Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.08G239201 Glycine max HOM05D005687 ORTHO05D007098 5.7e-65 250.8 126 100.0
Glyma.12G001400 Glycine max HOM05D005687 ORTHO05D007098 1.3e-61 239.6 125 96.0
Lj3g0026050 Lotus japonicus HOM05D005687 ORTHO05D007098 8.6e-61 236.9 125 93.6
Ca_19701_v3 Cicer arietinum L. HOM05D005687 ORTHO05D007098 3.3e-60 235.0 125 92.8
TPR.G34137 Trifolium pratense HOM05D005687 ORTHO05D007098 3.3e-60 235.0 125 92.8
Psat7g144520 Pisum sativum HOM05D005687 ORTHO05D007098 4.2e-60 234.6 125 92.0
Medtr4g033210 Medicago truncatula HOM05D005687 ORTHO05D007098 5.6e-60 234.2 125 92.0
Phvul.011G001500 Phaseolus vulgaris HOM05D005687 ORTHO05D007098 5.6e-60 234.2 125 94.4
VMungo1127G0635 Vigna mungo HOM05D005687 ORTHO05D007098 5.6e-60 234.2 125 94.4
arahy.Tifrunner.gnm1.ann1.BDG91C Arachis hypogaea HOM05D005687 ORTHO05D007098 3.6e-59 231.5 125 92.0
EL10Ac1g00122 Beta vulgaris HOM05D005687 ORTHO05D007098 1.0e-58 229.9 125 88.0
arahy.Tifrunner.gnm1.ann1.H6WZRG Arachis hypogaea HOM05D005687 ORTHO05D007098 3.0e-58 228.4 125 90.4
CANSAT35G0683 Cannabis sativa HOM05D005687 ORTHO05D007098 6.8e-58 227.3 125 87.2
CsaV3_5G040460 Cucumis sativus L. HOM05D005687 ORTHO05D007098 8.9e-58 226.9 125 87.2
GSVIVG01034468001 Vitis vinifera HOM05D005687 ORTHO05D007098 8.9e-58 226.9 125 87.2
MD08G1219300 Malus domestica HOM05D005687 ORTHO05D007098 1.2e-57 226.5 125 87.2
PGSC0003DMG401009270 Solanum tuberosum HOM05D005687 ORTHO05D007098 1.5e-57 226.1 125 87.2
MELO3C022220.2 Cucumis melo HOM05D005687 ORTHO05D007098 2.0e-57 225.7 125 86.4
Peaxi162Scf00391g00732 Petunia axillaris HOM05D005687 ORTHO05D007098 2.0e-57 225.7 125 87.2
Sc01g0001920 Simmondsia chinensis HOM05D005687 ORTHO05D007098 2.0e-57 225.7 125 86.4
Sopen11g011260 Solanum pennellii HOM05D005687 ORTHO05D007098 2.0e-57 225.7 125 87.2
AUR62004616 Chenopodium quinoa HOM05D005687 ORTHO05D007098 2.6e-57 225.3 125 86.4
AUR62022645 Chenopodium quinoa HOM05D005687 ORTHO05D007098 2.6e-57 225.3 125 86.4
Nitab4.5_0001534g0050 Nicotiana tabacum HOM05D005687 ORTHO05D007098 2.6e-57 225.3 125 86.4
Nitab4.5_0003826g0010 Nicotiana tabacum HOM05D005687 ORTHO05D007098 2.6e-57 225.3 125 86.4
Solyc11g022390.2 Solanum lycopersicum HOM05D005687 ORTHO05D007098 3.4e-57 224.9 125 86.4
Cpa.g.sc66.10 Carica papaya HOM05D005687 ORTHO05D007098 4.4e-57 224.6 125 87.2
ClCG08G000280 Citrullus lanatus HOM05D005687 ORTHO05D007098 4.4e-57 224.6 125 85.6
Lalb_Chr19g0140501 Lupinus albus HOM05D005687 ORTHO05D007098 4.4e-57 224.6 125 88.8
