Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.01G067300 Glycine max HOM05D000228 ORTHO05D213372 1.4e-107 392.9 192 100.0
Glyma.09G278900 Glycine max HOM05D000228 ORTHO05D001545 7.7e-53 211.1 159 71.7
Prupe.7G175200 Prunus persica HOM05D000228 ORTHO05D001545 4.7e-50 201.8 156 68.6
Phvul.002G104500 Phaseolus vulgaris HOM05D000228 ORTHO05D001545 7.9e-50 201.1 159 68.6
Glyma.01G162200 Glycine max HOM05D000228 ORTHO05D001545 1.8e-49 199.9 159 67.9
Glyma.11G081200 Glycine max HOM05D000228 ORTHO05D001545 1.8e-49 199.9 159 67.9
MD15G1237200 Malus domestica HOM05D000228 ORTHO05D001545 1.8e-49 199.9 159 66.0
VMungo1215G1821 Vigna mungo HOM05D000228 ORTHO05D001545 1.8e-49 199.9 187 61.5
Lalb_Chr09g0321431 Lupinus albus HOM05D000228 ORTHO05D001545 2.3e-49 199.5 179 62.6
FAN28G2440 Fragaria x ananassa HOM05D000228 ORTHO05D001545 3.0e-49 199.1 185 60.0
TPR.G25137 Trifolium pratense HOM05D000228 ORTHO05D001545 5.1e-49 198.4 159 67.3
ClCG10G000460 Citrullus lanatus HOM05D000228 ORTHO05D001545 6.7e-49 198.0 185 60.0
Lalb_Chr17g0338781 Lupinus albus HOM05D000228 ORTHO05D001545 6.7e-49 198.0 175 62.3
MD02G1123400 Malus domestica HOM05D000228 ORTHO05D001545 8.8e-49 197.6 159 65.4
Atru.chr3.909 Acer truncatum HOM05D000228 ORTHO05D001545 1.1e-48 197.2 159 66.7
Medtr5g023020 Medicago truncatula HOM05D000228 ORTHO05D001545 1.1e-48 197.2 159 66.7
RcHm_v2.0_Chr2g0098321 Rosa chinensis HOM05D000228 ORTHO05D001545 1.1e-48 197.2 185 59.5
MELO3C013741.2 Cucumis melo HOM05D000228 ORTHO05D001545 1.5e-48 196.8 185 59.5
Lj2g0016023 Lotus japonicus HOM05D000228 ORTHO05D001545 2.0e-48 196.4 159 66.7
Cpa.g.sc6.315 Carica papaya HOM05D000228 ORTHO05D001545 3.3e-48 195.7 159 65.4
CiPaw.07G063400 Carya illinoinensis HOM05D000228 ORTHO05D001545 5.7e-48 194.9 159 66.0
CsaV3_3G000490 Cucumis sativus L. HOM05D000228 ORTHO05D001545 7.4e-48 194.5 185 58.9
Cfa007031 Carpinus fangiana HOM05D000228 ORTHO05D001545 1.3e-47 193.7 159 65.4
Gohir.A02G174500 Gossypium hirsutum HOM05D000228 ORTHO05D001545 1.3e-47 193.7 159 65.4
Gorai.003G005700 Gossypium raimondii HOM05D000228 ORTHO05D001545 1.3e-47 193.7 159 65.4
Ca_24944_v3 Cicer arietinum L. HOM05D000228 ORTHO05D001545 1.7e-47 193.4 161 66.5
Gohir.D11G178600 Gossypium hirsutum HOM05D000228 ORTHO05D001545 1.7e-47 193.4 159 65.4
Manes.01G151000 Manihot esculenta HOM05D000228 ORTHO05D001545 1.7e-47 193.4 179 59.8
COL.COLO4_22497 Corchorus olitorius HOM05D000228 ORTHO05D001545 2.2e-47 193.0 159 65.4
Duzib187G1668 Durio zibethinus HOM05D000228 ORTHO05D001545 2.2e-47 193.0 159 65.4
TAR628G0489 Trochodendron aralioides HOM05D000228 ORTHO05D001545 2.2e-47 193.0 185 58.9
HPP92_014402 Vanilla planifolia HOM05D000228 ORTHO05D001545 2.2e-47 193.0 184 58.2
EL10Ac6g13333 Beta vulgaris HOM05D000228 ORTHO05D001545 2.8e-47 192.6 181 59.7
Nn6g31908 Nelumbo nucifera HOM05D000228 ORTHO05D001545 2.8e-47 192.6 179 59.2
