D006329 ORTHO05D008357 6.6e-77 292.0 210 67.1
SMO329G0071 Selaginella moellendorffii HOM05D006329 ORTHO05D008357 1.1e-74 284.6 250 57.2
Cfa001678 Carpinus fangiana HOM05D006329 ORTHO05D008357 5.3e-66 255.8 219 62.6
Sc09g0006060 Simmondsia chinensis HOM05D006329 ORTHO05D008357 6.7e-61 238.8 194 66.0
FAN01G2166 Fragaria x ananassa HOM05D006329 ORTHO05D008357 7.4e-60 235.3 186 66.7
MCO14G528 Micromonas commoda HOM05D006329 ORTHO05D008357 2.5e-47 193.7 256 44.9
CBR_g29624 Chara braunii HOM05D006329 ORTHO05D008357 1.8e-45 187.6 162 59.3
Cre02.g095121 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 9.0e-42 175.3 320 37.8
PRCOL_00004574 Prasinoderma coloniale HOM05D006329 ORTHO05D008357 2.5e-36 157.1 250 40.4
AUR62014125 Chenopodium quinoa HOM05D006329 ORTHO05D008357 6.5e-32 142.5 91 79.1
Hma1.2p1_2894F.1_g329970 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 8.2e-27 125.6 79 73.4
Pp3s196_90 Physcomitrium patens HOM05D006329 ORTHO05D008357 3.2e-23 113.6 244 30.3
AT3G43340 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 2.1e-22 110.9 74 74.3
Hma1.2p1_2894F.1_g329973 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 2.9e-16 90.5 54 74.1
CAN.G176.13 Capsicum annuum HOM05D006329 ORTHO05D033978 3.8e-16 90.1 83 56.6
Cre07.g323550 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 3.3e-12 77.0 246 28.0
MCO04G216 Micromonas commoda HOM05D006329 ORTHO05D008357 3.3e-12 77.0 252 26.6
Glyma.20G182966 Glycine max HOM05D006329 ORTHO05D028485 4.1e-10 70.1 51 66.7
MCO01G641 Micromonas commoda HOM05D006329 ORTHO05D008357 1.2e-09 68.6 238 26.5
CAN.G184.4 Capsicum annuum HOM05D006329 ORTHO05D028485 1.6e-09 68.2 53 62.3
Potri.010G226901 Populus trichocarpa HOM05D006329 ORTHO05D028485 4.7e-06 56.6 51 62.7


User provided reference genes

Program Settings