Prupe.1G553700 Prunus persica HOM05D005687 ORTHO05D007098 5.7e-57 224.2 125 86.4
Hund16781 Selenicereus undatus HOM05D005687 ORTHO05D007098 5.7e-57 224.2 125 86.4
CAN.G155.2 Capsicum annuum HOM05D005687 ORTHO05D007098 7.5e-57 223.8 125 85.6
CARHR064900 Cardamine hirsuta HOM05D005687 ORTHO05D007098 7.5e-57 223.8 125 84.0
Gohir.A05G273000 Gossypium hirsutum HOM05D005687 ORTHO05D007098 7.5e-57 223.8 125 86.4
Lsat_1_v5_gn_1_12201 Lactuca sativa HOM05D005687 ORTHO05D007098 7.5e-57 223.8 125 86.4
ECA247G1762 Erigeron canadensis HOM05D005687 ORTHO05D007098 9.8e-57 223.4 125 85.6
Gohir.D05G275400 Gossypium hirsutum HOM05D005687 ORTHO05D007098 9.8e-57 223.4 125 86.4
Gorai.009G288500 Gossypium raimondii HOM05D005687 ORTHO05D007098 9.8e-57 223.4 125 86.4
RcHm_v2.0_Chr7g0228031 Rosa chinensis HOM05D005687 ORTHO05D007098 9.8e-57 223.4 125 86.4
AL2G31710 Arabidopsis lyrata HOM05D005687 ORTHO05D007098 1.3e-56 223.0 125 84.0
AT1G72090 Arabidopsis thaliana HOM05D005687 ORTHO05D007098 1.3e-56 223.0 125 84.0
Carub.0002s1887 Capsella rubella HOM05D005687 ORTHO05D007098 1.3e-56 223.0 125 84.0
COL.COLO4_15121 Corchorus olitorius HOM05D005687 ORTHO05D007098 1.3e-56 223.0 125 85.6
Haze_21291 Corylus avellana HOM05D005687 ORTHO05D007098 2.2e-56 222.2 125 87.2
FvH4_5g32030 Fragaria vesca HOM05D005687 ORTHO05D007098 2.2e-56 222.2 125 85.6
FAN08G1133 Fragaria x ananassa HOM05D005687 ORTHO05D007098 2.2e-56 222.2 125 85.6
FAN18G2804 Fragaria x ananassa HOM05D005687 ORTHO05D007098 2.2e-56 222.2 125 85.6
HanXRQChr02g0044211 Helianthus annuus HOM05D005687 ORTHO05D007098 2.2e-56 222.2 125 85.6
Os04g0434300 Oryza sativa ssp. japonica HOM05D005687 ORTHO05D007098 2.2e-56 222.2 125 85.6
Thecc.08G189500 Theobroma cacao HOM05D005687 ORTHO05D007098 2.2e-56 222.2 125 86.4
Dinv41744 Davidia involucrata HOM05D005687 ORTHO05D007098 2.9e-56 221.9 125 85.6
PGR042G3796 Punica granatum HOM05D005687 ORTHO05D007098 2.9e-56 221.9 125 84.8
unitig_32.g11184 Utricularia gibba HOM05D001035 ORTHO05D007098 2.9e-56 221.9 125 85.6
Eucgr.F03000 Eucalyptus grandis HOM05D005687 ORTHO05D007098 3.7e-56 221.5 125 84.8
Manes.18G104200 Manihot esculenta HOM05D005687 ORTHO05D007098 3.7e-56 221.5 125 84.8
Potri.013G107800 Populus trichocarpa HOM05D005687 ORTHO05D007098 3.7e-56 221.5 125 84.8
Sed0023668 Sechium edule HOM05D005687 ORTHO05D007098 3.7e-56 221.5 125 84.0
BcaB03g14944 Brassica carinata HOM05D005687 ORTHO05D007098 4.9e-56 221.1 125 83.2
