Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G207800 Glycine max HOM05D006329 ORTHO05D008357 8.1e-222 773.5 400 100.0
Phvul.007G098900 Phaseolus vulgaris HOM05D006329 ORTHO05D008357 2.1e-190 669.1 408 86.0
Lj5g0015116 Lotus japonicus HOM05D006329 ORTHO05D008357 1.1e-159 567.0 413 73.4
TPR.G10288 Trifolium pratense HOM05D006329 ORTHO05D008357 1.5e-159 566.6 404 75.0
arahy.Tifrunner.gnm1.ann1.KFTR8M Arachis hypogaea HOM05D006329 ORTHO05D008357 5.3e-157 558.1 420 72.4
Ca_10544_v3 Cicer arietinum L. HOM05D006329 ORTHO05D008357 2.0e-156 556.2 403 75.2
Medtr1g094190 Medicago truncatula HOM05D006329 ORTHO05D008357 3.5e-156 555.4 404 74.8
Psat6g180040 Pisum sativum HOM05D006329 ORTHO05D008357 4.2e-154 548.5 405 73.3
arahy.Tifrunner.gnm1.ann1.21BGD2 Arachis hypogaea HOM05D006329 ORTHO05D008357 5.9e-148 528.1 410 70.5
VMungo0251G3605 Vigna mungo HOM05D006329 ORTHO05D008357 1.9e-146 523.1 327 83.2
Lalb_Chr21g0313671 Lupinus albus HOM05D006329 ORTHO05D008357 1.4e-144 516.9 416 68.3
MD07G1170000 Malus domestica HOM05D006329 ORTHO05D008357 8.3e-142 507.7 405 67.9
QL08p054507 Quercus lobata HOM05D006329 ORTHO05D008357 1.6e-140 503.4 410 68.5
FAN10G3782 Fragaria x ananassa HOM05D006329 ORTHO05D008357 2.2e-139 499.6 401 66.8
RcHm_v2.0_Chr1g0362601 Rosa chinensis HOM05D006329 ORTHO05D008357 2.2e-139 499.6 396 66.2
QL08p054383 Quercus lobata HOM05D006329 ORTHO05D008357 1.1e-138 497.3 410 67.8
Sed0004104 Sechium edule HOM05D006329 ORTHO05D008357 5.5e-138 495.0 412 64.1
FvH4_7g18810 Fragaria vesca HOM05D006329 ORTHO05D008357 3.6e-137 492.3 400 67.8
FAN10G0068 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.0e-136 490.7 401 66.1
Actinidia34805 Actinidia chinensis HOM05D006329 ORTHO05D008357 1.4e-136 490.3 402 67.2
Duzib114G0755 Durio zibethinus HOM05D006329 ORTHO05D008357 1.4e-136 490.3 419 64.7
Gohir.A10G203300 Gossypium hirsutum HOM05D006329 ORTHO05D008357 1.8e-136 490.0 390 66.9
Gohir.D10G211400 Gossypium hirsutum HOM05D006329 ORTHO05D008357 5.2e-136 488.4 390 66.4
Gorai.011G237100 Gossypium raimondii HOM05D006329 ORTHO05D008357 5.2e-136 488.4 390 66.4
Potri.008G035500 Populus trichocarpa HOM05D006329 ORTHO05D008357 6.8e-136 488.0 369 68.0
Nitab4.5_0001659g0150 Nicotiana tabacum HOM05D006329 ORTHO05D008357 1.2e-135 487.3 420 63.8
FAN06G3910 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.5e-135 486.9 400 67.0
Nitab4.5_0001450g0040 Nicotiana tabacum HOM05D006329 ORTHO05D008357 1.5e-135 486.9 415 64.1
Prupe.2G208900 Prunus persica HOM05D006329 ORTHO05D008357 1.5e-135 486.9 407 66.3
PGR142G3823 Punica granatum HOM05D006329 ORTHO05D008357 2.0e-135 486.5 415 64.6
Atru.chr12.838 Acer truncatum HOM05D003507 ORTHO05D008357 2.6e-135 486.1 394 64.0
