Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_024246 Vanilla planifolia HOM05D002849 ORTHO05D007186 4.6e-143 511.1 248 100.0
HPP92_024207 Vanilla planifolia HOM05D002849 ORTHO05D007186 2.0e-125 452.6 239 93.7
Nn6g31840 Nelumbo nucifera HOM05D002849 ORTHO05D007186 6.3e-116 421.0 239 86.2
Gohir.D05G184300 Gossypium hirsutum HOM05D002849 ORTHO05D007186 1.1e-115 420.2 239 84.9
Gorai.009G189800 Gossypium raimondii HOM05D002849 ORTHO05D007186 1.1e-115 420.2 239 84.9
Cc10_g00890 Coffea canephora HOM05D002849 ORTHO05D007186 1.4e-115 419.9 240 85.0
CANSAT11G2551 Cannabis sativa HOM05D002849 ORTHO05D007186 1.8e-115 419.5 239 85.8
Gohir.A05G181300 Gossypium hirsutum HOM05D002849 ORTHO05D007186 2.4e-115 419.1 239 84.5
Atru.chr13.175_Atru.chr13.176 Acer truncatum HOM05D002849 ORTHO05D007186 4.1e-115 418.3 239 84.5
Zm00001eb255730 Zea mays HOM05D002849 ORTHO05D007186 5.3e-115 417.9 239 84.9
Aqoxy6G01855 Aquilegia oxysepala HOM05D002849 ORTHO05D007186 7.0e-115 417.5 239 84.9
ECA246G5259 Erigeron canadensis HOM05D002849 ORTHO05D007186 7.0e-115 417.5 239 84.5
Os02g0762300 Oryza sativa ssp. japonica HOM05D002849 ORTHO05D007186 7.0e-115 417.5 239 84.5
Duzib093G2127 Durio zibethinus HOM05D002849 ORTHO05D007186 1.2e-114 416.8 239 84.5
Migut.N03194 Erythranthe guttata HOM05D002849 ORTHO05D007186 1.2e-114 416.8 240 84.2
Eucgr.F03540 Eucalyptus grandis HOM05D002849 ORTHO05D007186 1.2e-114 416.8 239 84.5
Potri.005G083500 Populus trichocarpa HOM05D002849 ORTHO05D007186 1.2e-114 416.8 237 85.7
Prupe.1G356900 Prunus persica HOM05D002849 ORTHO05D007186 1.2e-114 416.8 239 84.9
CiPaw.08G071100 Carya illinoinensis HOM05D002849 ORTHO05D007186 1.6e-114 416.4 239 84.5
Dinv39573 Davidia involucrata HOM05D002849 ORTHO05D007186 1.6e-114 416.4 239 84.5
FvH4_2g37771 Fragaria vesca HOM05D002849 ORTHO05D007186 1.6e-114 416.4 239 84.5
CSS0035799 Camellia sinensis var. sinensis HOM05D002849 ORTHO05D007186 2.0e-114 416.0 239 84.1
Sc02g0008960 Simmondsia chinensis HOM05D002849 ORTHO05D007186 2.0e-114 416.0 239 84.5
Os01g0598900 Oryza sativa ssp. japonica HOM05D002849 ORTHO05D007186 2.6e-114 415.6 239 83.7
AL4G43230 Arabidopsis lyrata HOM05D002849 ORTHO05D007186 5.9e-114 414.5 239 83.7
AT2G44270 Arabidopsis thaliana HOM05D002849 ORTHO05D007186 5.9e-114 414.5 239 83.7
PGR083G0750 Punica granatum HOM05D002849 ORTHO05D007186 5.9e-114 414.5 239 83.7
Sp4g26340 Schrenkiella parvula HOM05D002849 ORTHO05D007186 5.9e-114 414.5 237 84.0
CARHR069720 Cardamine hirsuta HOM05D002849 ORTHO05D007186 7.7e-114 414.1 237 84.4
Carub.0004s2686 Capsella rubella HOM05D002849 ORTHO05D007186 1.0e-113 413.7 239 83.3
MELO3C011328.2 Cucumis melo HOM05D002849 ORTHO05D007186 1.7e-113 412.9 237 84.8
Thecc.08G055100 Theobroma cacao HOM05D002849 ORTHO05D007186 1.7e-113 412.9 239 83.7
TWI56G0831 Tripterygium wilfordii HOM05D002849 ORTHO05D007186 1.7e-113 412.9 239 83.3