Aqoxy5G01098 Aquilegia oxysepala HOM05D000228 ORTHO05D001545 3.7e-47 192.2 179 59.2
CDE04G2464 Ceratophyllum demersum HOM05D000228 ORTHO05D001545 3.7e-47 192.2 185 57.8
Migut.N01734 Erythranthe guttata HOM05D000228 ORTHO05D001545 3.7e-47 192.2 186 59.7
Gohir.A11G171700 Gossypium hirsutum HOM05D000228 ORTHO05D001545 4.8e-47 191.8 159 65.4
Gorai.007G190500 Gossypium raimondii HOM05D000228 ORTHO05D001545 4.8e-47 191.8 159 65.4
TAR376G0725 Trochodendron aralioides HOM05D000228 ORTHO05D001545 4.8e-47 191.8 179 59.8
MBI11_g09467_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D001545 6.3e-47 191.4 185 58.4
Dinv39555 Davidia involucrata HOM05D000228 ORTHO05D001545 8.2e-47 191.0 159 65.4
TWI09G0739 Tripterygium wilfordii HOM05D000228 ORTHO05D001545 8.2e-47 191.0 159 65.4
Ciclev10024686m.g Citrus clementina HOM05D000228 ORTHO05D001545 1.1e-46 190.7 164 63.4
Eucgr.I02304 Eucalyptus grandis HOM05D000228 ORTHO05D001545 1.1e-46 190.7 153 64.7
SGA_v2.0_scaffold116G32283 Striga asiatica HOM05D000228 ORTHO05D001545 1.1e-46 190.7 156 65.4
Actinidia29769 Actinidia chinensis HOM05D000228 ORTHO05D001545 1.4e-46 190.3 159 64.8
Ah.03g134280 Amaranthus hybridus HOM05D000228 ORTHO05D001545 1.4e-46 190.3 185 57.3
Potri.005G107600 Populus trichocarpa HOM05D000228 ORTHO05D001545 1.4e-46 190.3 159 64.8
THA.LOC104804281 Tarenaya hassleriana HOM05D000228 ORTHO05D001545 1.4e-46 190.3 159 63.5
Dinv31892 Davidia involucrata HOM05D000228 ORTHO05D001545 1.8e-46 189.9 179 60.3
MBI19_g46471_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D001545 1.8e-46 189.9 185 57.8
CAN.G890.26 Capsicum annuum HOM05D000228 ORTHO05D001545 2.4e-46 189.5 185 57.8
Peaxi162Scf00328g00128 Petunia axillaris HOM05D000228 ORTHO05D001545 2.4e-46 189.5 185 57.3
Sabra05G0088100 Salix brachista HOM05D000228 ORTHO05D001545 2.4e-46 189.5 159 64.2
Thecc.01G011300 Theobroma cacao HOM05D000228 ORTHO05D001545 2.4e-46 189.5 159 64.2
PSO541G3277 Papaver somniferum HOM05D000228 ORTHO05D001545 3.1e-46 189.1 185 56.8
PSO675G5068 Papaver somniferum HOM05D000228 ORTHO05D001545 3.1e-46 189.1 185 56.8
Hma1.2p1_1598F.1_g292950 Hydrangea macrophylla HOM05D000228 ORTHO05D001545 5.3e-46 188.3 181 60.8
PGR119G0284 Punica granatum HOM05D000228 ORTHO05D001545 5.3e-46 188.3 159 63.5
Sed0006002 Sechium edule HOM05D000228 ORTHO05D001545 5.3e-46 188.3 185 56.8
Dinv40146 Davidia involucrata HOM05D000228 ORTHO05D001545 7.0e-46 188.0 189 56.6
Sopen02g028130 Solanum pennellii HOM05D000228 ORTHO05D001545 7.0e-46 188.0 185 57.3
PGSC0003DMG400003590 Solanum tuberosum HOM05D000228 ORTHO05D001545 7.0e-46 188.0 185 57.3
SGA_v2.0_scaffold127G34014 Striga asiatica HOM05D000228 ORTHO05D001545 7.0e-46 188.0 178 58.4
FAN26G3056 Fragaria x ananassa HOM05D000228 ORTHO05D001545 9.1e-46 187.6 203 54.7
HanXRQChr04g0107401 Helianthus annuus HOM05D000228 ORTHO05D001545 9.1e-46 187.6 159 64.8
Nitab4.5_0001696g0010 Nicotiana tabacum HOM05D000228 ORTHO05D001545 1.2e-45 187.2 154 64.9