CiPaw.08G002200 Carya illinoinensis HOM05D005687 ORTHO05D007098 4.9e-56 221.1 125 87.2
A07p38240 Brassica napus HOM05D005687 ORTHO05D007098 6.4e-56 220.7 125 83.2
BraA07t31389Z Brassica rapa HOM05D005687 ORTHO05D007098 6.4e-56 220.7 125 83.2
Thhalv10018307m.g Eutrema salsugineum HOM05D005687 ORTHO05D007098 6.4e-56 220.7 125 83.2
Sabra13G0093200 Salix brachista HOM05D005687 ORTHO05D007098 6.4e-56 220.7 125 84.8
Ciclev10000582m.g Citrus clementina HOM05D005687 ORTHO05D007098 8.3e-56 220.3 125 84.8
Hma1.2p1_0004F.1_g003990 Hydrangea macrophylla HOM05D005687 ORTHO05D007098 8.3e-56 220.3 125 84.0
Hma1.2p1_0004F.1_g004000 Hydrangea macrophylla HOM05D005687 ORTHO05D007098 8.3e-56 220.3 125 84.0
Lj7A623G45 Lonicera japonica HOM05D005687 ORTHO05D007098 8.3e-56 220.3 125 85.6
MD15G1407900 Malus domestica HOM05D005687 ORTHO05D007098 8.3e-56 220.3 125 85.6
Cfa012938 Carpinus fangiana HOM05D005687 ORTHO05D007098 1.1e-55 219.9 125 86.4
SGA_v2.0_scaffold118G32517 Striga asiatica HOM05D005687 ORTHO05D007098 1.1e-55 219.9 125 84.0
THA.LOC104800128 Tarenaya hassleriana HOM05D005687 ORTHO05D007098 1.1e-55 219.9 125 82.4
vmacro00992 Vaccinium macrocarpon HOM05D005687 ORTHO05D007098 1.1e-55 219.9 125 83.2
Zm00001eb422680 Zea mays HOM05D005687 ORTHO05D007098 1.1e-55 219.9 125 84.8
BcaC08g46660 Brassica carinata HOM05D005687 ORTHO05D007098 1.4e-55 219.5 125 81.6
C06p46310 Brassica napus HOM05D005687 ORTHO05D007098 1.4e-55 219.5 125 82.4
BolC6t39676H Brassica oleracea HOM05D005687 ORTHO05D007098 1.4e-55 219.5 125 81.6
DCAR_017367 Daucus carota HOM05D005687 ORTHO05D007098 1.4e-55 219.5 125 83.2
Actinidia01555 Actinidia chinensis HOM05D005687 ORTHO05D007098 1.8e-55 219.2 125 83.2
Migut.C01307 Erythranthe guttata HOM05D005687 ORTHO05D007098 1.8e-55 219.2 125 84.8
PSO017G1535 Papaver somniferum HOM05D005687 ORTHO05D007098 1.8e-55 219.2 125 84.0
FAN04G0407 Fragaria x ananassa HOM05D005687 ORTHO05D007098 2.4e-55 218.8 125 84.8
Nn5g27549 Nelumbo nucifera HOM05D005687 ORTHO05D007098 2.4e-55 218.8 125 83.2
PSO170G1542 Papaver somniferum HOM05D005687 ORTHO05D007098 2.4e-55 218.8 125 83.2
Aqoxy5G02668 Aquilegia oxysepala HOM05D005687 ORTHO05D007098 3.2e-55 218.4 125 82.4
Cc10_g10120 Coffea canephora HOM05D005687 ORTHO05D007098 3.2e-55 218.4 125 83.2
Sp5g27150 Schrenkiella parvula HOM05D005687 ORTHO05D007098 4.1e-55 218.0 125 81.6
Atru.chr13.2348 Acer truncatum HOM05D005687 ORTHO05D007098 5.4e-55 217.6 125 82.4