Thhalv10018770m.g Eutrema salsugineum HOM05D002849 ORTHO05D007186 2.2e-113 412.5 237 84.0
Manes.08G142100 Manihot esculenta HOM05D002849 ORTHO05D007186 2.2e-113 412.5 239 83.3
Carub.0002s2306 Capsella rubella HOM05D002849 ORTHO05D007186 2.9e-113 412.1 239 82.8
Haze_22739 Corylus avellana HOM05D002849 ORTHO05D007186 2.9e-113 412.1 240 84.2
Sed0011348 Sechium edule HOM05D002849 ORTHO05D007186 3.8e-113 411.8 237 84.4
AL2G36230 Arabidopsis lyrata HOM05D002849 ORTHO05D007186 5.0e-113 411.4 237 84.4
TAR376G0763 Trochodendron aralioides HOM05D002849 ORTHO05D007186 5.0e-113 411.4 240 83.8
Ca_15284_v3 Cicer arietinum L. HOM05D002849 ORTHO05D007186 8.5e-113 410.6 239 82.4
Ca_15420_v3 Cicer arietinum L. HOM05D002849 ORTHO05D007186 8.5e-113 410.6 239 82.4
THA.LOC104811452 Tarenaya hassleriana HOM05D002849 ORTHO05D007186 8.5e-113 410.6 239 82.4
Hund05132 Selenicereus undatus HOM05D002849 ORTHO05D007186 1.9e-112 409.5 239 83.3
Glyma.04G002200 Glycine max HOM05D002849 ORTHO05D007186 4.2e-112 408.3 239 82.4
PSO541G1452 Papaver somniferum HOM05D002849 ORTHO05D007186 4.2e-112 408.3 239 82.8
PSO675G6932 Papaver somniferum HOM05D002849 ORTHO05D007186 4.2e-112 408.3 239 82.8
Ciclev10001644m.g Citrus clementina HOM05D002849 ORTHO05D007186 7.2e-112 407.5 237 82.7
GSVIVG01008705001 Vitis vinifera HOM05D002849 ORTHO05D007186 7.2e-112 407.5 253 80.2
A05p04470 Brassica napus HOM05D002849 ORTHO05D007186 9.4e-112 407.1 249 79.9
Oeu046334.1 Olea europaea HOM05D002849 ORTHO05D007186 9.4e-112 407.1 248 81.0
Cfa017767 Carpinus fangiana HOM05D002849 ORTHO05D007186 2.1e-111 406.0 240 83.3
Medtr3g118250 Medicago truncatula HOM05D002849 ORTHO05D007186 2.7e-111 405.6 239 82.4
Lsat_1_v5_gn_3_7661 Lactuca sativa HOM05D002849 ORTHO05D007186 6.1e-111 404.4 239 83.7
BraA05t19423Z Brassica rapa HOM05D002849 ORTHO05D007186 1.4e-110 403.3 259 76.8
MBI08_g35553_MAGBIO Magnolia biondii HOM05D002849 ORTHO05D007186 1.8e-110 402.9 239 82.8
A07p41740 Brassica napus HOM05D002849 ORTHO05D007186 5.2e-110 401.4 239 82.0
Lj1g0000302 Lotus japonicus HOM05D002849 ORTHO05D007186 6.7e-110 401.0 237 82.3
MD08G1004800 Malus domestica HOM05D002849 ORTHO05D007186 6.7e-110 401.0 239 82.8
ClCG08G013910 Citrullus lanatus HOM05D002849 ORTHO05D007186 8.8e-110 400.6 238 84.0
Aa31LG1G25890 Aethionema arabicum HOM05D002849 ORTHO05D007186 3.3e-109 398.7 239 81.6
Phvul.009G117600 Phaseolus vulgaris HOM05D002849 ORTHO05D007186 3.3e-109 398.7 239 80.3
Rhsim06G0009600 Rhododendron simsii HOM05D002849 ORTHO05D007186 2.8e-108 395.6 287 71.4
C04p05180 Brassica napus HOM05D002849 ORTHO05D007186 8.2e-108 394.0 242 79.8
vmacro21838 Vaccinium macrocarpon HOM05D002849 ORTHO05D007186 1.8e-107 392.9 293 69.6
BolC4t22158H Brassica oleracea HOM05D002849 ORTHO05D007186 9.1e-107 390.6 271 73.1
Mapoly0148s0040 Marchantia polymorpha HOM05D002849 ORTHO05D007186 2.0e-106 389.4 239 77.8