Nitab4.5_0006892g0040 Nicotiana tabacum HOM05D000228 ORTHO05D001545 1.2e-45 187.2 154 64.9
Gohir.D03G005300 Gossypium hirsutum HOM05D000228 ORTHO05D001545 1.5e-45 186.8 164 63.4
ECA247G3915 Erigeron canadensis HOM05D000228 ORTHO05D001545 2.0e-45 186.4 166 62.0
Psat2g151920 Pisum sativum HOM05D000228 ORTHO05D001545 2.6e-45 186.0 148 68.2
FAN23G1904 Fragaria x ananassa HOM05D000228 ORTHO05D001545 5.9e-45 184.9 204 54.4
Sc03g0003780 Simmondsia chinensis HOM05D000228 ORTHO05D001545 5.9e-45 184.9 135 70.4
Haze_03702 Corylus avellana HOM05D000228 ORTHO05D001545 7.7e-45 184.5 170 60.6
Thhalv10024193m.g Eutrema salsugineum HOM05D000228 ORTHO05D001545 7.7e-45 184.5 159 61.6
Os05g0151000 Oryza sativa ssp. japonica HOM05D000228 ORTHO05D001545 7.7e-45 184.5 184 57.1
Sp7g33590 Schrenkiella parvula HOM05D000228 ORTHO05D001545 7.7e-45 184.5 159 62.3
Aa31LG6G12760 Aethionema arabicum HOM05D000228 ORTHO05D001545 1.3e-44 183.7 162 62.3
arahy.Tifrunner.gnm1.ann1.FVA0CM Arachis hypogaea HOM05D000228 ORTHO05D001545 1.7e-44 183.3 182 58.8
ATR0661G313 Amborella trichopoda HOM05D000228 ORTHO05D001545 2.2e-44 183.0 177 58.2
AT4G35800 Arabidopsis thaliana HOM05D000228 ORTHO05D001545 2.9e-44 182.6 171 58.5
BcaC01g00522 Brassica carinata HOM05D000228 ORTHO05D001545 2.9e-44 182.6 159 61.6
CSS0032530 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D001545 2.9e-44 182.6 145 67.6
CDE02G1347 Ceratophyllum demersum HOM05D000228 ORTHO05D001545 2.9e-44 182.6 143 66.4
Zm00001eb416050 Zea mays HOM05D000228 ORTHO05D001545 2.9e-44 182.6 195 52.3
AL7G15270 Arabidopsis lyrata HOM05D000228 ORTHO05D001545 5.0e-44 181.8 159 61.0
Carub.0007s0443 Capsella rubella HOM05D000228 ORTHO05D001545 6.5e-44 181.4 159 61.0
GSVIVG01008740001 Vitis vinifera HOM05D000228 ORTHO05D001545 6.5e-44 181.4 197 54.8
MBI19_g41372_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D001545 1.1e-43 180.6 177 57.6
AUR62026224 Chenopodium quinoa HOM05D000228 ORTHO05D001545 1.9e-43 179.9 187 55.6
AUR62026407 Chenopodium quinoa HOM05D000228 ORTHO05D001545 1.9e-43 179.9 187 55.6
Oeu039718.1 Olea europaea HOM05D000228 ORTHO05D001545 5.5e-43 178.3 159 58.5
SEGI_24851 Sequoiadendron giganteum HOM05D000228 ORTHO05D001545 5.5e-43 178.3 189 55.0
Sopen02g027960 Solanum pennellii HOM05D000228 ORTHO05D001545 5.5e-43 178.3 183 55.7
unitig_0.g552 Utricularia gibba HOM05D000228 ORTHO05D001545 5.5e-43 178.3 135 67.4
CSS0036491 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D001545 7.2e-43 177.9 135 68.1
CARHR244170 Cardamine hirsuta HOM05D000228 ORTHO05D001545 9.4e-43 177.6 159 59.7
MBI05_g01299_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D001545 1.2e-42 177.2 135 68.1
CSS0034780 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D001545 1.6e-42 176.8 152 62.5
BcaNung00792 Brassica carinata HOM05D000228 ORTHO05D001545 2.7e-42 176.0 159 60.4