Aa31LG4G8560 Aethionema arabicum HOM05D005687 ORTHO05D007098 5.4e-55 217.6 125 81.6
CSS0035020 Camellia sinensis var. sinensis HOM05D005687 ORTHO05D007098 5.4e-55 217.6 125 82.4
CSS0048983 Camellia sinensis var. sinensis HOM05D005687 ORTHO05D007098 5.4e-55 217.6 125 82.4
QL02p026060 Quercus lobata HOM05D005687 ORTHO05D007098 5.4e-55 217.6 125 84.8
TAR376G0067 Trochodendron aralioides HOM05D005687 ORTHO05D007098 5.4e-55 217.6 125 82.4
HPP92_016134 Vanilla planifolia HOM05D005687 ORTHO05D007098 5.4e-55 217.6 125 83.2
CDE06G1536 Ceratophyllum demersum HOM05D005687 ORTHO05D007098 9.2e-55 216.9 125 83.2
TWI59G0019 Tripterygium wilfordii HOM05D005687 ORTHO05D007098 9.2e-55 216.9 125 84.8
SalBow6G3036 Salvia bowleyana HOM05D005687 ORTHO05D007098 1.2e-54 216.5 125 82.4
SEGI_17032 Sequoiadendron giganteum HOM05D005687 ORTHO05D007098 1.2e-54 216.5 125 80.8
ATR1134G072 Amborella trichopoda HOM05D005687 ORTHO05D007098 5.9e-54 214.2 125 81.6
MSTRG.1558 Avicennia marina HOM05D005687 ORTHO05D007098 2.3e-53 212.2 125 80.8
C06p46220 Brassica napus HOM05D005687 ORTHO05D007098 6.6e-53 210.7 126 81.0
Mapoly0002s0019 Marchantia polymorpha HOM05D005687 ORTHO05D007098 6.6e-53 210.7 125 80.8
SGA_v2.0_scaffold118G32527 Striga asiatica HOM05D005687 ORTHO05D007098 4.3e-52 208.0 125 80.0
Pp3c6_10380 Physcomitrium patens HOM05D005687 ORTHO05D007098 1.2e-51 206.5 125 77.6
Glyma.02G018600 Glycine max HOM05D005687 ORTHO05D007098 2.1e-51 205.7 125 81.6
CBR_g25878 Chara braunii HOM05D005687 ORTHO05D007098 8.0e-51 203.8 125 76.8
AagrBONN_evm.TU.Sc2ySwM_344.3251 Anthoceros agrestis HOM05D005687 ORTHO05D007098 4.6e-46 188.0 125 69.6
MCO07G120 Micromonas commoda HOM05D005687 ORTHO05D007098 1.5e-41 172.9 125 63.2
SMO116G0266 Selaginella moellendorffii HOM05D005687 ORTHO05D007098 9.8e-41 170.2 125 64.8
Cre03.g149300 Chlamydomonas reinhardtii HOM05D005687 ORTHO05D007098 1.2e-38 163.3 123 61.8
PRCOL_00002733 Prasinoderma coloniale HOM05D005687 ORTHO05D007098 9.5e-36 153.7 125 58.4
SMO306G0020 Selaginella moellendorffii HOM05D005687 ORTHO05D007098 5.8e-33 144.4 125 60.0
SMO270G0133 Selaginella moellendorffii HOM05D005687 ORTHO05D007098 8.4e-32 140.6 125 58.4
SMO270G0057 Selaginella moellendorffii HOM05D005687 ORTHO05D007098 4.1e-31 138.3 74 83.8
SMO306G0012 Selaginella moellendorffii HOM05D014392 ORTHO05D011519 1.7e-21 106.3 54 83.3
QL08p020799 Quercus lobata HOM05D005687 ORTHO05D007098 2.7e-14 82.4 79 51.9


User provided reference genes

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