SMO118G0346 Selaginella moellendorffii HOM05D002849 ORTHO05D007186 2.7e-106 389.0 237 78.1
DCAR_016752 Daucus carota HOM05D002022 ORTHO05D002056 2.2e-105 386.0 239 79.9
unitig_744.g24607 Utricularia gibba HOM05D002849 ORTHO05D007186 2.2e-105 386.0 240 80.4
arahy.Tifrunner.gnm1.ann1.ID8SUW Arachis hypogaea HOM05D002849 ORTHO05D007186 3.8e-105 385.2 239 79.9
BraA07t31703Z Brassica rapa HOM05D002849 ORTHO05D007186 6.5e-105 384.4 255 76.1
Pp3c27_3320 Physcomitrium patens HOM05D002849 ORTHO05D007186 1.5e-104 383.3 239 77.4
FAN27G2060 Fragaria x ananassa HOM05D002849 ORTHO05D007186 2.5e-104 382.5 239 79.5
BcaB02g08806 Brassica carinata HOM05D002849 ORTHO05D007186 9.4e-104 380.6 237 78.5
BcaNung06602 Brassica carinata HOM05D002849 ORTHO05D007186 4.7e-103 378.3 237 78.5
FAN20G1564 Fragaria x ananassa HOM05D002849 ORTHO05D007186 2.3e-102 375.9 239 78.7
CsaV3_2G024550 Cucumis sativus L. HOM05D000201 ORTHO05D000490 4.0e-102 375.2 252 75.8
QL02p013578 Quercus lobata HOM05D002849 ORTHO05D007186 4.0e-102 375.2 270 71.5
Sp5g31310 Schrenkiella parvula HOM05D002849 ORTHO05D007186 2.6e-101 372.5 237 78.1
AagrBONN_evm.TU.Sc2ySwM_344.4630 Anthoceros agrestis HOM05D002849 ORTHO05D007186 3.4e-101 372.1 204 86.3
CBR_g55299 Chara braunii HOM05D002849 ORTHO05D007186 5.7e-101 371.3 237 74.7
Lj4A14T52 Lonicera japonica HOM05D002849 ORTHO05D007186 6.3e-100 367.9 271 70.1
C06p50120 Brassica napus HOM05D002849 ORTHO05D007186 9.1e-99 364.0 237 76.8
Nitab4.5_0001131g0060 Nicotiana tabacum HOM05D002849 ORTHO05D007186 1.7e-97 359.8 255 73.3
Hma1.2p1_1100F.1_g257100 Hydrangea macrophylla HOM05D002849 ORTHO05D007186 1.9e-96 356.3 241 75.9
Cre16.g666100 Chlamydomonas reinhardtii HOM05D002849 ORTHO05D007186 1.2e-93 347.1 227 74.4
Cfa014032 Carpinus fangiana HOM05D002849 ORTHO05D007186 3.4e-93 345.5 239 73.2
BcaC08g47111 Brassica carinata HOM05D002849 ORTHO05D007186 1.4e-91 340.1 238 73.1
SGA_v2.0_scaffold19G08599 Striga asiatica HOM05D002849 ORTHO05D007186 1.2e-90 337.0 327 57.8
TPR.G36468 Trifolium pratense HOM05D002849 ORTHO05D007186 1.0e-89 334.0 239 71.1
AT1G76170 Arabidopsis thaliana HOM05D002849 ORTHO05D007186 2.1e-87 326.2 172 89.5
EL10Ac2g04301 Beta vulgaris HOM05D002849 ORTHO05D007186 4.4e-85 318.5 239 69.9
VMungo1309G1771 Vigna mungo HOM05D002849 ORTHO05D007186 2.2e-84 316.2 239 67.8
arahy.Tifrunner.gnm1.ann1.D80FKX Arachis hypogaea HOM05D002849 ORTHO05D007186 1.1e-83 313.9 239 68.6
BolC6t40052H Brassica oleracea HOM05D002849 ORTHO05D007186 3.2e-83 312.4 237 68.8
Haze_27194 Corylus avellana HOM05D002849 ORTHO05D007186 5.4e-83 311.6 252 60.3
Lalb_Chr23g0264921 Lupinus albus HOM05D002849 ORTHO05D007186 6.0e-82 308.1 264 61.4
BcaC08g47284 Brassica carinata HOM05D002849 ORTHO05D007186 3.0e-81 305.8 238 67.6
HanXRQChr17g0533361 Helianthus annuus HOM05D002849 ORTHO05D007186 3.9e-81 305.4 178 83.7
RcHm_v2.0_Chr6g0303961 Rosa chinensis HOM05D002849 ORTHO05D007186 1.9e-80 303.1 178 83.1