Cc02_g10940 Coffea canephora HOM05D006329 ORTHO05D008357 8.3e-134 481.1 381 65.9
CsaV3_6G036680 Cucumis sativus L. HOM05D006329 ORTHO05D008357 1.4e-133 480.3 412 62.6
COL.COLO4_17136 Corchorus olitorius HOM05D006329 ORTHO05D008357 1.8e-133 479.9 413 63.2
PGSC0003DMG400007434 Solanum tuberosum HOM05D006329 ORTHO05D008357 2.4e-133 479.6 424 62.7
Sabra08G0023700 Salix brachista HOM05D006329 ORTHO05D008357 3.1e-133 479.2 369 67.5
MELO3C019822.2 Cucumis melo HOM05D006329 ORTHO05D008357 5.4e-133 478.4 410 64.6
Solyc11g008360.3 Solanum lycopersicum HOM05D006329 ORTHO05D008357 7.0e-133 478.0 426 62.4
Thecc.10G083200 Theobroma cacao HOM05D006329 ORTHO05D008357 9.2e-133 477.6 379 66.8
Ciclev10031516m.g Citrus clementina HOM05D006329 ORTHO05D008357 1.2e-132 477.2 379 66.2
THA.LOC104824234 Tarenaya hassleriana HOM05D006329 ORTHO05D008357 1.0e-131 474.2 396 64.6
Manes.05G201000 Manihot esculenta HOM05D006329 ORTHO05D008357 1.3e-131 473.8 421 61.0
Thhalv10016747m.g Eutrema salsugineum HOM05D006329 ORTHO05D008357 5.6e-130 468.4 384 63.5
BcaB02g09141 Brassica carinata HOM05D006329 ORTHO05D008357 2.8e-129 466.1 405 62.2
AL4G36440 Arabidopsis lyrata HOM05D006329 ORTHO05D008357 4.7e-129 465.3 414 61.4
SalBow6G7241 Salvia bowleyana HOM05D006329 ORTHO05D008357 4.7e-129 465.3 406 62.3
TAR623G1379 Trochodendron aralioides HOM05D006329 ORTHO05D008357 4.7e-129 465.3 418 62.0
FAN06G0494 Fragaria x ananassa HOM05D006329 ORTHO05D008357 8.0e-129 464.5 405 64.9
CARHR133910 Cardamine hirsuta HOM05D006329 ORTHO05D008357 1.8e-128 463.4 389 64.0
CANSAT56G2601 Cannabis sativa HOM05D006329 ORTHO05D008357 3.0e-128 462.6 410 63.9
CiPaw.01G268700 Carya illinoinensis HOM05D006329 ORTHO05D008357 8.9e-128 461.1 417 61.6
MBI18_g02633_MAGBIO Magnolia biondii HOM05D006329 ORTHO05D008357 2.0e-127 459.9 375 64.0
Eucgr.G02867 Eucalyptus grandis HOM05D006329 ORTHO05D008357 3.4e-127 459.1 335 70.4
Sp4g21490 Schrenkiella parvula HOM05D006329 ORTHO05D008357 3.4e-127 459.1 409 61.4
AT2G39140 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 4.4e-127 458.8 412 60.4
Haze_16856 Corylus avellana HOM05D006329 ORTHO05D008357 5.7e-127 458.4 352 67.6
Hma1.2p1_2894F.1_g329960 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 5.7e-127 458.4 415 60.7
Nn6g35280 Nelumbo nucifera HOM05D006329 ORTHO05D008357 1.7e-126 456.8 389 63.5
ClCG08G007690 Citrullus lanatus HOM05D006329 ORTHO05D008357 2.2e-126 456.4 392 64.8
Carub.0004s2119 Capsella rubella HOM05D006329 ORTHO05D008357 9.2e-125 451.1 386 62.2
MSTRG.389 Avicennia marina HOM05D006329 ORTHO05D008357 1.2e-124 450.7 408 60.0
Aqoxy1G01144 Aquilegia oxysepala HOM05D006329 ORTHO05D008357 4.6e-124 448.7 415 59.8
Migut.F01702 Erythranthe guttata HOM05D006329 ORTHO05D008357 2.3e-123 446.4 401 60.6