Actinidia17402 Actinidia chinensis HOM05D000228 ORTHO05D001545 3.6e-42 175.6 159 59.1
A01p02890 Brassica napus HOM05D000228 ORTHO05D001545 3.6e-42 175.6 154 61.0
BraA01t00274Z Brassica rapa HOM05D000315 ORTHO05D001545 3.6e-42 175.6 154 61.0
MD02G1123300 Malus domestica HOM05D000228 ORTHO05D001545 1.0e-41 174.1 156 59.6
C03p80930 Brassica napus HOM05D000228 ORTHO05D001545 3.0e-41 172.6 170 57.1
BcaNung04874 Brassica carinata HOM05D000228 ORTHO05D001545 3.9e-41 172.2 156 59.6
C01p03210 Brassica napus HOM05D000228 ORTHO05D001545 1.1e-40 170.6 154 60.4
FAN19G0156 Fragaria x ananassa HOM05D000228 ORTHO05D001545 1.1e-40 170.6 185 54.6
BcaC07g38102 Brassica carinata HOM05D000228 ORTHO05D001545 1.5e-40 170.2 136 66.2
Pp3c14_14540 Physcomitrium patens HOM05D000228 ORTHO05D001545 4.4e-40 168.7 154 58.4
Eucgr.F01570 Eucalyptus grandis HOM05D000228 ORTHO05D001545 9.7e-40 167.5 162 57.4
SMO203G0153 Selaginella moellendorffii HOM05D000228 ORTHO05D001545 1.3e-39 167.2 153 58.2
Pp3c1_32300 Physcomitrium patens HOM05D000228 ORTHO05D001545 2.2e-39 166.4 154 55.8
Hund16621 Selenicereus undatus HOM05D000228 ORTHO05D001545 2.2e-39 166.4 185 53.0
CBR_g42147 Chara braunii HOM05D000228 ORTHO05D001545 3.7e-39 165.6 153 55.6
DCAR_016740 Daucus carota HOM05D000228 ORTHO05D001545 3.7e-39 165.6 185 53.5
BcaNung05725 Brassica carinata HOM05D000228 ORTHO05D001545 1.8e-38 163.3 149 59.7
Mapoly0070s0048 Marchantia polymorpha HOM05D000228 ORTHO05D001545 2.4e-38 162.9 154 55.2
vmacro20497 Vaccinium macrocarpon HOM05D000228 ORTHO05D001545 2.0e-37 159.8 195 49.2
Lsat_1_v5_gn_1_12220 Lactuca sativa HOM05D000228 ORTHO05D001545 7.7e-37 157.9 159 57.9
vmacro04378 Vaccinium macrocarpon HOM05D000228 ORTHO05D001545 1.7e-36 156.8 159 56.6
arahy.Tifrunner.gnm1.ann1.XNR9AR Arachis hypogaea HOM05D000228 ORTHO05D001545 2.9e-36 156.0 180 52.8
BraA08t34114Z Brassica rapa HOM05D000228 ORTHO05D001545 1.9e-35 153.3 159 55.3
Rhsim10G0205500 Rhododendron simsii HOM05D000228 ORTHO05D001545 4.2e-35 152.1 194 48.5
Psat7g022280 Pisum sativum HOM05D000228 ORTHO05D001545 9.4e-35 151.0 88 81.8
FvH4_1g11070 Fragaria vesca HOM05D000228 ORTHO05D001545 2.1e-34 149.8 184 46.2
Lj4C801G10 Lonicera japonica HOM05D000228 ORTHO05D001545 2.0e-32 143.3 159 52.8
SGA_v2.0_scaffold15G07314 Striga asiatica HOM05D000228 ORTHO05D001545 2.0e-32 143.3 156 53.2
Ah.02g129100 Amaranthus hybridus HOM05D000228 ORTHO05D001545 2.6e-32 142.9 156 52.6
arahy.Tifrunner.gnm1.ann1.BXI6FM Arachis hypogaea HOM05D000228 ORTHO05D001545 1.3e-31 140.6 182 47.3
FAN26G2926 Fragaria x ananassa HOM05D000228 ORTHO05D001545 2.8e-31 139.4 203 41.9
arahy.Tifrunner.gnm1.ann1.FL0A4X Arachis hypogaea HOM05D000228 ORTHO05D001545 4.8e-31 138.7 159 52.2
BcaC01g00521 Brassica carinata HOM05D000315 ORTHO05D001545 4.8e-31 138.7 161 50.9
BolC8t48523H Brassica oleracea HOM05D000228 ORTHO05D001545 4.8e-31 138.7 148 54.7