Solyc08g074590.2 Solanum lycopersicum HOM05D002849 ORTHO05D007186 2.5e-80 302.8 180 82.2
Sopen08g023190 Solanum pennellii HOM05D002849 ORTHO05D007186 2.5e-80 302.8 180 82.2
PRCOL_00001104 Prasinoderma coloniale HOM05D002849 ORTHO05D007186 7.3e-80 301.2 231 63.6
ATR0661G072 Amborella trichopoda HOM05D002849 ORTHO05D007186 4.7e-79 298.5 186 78.5
COL.COLO4_21615 Corchorus olitorius HOM05D002849 ORTHO05D007186 8.0e-79 297.7 242 64.9
CARHR139450 Cardamine hirsuta HOM05D002849 ORTHO05D007186 1.1e-78 297.4 178 81.5
Cfa027047 Carpinus fangiana HOM05D002849 ORTHO05D007186 3.4e-77 292.4 225 64.0
MD15G1004300 Malus domestica HOM05D002849 ORTHO05D007186 4.9e-76 288.5 252 61.5
Peaxi162Scf00166g00641 Petunia axillaris HOM05D002849 ORTHO05D007186 1.4e-75 287.0 175 81.1
TAR628G0269 Trochodendron aralioides HOM05D002849 ORTHO05D007186 2.7e-74 282.7 179 79.9
SHI05854 Sapria himalayana HOM05D002849 ORTHO05D007186 5.6e-72 275.0 259 56.8
Cpa.g.sc26.233 Carica papaya HOM05D002849 ORTHO05D007186 5.4e-67 258.5 228 62.7
AUR62036771 Chenopodium quinoa HOM05D002849 ORTHO05D007186 3.5e-66 255.8 239 58.2
Nitab4.5_0000907g0040 Nicotiana tabacum HOM05D002849 ORTHO05D007186 3.5e-66 255.8 205 66.3
AUR62013834 Chenopodium quinoa HOM05D002849 ORTHO05D007186 7.8e-66 254.6 239 57.7
Psat5g001160 Pisum sativum HOM05D002849 ORTHO05D007186 1.5e-53 213.8 155 70.3
Ah.01g004180 Amaranthus hybridus HOM05D002849 ORTHO05D007186 1.4e-51 207.2 259 49.0
Lj9A176T24 Lonicera japonica HOM05D002849 ORTHO05D007186 4.5e-37 159.1 154 55.2
VMungo1309G1925 Vigna mungo HOM05D002849 ORTHO05D007186 3.8e-36 156.0 237 42.2
Prupe.3G237200 Prunus persica HOM05D002849 ORTHO05D007186 7.4e-32 141.7 85 76.5
CARHR139440 Cardamine hirsuta HOM05D002849 ORTHO05D007186 6.1e-26 122.1 62 90.3
MELO3C004787.2 Cucumis melo HOM05D002849 ORTHO05D007186 2.5e-24 116.7 74 78.4
MELO3C012882.2 Cucumis melo HOM05D002849 ORTHO05D007186 1.2e-21 107.8 77 68.8
FAN08G3136 Fragaria x ananassa HOM05D002849 ORTHO05D007186 3.4e-21 106.3 52 94.2
Peaxi162Scf00445g00105 Petunia axillaris HOM05D002849 ORTHO05D007186 1.3e-20 104.4 101 55.4
ATR0661G077 Amborella trichopoda HOM05D002849 ORTHO05D007186 2.1e-18 97.1 50 90.0
HanXRQChr17g0533371 Helianthus annuus HOM05D002849 ORTHO05D007186 4.6e-18 95.9 51 84.3
Peaxi162Scf00166g00633 Petunia axillaris HOM05D002849 ORTHO05D007186 1.8e-17 94.0 48 89.6
MELO3C034170.2 Cucumis melo HOM05D002849 ORTHO05D007186 1.5e-16 90.9 57 73.7
MELO3C003855.2 Cucumis melo HOM05D002849 ORTHO05D007186 7.4e-16 88.6 60 70.0
SpUn0523_0010 Schrenkiella parvula HOM05D002849 ORTHO05D007186 1.0e-09 68.2 33 90.9
SalBow6G3808 Salvia bowleyana HOM05D002849 ORTHO05D007186 6.7e-09 65.5 36 83.3
AL7G13010 Arabidopsis lyrata HOM05D002849 ORTHO05D007186 1.5e-08 64.3 34 73.5


User provided reference genes

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