PSO063G6532 Papaver somniferum HOM05D006329 ORTHO05D008357 3.0e-123 446.0 400 59.8
PSO339G5012 Papaver somniferum HOM05D006329 ORTHO05D008357 3.0e-123 446.0 400 59.5
A05p07160 Brassica napus HOM05D006329 ORTHO05D008357 1.5e-122 443.7 400 60.8
BraA05t19681Z Brassica rapa HOM05D006329 ORTHO05D008357 4.3e-122 442.2 400 60.5
HanXRQChr14g0456591 Helianthus annuus HOM05D006329 ORTHO05D008357 1.6e-121 440.3 290 75.2
Zm00001eb004240 Zea mays HOM05D006329 ORTHO05D008357 2.1e-121 439.9 407 58.7
CDE03G0204 Ceratophyllum demersum HOM05D006329 ORTHO05D008357 4.7e-121 438.7 379 61.2
Oeu013841.1 Olea europaea HOM05D006329 ORTHO05D008357 1.4e-120 437.2 377 63.4
Lsat_1_v5_gn_2_113040 Lactuca sativa HOM05D006329 ORTHO05D008357 3.1e-120 436.0 297 73.4
Sopen11g004170 Solanum pennellii HOM05D006329 ORTHO05D008357 1.5e-119 433.7 309 71.8
Cpa.g.sc53.128 Carica papaya HOM05D006329 ORTHO05D008357 3.4e-119 432.6 398 60.1
GSVIVG01016221001 Vitis vinifera HOM05D006329 ORTHO05D008357 6.4e-118 428.3 296 73.3
Rhsim09G0148200 Rhododendron simsii HOM05D000461 ORTHO05D001829 8.3e-118 427.9 410 58.0
FAN03G2323 Fragaria x ananassa HOM05D003507 ORTHO05D004324 1.1e-117 427.6 317 70.3
BolC4t22452H Brassica oleracea HOM05D006329 ORTHO05D008357 1.4e-117 427.2 335 65.7
Peaxi162Scf00145g01311 Petunia axillaris HOM05D006329 ORTHO05D008357 1.4e-117 427.2 379 63.3
SGA_v2.0_scaffold51G18714 Striga asiatica HOM05D006329 ORTHO05D008357 1.9e-117 426.8 389 60.7
BcaC02g12042 Brassica carinata HOM05D006329 ORTHO05D008357 3.2e-117 426.0 335 65.7
C04p08570 Brassica napus HOM05D006329 ORTHO05D008357 3.2e-117 426.0 335 65.7
Ah.02g128110 Amaranthus hybridus HOM05D006329 ORTHO05D008357 3.3e-114 416.0 335 65.4
Cfa001679 Carpinus fangiana HOM05D006329 ORTHO05D008357 1.6e-113 413.7 291 72.9
ATR0219G015 Amborella trichopoda HOM05D006329 ORTHO05D008357 4.0e-112 409.1 369 59.9
EL10Ac6g14260 Beta vulgaris HOM05D006329 ORTHO05D008357 8.9e-112 407.9 300 68.7
ECA238G1295 Erigeron canadensis HOM05D006329 ORTHO05D001676 1.2e-111 407.5 257 76.3
EL10Ac4g09587 Beta vulgaris HOM05D006329 ORTHO05D008357 1.3e-110 404.1 338 63.6
CAN.G321.64 Capsicum annuum HOM05D006329 ORTHO05D008357 1.7e-110 403.7 251 78.1
HPP92_026018 Vanilla planifolia HOM05D006329 ORTHO05D008357 7.1e-109 398.3 361 59.3
vmacro04842 Vaccinium macrocarpon HOM05D006329 ORTHO05D008357 2.1e-108 396.7 395 58.0
DCAR_005490 Daucus carota HOM05D006329 ORTHO05D008357 6.0e-108 395.2 373 59.8
CSS0005771 Camellia sinensis var. sinensis HOM05D006329 ORTHO05D008357 4.7e-105 385.6 402 56.0
Os03g0152700 Oryza sativa ssp. japonica HOM05D006329 ORTHO05D008357 8.1e-105 384.8 337 62.9
HPP92_027741 Vanilla planifolia HOM05D006329 ORTHO05D008357 3.2e-101 372.9 316 63.6
Hund20700 Selenicereus undatus HOM05D006329 ORTHO05D008357 7.1e-101 371.7 442 50.2