FAN19G2586 Fragaria x ananassa HOM05D000228 ORTHO05D001545 6.3e-31 138.3 203 41.9
A08p21640 Brassica napus HOM05D000228 ORTHO05D001545 1.4e-30 137.1 148 54.7
BolC3t20350H Brassica oleracea HOM05D000228 ORTHO05D001545 1.4e-30 137.1 148 54.7
Aqoxy5G00747 Aquilegia oxysepala HOM05D000228 ORTHO05D001545 4.1e-30 135.6 180 46.7
arahy.Tifrunner.gnm1.ann1.9K73PE Arachis hypogaea HOM05D000228 ORTHO05D001545 1.6e-29 133.7 159 50.9
FAN23G0813 Fragaria x ananassa HOM05D000228 ORTHO05D001545 2.0e-29 133.3 184 43.5
ECA233G0514 Erigeron canadensis HOM05D000228 ORTHO05D001545 1.3e-28 130.6 178 45.5
ECA233G5495 Erigeron canadensis HOM05D000228 ORTHO05D001545 1.7e-28 130.2 164 47.6
Lj4C226G8 Lonicera japonica HOM05D000228 ORTHO05D001545 1.7e-28 130.2 135 52.6
FAN28G1830 Fragaria x ananassa HOM05D000228 ORTHO05D001545 2.2e-28 129.8 184 42.9
arahy.Tifrunner.gnm1.ann1.J6X5FL Arachis hypogaea HOM05D000228 ORTHO05D001545 5.0e-28 128.6 159 49.7
Actinidia37952 Actinidia chinensis HOM05D000228 ORTHO05D001545 6.5e-28 128.3 114 62.3
ECA233G2080 Erigeron canadensis HOM05D000228 ORTHO05D001545 5.5e-27 125.2 164 46.3
MBI02_g14197_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D001545 8.0e-26 121.3 74 78.4
MCO15G374 Micromonas commoda HOM05D000228 ORTHO05D001545 2.2e-23 113.2 134 41.8
QL06p052087 Quercus lobata HOM05D000228 ORTHO05D001545 2.8e-23 112.8 144 50.0
Cc07_g11330 Coffea canephora HOM05D000228 ORTHO05D001545 1.8e-22 110.2 111 57.7
Cc08_g04860 Coffea canephora HOM05D000228 ORTHO05D001545 1.8e-22 110.2 111 57.7
SEGI_13624 Sequoiadendron giganteum HOM05D000228 ORTHO05D001545 1.8e-22 110.2 135 46.7
RcHm_v2.0_Chr2g0098331 Rosa chinensis HOM05D000228 ORTHO05D001545 1.2e-21 107.5 103 54.4
arahy.Tifrunner.gnm1.ann1.32E6CA Arachis hypogaea HOM05D000228 ORTHO05D001545 1.3e-20 104.0 170 41.8
Cre16.g680900 Chlamydomonas reinhardtii HOM05D000228 ORTHO05D001545 3.8e-20 102.4 134 40.3
arahy.Tifrunner.gnm1.ann1.248CB6 Arachis hypogaea HOM05D000228 ORTHO05D001545 1.6e-18 97.1 170 39.4
Psat2g151760 Pisum sativum HOM05D000228 ORTHO05D326346 4.0e-17 92.4 55 83.6
PRCOL_00006783 Prasinoderma coloniale HOM05D000228 ORTHO05D001545 6.8e-17 91.7 150 37.3
Cc07_g11340 Coffea canephora HOM05D000228 ORTHO05D001545 5.7e-16 88.6 49 79.6
Cc08_g04850 Coffea canephora HOM05D000228 ORTHO05D001545 5.7e-16 88.6 49 79.6
QL06p052095 Quercus lobata HOM05D000228 ORTHO05D001545 1.6e-10 70.5 40 77.5
Cfa021868 Carpinus fangiana HOM05D000228 ORTHO05D001545 1.2e-08 64.3 87 40.2
MD02G1125900 Malus domestica HOM05D000228 ORTHO05D001545 8.3e-07 58.2 69 47.8
Ciclev10001675m.g Citrus clementina HOM05D000228 ORTHO05D001545 1.4e-06 57.4 128 35.9
CSS0008034 Camellia sinensis var. sinensis HOM05D000489 ORTHO05D000372 2.4e-06 56.6 59 54.2
AagrBONN_evm.TU.Sc2ySwM_362.2196 Anthoceros agrestis HOM05D000228 ORTHO05D001545 9.2e-06 54.7 124 32.3


User provided reference genes

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