Lalb_Chr21g0313541 Lupinus albus HOM05D006329 ORTHO05D008357 5.1e-99 365.5 210 83.8
Dinv31231 Davidia involucrata HOM05D006329 ORTHO05D008357 3.3e-98 362.8 321 62.6
RhsimUnG0185600 Rhododendron simsii HOM05D000461 ORTHO05D001829 1.8e-96 357.1 375 55.7
AUR62002759 Chenopodium quinoa HOM05D006329 ORTHO05D008357 1.1e-93 347.8 278 65.5
Lj3A938T44 Lonicera japonica HOM05D006329 ORTHO05D008357 9.3e-93 344.7 382 54.5
Mapoly0002s0007 Marchantia polymorpha HOM05D006329 ORTHO05D008357 6.2e-89 332.0 267 61.0
Pp3c7_13640 Physcomitrium patens HOM05D006329 ORTHO05D008357 5.1e-83 312.4 272 59.6
Aa31LG5G20460 Aethionema arabicum HOM05D006329 ORTHO05D008357 1.1e-82 311.2 344 52.6
Cfa001678 Carpinus fangiana HOM05D006329 ORTHO05D008357 1.9e-82 310.5 231 69.7
SMO329G0071 Selaginella moellendorffii HOM05D006329 ORTHO05D008357 4.0e-80 302.8 252 59.5
Sc09g0006060 Simmondsia chinensis HOM05D006329 ORTHO05D008357 7.1e-69 265.4 260 57.3
FAN01G2166 Fragaria x ananassa HOM05D006329 ORTHO05D008357 1.9e-66 257.3 197 68.0
HPP92_026744 Vanilla planifolia HOM05D006329 ORTHO05D008357 5.1e-59 232.6 266 52.6
CBR_g29624 Chara braunii HOM05D006329 ORTHO05D008357 5.5e-53 212.6 205 54.1
MCO14G528 Micromonas commoda HOM05D006329 ORTHO05D008357 4.1e-48 196.4 252 44.0
Cre02.g095121 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 8.5e-46 188.7 330 37.9
PRCOL_00004574 Prasinoderma coloniale HOM05D006329 ORTHO05D008357 1.5e-42 177.9 253 41.1
AUR62014125 Chenopodium quinoa HOM05D006329 ORTHO05D008357 1.8e-40 171.0 183 54.6
CAN.G176.13 Capsicum annuum HOM05D006329 ORTHO05D033978 6.5e-30 136.0 83 75.9
Hma1.2p1_2894F.1_g329970 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 5.5e-29 132.9 82 75.6
Pp3s196_90 Physcomitrium patens HOM05D006329 ORTHO05D008357 8.0e-28 129.0 247 32.8
AT3G43340 Arabidopsis thaliana HOM05D006329 ORTHO05D008357 1.1e-21 108.6 74 71.6
Hma1.2p1_2894F.1_g329973 Hydrangea macrophylla HOM05D006329 ORTHO05D008357 1.0e-19 102.1 61 77.0
Glyma.20G182966 Glycine max HOM05D006329 ORTHO05D028485 2.0e-18 97.8 88 62.5
Cre07.g323550 Chlamydomonas reinhardtii HOM05D006329 ORTHO05D008357 2.7e-15 87.4 232 31.5
Lalb_Chr21g0313531 Lupinus albus HOM05D006329 ORTHO05D008357 1.2e-12 78.6 103 48.5
MCO04G216 Micromonas commoda HOM05D006329 ORTHO05D008357 1.0e-11 75.5 260 27.7
CAN.G184.4 Capsicum annuum HOM05D006329 ORTHO05D028485 1.4e-11 75.1 70 57.1
Glyma.20G183032 Glycine max HOM05D006329 ORTHO05D213530 8.3e-09 65.9 68 66.2
Potri.010G226901 Populus trichocarpa HOM05D006329 ORTHO05D028485 3.5e-07 60.5 51 60.8
PRCOL_00006422 Prasinoderma coloniale HOM05D006329 ORTHO05D008357 8.6e-06 55.8 143 28.0


User provided reference genes

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